mirror of
https://github.com/NGSolve/netgen.git
synced 2024-12-26 05:50:32 +05:00
move parallel files
This commit is contained in:
parent
1fc0ec21cd
commit
4f6f77f2f3
@ -2,5 +2,4 @@ AM_CPPFLAGS =
|
|||||||
|
|
||||||
METASOURCES = AUTO
|
METASOURCES = AUTO
|
||||||
|
|
||||||
SUBDIRS = csg general geom2d gprim include interface linalg meshing occ \
|
SUBDIRS = csg general geom2d gprim include interface linalg meshing occ stlgeom visualization
|
||||||
parallel stlgeom visualization
|
|
||||||
|
@ -216,9 +216,7 @@ top_builddir = @top_builddir@
|
|||||||
top_srcdir = @top_srcdir@
|
top_srcdir = @top_srcdir@
|
||||||
AM_CPPFLAGS =
|
AM_CPPFLAGS =
|
||||||
METASOURCES = AUTO
|
METASOURCES = AUTO
|
||||||
SUBDIRS = csg general geom2d gprim include interface linalg meshing occ \
|
SUBDIRS = csg general geom2d gprim include interface linalg meshing occ stlgeom visualization
|
||||||
parallel stlgeom visualization
|
|
||||||
|
|
||||||
all: all-recursive
|
all: all-recursive
|
||||||
|
|
||||||
.SUFFIXES:
|
.SUFFIXES:
|
||||||
|
@ -23,4 +23,5 @@ libmesh_la_SOURCES = adfront2.cpp adfront3.cpp bisect.cpp boundarylayer.cpp \
|
|||||||
pyramid2rls.cpp pyramidrls.cpp quadrls.cpp refine.cpp \
|
pyramid2rls.cpp pyramidrls.cpp quadrls.cpp refine.cpp \
|
||||||
ruler2.cpp ruler3.cpp secondorder.cpp smoothing2.5.cpp \
|
ruler2.cpp ruler3.cpp secondorder.cpp smoothing2.5.cpp \
|
||||||
smoothing2.cpp smoothing3.cpp specials.cpp tetrarls.cpp \
|
smoothing2.cpp smoothing3.cpp specials.cpp tetrarls.cpp \
|
||||||
topology.cpp triarls.cpp validate.cpp zrefine.cpp
|
topology.cpp triarls.cpp validate.cpp zrefine.cpp \
|
||||||
|
parallelmesh.cpp paralleltop.cpp paralleltop.hpp
|
||||||
|
@ -57,7 +57,8 @@ am_libmesh_la_OBJECTS = adfront2.lo adfront3.lo bisect.lo \
|
|||||||
prism2rls.lo pyramid2rls.lo pyramidrls.lo quadrls.lo refine.lo \
|
prism2rls.lo pyramid2rls.lo pyramidrls.lo quadrls.lo refine.lo \
|
||||||
ruler2.lo ruler3.lo secondorder.lo smoothing2.5.lo \
|
ruler2.lo ruler3.lo secondorder.lo smoothing2.5.lo \
|
||||||
smoothing2.lo smoothing3.lo specials.lo tetrarls.lo \
|
smoothing2.lo smoothing3.lo specials.lo tetrarls.lo \
|
||||||
topology.lo triarls.lo validate.lo zrefine.lo
|
topology.lo triarls.lo validate.lo zrefine.lo parallelmesh.lo \
|
||||||
|
paralleltop.lo
|
||||||
libmesh_la_OBJECTS = $(am_libmesh_la_OBJECTS)
|
libmesh_la_OBJECTS = $(am_libmesh_la_OBJECTS)
|
||||||
DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)
|
DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)
|
||||||
depcomp = $(SHELL) $(top_srcdir)/depcomp
|
depcomp = $(SHELL) $(top_srcdir)/depcomp
|
||||||
@ -71,6 +72,15 @@ CXXLD = $(CXX)
|
|||||||
CXXLINK = $(LIBTOOL) --tag=CXX $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
|
CXXLINK = $(LIBTOOL) --tag=CXX $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
|
||||||
--mode=link $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) $(AM_LDFLAGS) \
|
--mode=link $(CXXLD) $(AM_CXXFLAGS) $(CXXFLAGS) $(AM_LDFLAGS) \
|
||||||
$(LDFLAGS) -o $@
|
$(LDFLAGS) -o $@
|
||||||
|
COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
|
||||||
|
$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
|
||||||
|
LTCOMPILE = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
|
||||||
|
--mode=compile $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) \
|
||||||
|
$(AM_CPPFLAGS) $(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
|
||||||
|
CCLD = $(CC)
|
||||||
|
LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) $(LIBTOOLFLAGS) \
|
||||||
|
--mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) $(AM_LDFLAGS) \
|
||||||
|
$(LDFLAGS) -o $@
|
||||||
SOURCES = $(libmesh_la_SOURCES)
|
SOURCES = $(libmesh_la_SOURCES)
|
||||||
DIST_SOURCES = $(libmesh_la_SOURCES)
|
DIST_SOURCES = $(libmesh_la_SOURCES)
|
||||||
HEADERS = $(noinst_HEADERS)
|
HEADERS = $(noinst_HEADERS)
|
||||||
@ -254,7 +264,8 @@ libmesh_la_SOURCES = adfront2.cpp adfront3.cpp bisect.cpp boundarylayer.cpp \
|
|||||||
pyramid2rls.cpp pyramidrls.cpp quadrls.cpp refine.cpp \
|
pyramid2rls.cpp pyramidrls.cpp quadrls.cpp refine.cpp \
|
||||||
ruler2.cpp ruler3.cpp secondorder.cpp smoothing2.5.cpp \
|
ruler2.cpp ruler3.cpp secondorder.cpp smoothing2.5.cpp \
|
||||||
smoothing2.cpp smoothing3.cpp specials.cpp tetrarls.cpp \
|
smoothing2.cpp smoothing3.cpp specials.cpp tetrarls.cpp \
|
||||||
topology.cpp triarls.cpp validate.cpp zrefine.cpp
|
topology.cpp triarls.cpp validate.cpp zrefine.cpp \
|
||||||
|
parallelmesh.cpp paralleltop.cpp paralleltop.hpp
|
||||||
|
|
||||||
all: all-am
|
all: all-am
|
||||||
|
|
||||||
@ -331,6 +342,8 @@ distclean-compile:
|
|||||||
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/msghandler.Plo@am__quote@
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/msghandler.Plo@am__quote@
|
||||||
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/netrule2.Plo@am__quote@
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/netrule2.Plo@am__quote@
|
||||||
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/netrule3.Plo@am__quote@
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/netrule3.Plo@am__quote@
|
||||||
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/parallelmesh.Plo@am__quote@
|
||||||
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/paralleltop.Plo@am__quote@
|
||||||
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/parser2.Plo@am__quote@
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/parser2.Plo@am__quote@
|
||||||
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/parser3.Plo@am__quote@
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/parser3.Plo@am__quote@
|
||||||
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/prism2rls.Plo@am__quote@
|
@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/prism2rls.Plo@am__quote@
|
||||||
|
@ -67,7 +67,7 @@ namespace netgen
|
|||||||
#include "validate.hpp"
|
#include "validate.hpp"
|
||||||
|
|
||||||
#ifdef PARALLEL
|
#ifdef PARALLEL
|
||||||
#include "../parallel/paralleltop.hpp"
|
#include "paralleltop.hpp"
|
||||||
// #include "../parallel/parallelmesh.hpp"
|
// #include "../parallel/parallelmesh.hpp"
|
||||||
#endif
|
#endif
|
||||||
|
|
||||||
|
1910
libsrc/meshing/parallelmesh.cpp
Normal file
1910
libsrc/meshing/parallelmesh.cpp
Normal file
File diff suppressed because it is too large
Load Diff
1701
libsrc/meshing/paralleltop.cpp
Normal file
1701
libsrc/meshing/paralleltop.cpp
Normal file
File diff suppressed because it is too large
Load Diff
269
libsrc/meshing/paralleltop.hpp
Normal file
269
libsrc/meshing/paralleltop.hpp
Normal file
@ -0,0 +1,269 @@
|
|||||||
|
#ifndef FILE_PARALLELTOP
|
||||||
|
#define FILE_PARALLELTOP
|
||||||
|
|
||||||
|
#include <meshing.hpp>
|
||||||
|
|
||||||
|
extern int ntasks;
|
||||||
|
|
||||||
|
class ParallelMeshTopology
|
||||||
|
{
|
||||||
|
const Mesh & mesh;
|
||||||
|
|
||||||
|
// number of local elements, vertices, points (?), edges, faces
|
||||||
|
int ne, nv, np, ned, nfa;
|
||||||
|
|
||||||
|
// number of local segments and surface elements
|
||||||
|
int nseg, nsurfel;
|
||||||
|
|
||||||
|
// number of global elements, vertices, ???, faces
|
||||||
|
int neglob, nvglob;
|
||||||
|
int nparel;
|
||||||
|
int nfaglob;
|
||||||
|
|
||||||
|
/**
|
||||||
|
mapping from local to distant vertex number
|
||||||
|
each row of the table corresponds to one vertex
|
||||||
|
each row contains a list of pairs (procnr, dist_vnum)
|
||||||
|
*/
|
||||||
|
TABLE<int,PointIndex::BASE> loc2distvert;
|
||||||
|
TABLE<int,0> loc2distedge, loc2distface, loc2distel;
|
||||||
|
TABLE<int,0> loc2distsegm, loc2distsurfel;
|
||||||
|
|
||||||
|
BitArray * isexchangeface, * isexchangevert, * isexchangeedge, * isexchangeel;
|
||||||
|
|
||||||
|
BitArray isghostedge, isghostface;
|
||||||
|
|
||||||
|
bool coarseupdate;
|
||||||
|
int overlap;
|
||||||
|
|
||||||
|
public:
|
||||||
|
|
||||||
|
ParallelMeshTopology (const Mesh & amesh);
|
||||||
|
~ParallelMeshTopology ();
|
||||||
|
|
||||||
|
/// set number of local vertices, reset sizes of loc2dist_vert, isexchangevert...
|
||||||
|
void SetNV ( int anv );
|
||||||
|
void SetNE ( int ane );
|
||||||
|
void SetNSE ( int anse );
|
||||||
|
void SetNSegm ( int anseg );
|
||||||
|
|
||||||
|
void Reset ();
|
||||||
|
|
||||||
|
void SetLoc2Glob_Vert ( int locnum, int globnum ) { loc2distvert[locnum][0] = globnum; }
|
||||||
|
void SetLoc2Glob_VolEl ( int locnum, int globnum ) { loc2distel[locnum-1][0] = globnum; }
|
||||||
|
void SetLoc2Glob_SurfEl ( int locnum, int globnum ) { loc2distsurfel[locnum-1][0] = globnum; }
|
||||||
|
void SetLoc2Glob_Segm ( int locnum, int globnum ) { loc2distsegm[locnum-1][0] = globnum; }
|
||||||
|
|
||||||
|
int GetLoc2Glob_Vert ( int locnum ) const { return loc2distvert[locnum][0]; }
|
||||||
|
int GetLoc2Glob_VolEl ( int locnum ) const { return loc2distel[locnum-1][0]; }
|
||||||
|
|
||||||
|
void GetVertNeighbours ( int vnum, Array<int> & dests ) const;
|
||||||
|
|
||||||
|
int Glob2Loc_SurfEl ( int globnum );
|
||||||
|
int Glob2Loc_VolEl ( int globnum );
|
||||||
|
int Glob2Loc_Segm ( int globnum );
|
||||||
|
int Glob2Loc_Vert ( int globnum );
|
||||||
|
|
||||||
|
int GetNDistantPNums ( int locpnum ) const { return loc2distvert[locpnum].Size() / 2 + 1; }
|
||||||
|
int GetNDistantFaceNums ( int locfacenum ) const { return loc2distface[locfacenum-1].Size() / 2 + 1; }
|
||||||
|
int GetNDistantEdgeNums ( int locedgenum ) const { return loc2distedge[locedgenum-1].Size() / 2 + 1; }
|
||||||
|
int GetNDistantElNums ( int locelnum ) const { return loc2distel[locelnum-1].Size() / 2 + 1; }
|
||||||
|
|
||||||
|
int GetDistantPNum ( int proc, int locpnum ) const;
|
||||||
|
int GetDistantEdgeNum ( int proc, int locedgenum ) const;
|
||||||
|
int GetDistantFaceNum ( int proc, int locedgenum ) const;
|
||||||
|
int GetDistantElNum ( int proc, int locelnum ) const;
|
||||||
|
|
||||||
|
int GetDistantPNums ( int locpnum, int * distpnums ) const;
|
||||||
|
int GetDistantEdgeNums ( int locedgenum, int * distedgenums ) const;
|
||||||
|
int GetDistantFaceNums ( int locedgenum, int * distfacenums ) const;
|
||||||
|
int GetDistantElNums ( int locelnum, int * distfacenums ) const;
|
||||||
|
|
||||||
|
void Print() const;
|
||||||
|
|
||||||
|
void SetExchangeFace ( int fnr ) { isexchangeface->Set( (fnr-1)*(ntasks+1) ); }
|
||||||
|
void SetExchangeVert ( int vnum ) { isexchangevert->Set( (vnum-1)*(ntasks+1) ); }
|
||||||
|
void SetExchangeElement ( int elnum ) { isexchangeel->Set((elnum-1)*(ntasks+1) ); }
|
||||||
|
void SetExchangeEdge ( int ednum ) { isexchangeedge->Set ((ednum-1)*(ntasks+1)); }
|
||||||
|
|
||||||
|
|
||||||
|
// fuer diese Fkts kann man ja O(N) - bitarrays lassen
|
||||||
|
bool IsExchangeVert ( PointIndex vnum ) const
|
||||||
|
{
|
||||||
|
return loc2distvert[vnum].Size() > 1;
|
||||||
|
// return isexchangevert->Test((vnum-1)*(ntasks+1));
|
||||||
|
}
|
||||||
|
|
||||||
|
bool IsExchangeEdge ( int ednum ) const
|
||||||
|
{
|
||||||
|
/*
|
||||||
|
if ( isexchangeedge->Test( (ednum-1)*(ntasks+1) ) !=
|
||||||
|
( loc2distedge[ednum-1].Size() > 1) )
|
||||||
|
{
|
||||||
|
cerr << "isexedge differs, id = " << id << ", ednum = " << ednum << endl;
|
||||||
|
}
|
||||||
|
*/
|
||||||
|
// return loc2distedge[ednum-1].Size() > 1;
|
||||||
|
int i = (ednum-1)*(ntasks+1);
|
||||||
|
return isexchangeedge->Test(i);
|
||||||
|
}
|
||||||
|
|
||||||
|
bool IsExchangeFace ( int fnum ) const
|
||||||
|
{
|
||||||
|
/*
|
||||||
|
if ( isexchangeface->Test( (fnum-1)*(ntasks+1) ) !=
|
||||||
|
( loc2distface[fnum-1].Size() > 1) )
|
||||||
|
{
|
||||||
|
cerr << "it differs, id = " << id << ", fnum = " << fnum << endl;
|
||||||
|
}
|
||||||
|
*/
|
||||||
|
// nur hier funktioniert's so nicht ???? (JS)
|
||||||
|
// return loc2distface[fnum-1].Size() > 1;
|
||||||
|
return isexchangeface->Test( (fnum-1)*(ntasks+1) );
|
||||||
|
}
|
||||||
|
|
||||||
|
bool IsExchangeElement ( int elnum ) const
|
||||||
|
{
|
||||||
|
// return loc2distel[elnum-1].Size() > 1;
|
||||||
|
return isexchangeel->Test((elnum-1)*(ntasks+1));
|
||||||
|
}
|
||||||
|
|
||||||
|
bool IsExchangeSEl ( int selnum ) const
|
||||||
|
{
|
||||||
|
return loc2distsurfel[selnum-1].Size() > 1;
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
void SetExchangeFace (int dest, int fnr )
|
||||||
|
{
|
||||||
|
// isexchangeface->Set((fnr-1)*(ntasks+1) + (dest+1));
|
||||||
|
}
|
||||||
|
|
||||||
|
void SetExchangeVert (int dest, int vnum )
|
||||||
|
{
|
||||||
|
// isexchangevert->Set((vnum-1)*(ntasks+1) + (dest+1) );
|
||||||
|
}
|
||||||
|
|
||||||
|
void SetExchangeElement (int dest, int vnum )
|
||||||
|
{
|
||||||
|
isexchangeel->Set( (vnum-1)*(ntasks+1) + (dest+1) );
|
||||||
|
}
|
||||||
|
|
||||||
|
void SetExchangeEdge (int dest, int ednum )
|
||||||
|
{
|
||||||
|
// isexchangeedge->Set ( (ednum-1)*(ntasks+1) + (dest+1) );
|
||||||
|
}
|
||||||
|
|
||||||
|
|
||||||
|
bool IsExchangeVert (int dest, int vnum ) const
|
||||||
|
{
|
||||||
|
FlatArray<int> exchange = loc2distvert[vnum];
|
||||||
|
for (int i = 1; i < exchange.Size(); i += 2)
|
||||||
|
if (exchange[i] == dest) return true;
|
||||||
|
return false;
|
||||||
|
// return isexchangevert->Test((vnum-1)*(ntasks+1) + (dest+1) );
|
||||||
|
}
|
||||||
|
|
||||||
|
bool IsExchangeEdge (int dest, int ednum ) const
|
||||||
|
{
|
||||||
|
FlatArray<int> exchange = loc2distedge[ednum-1];
|
||||||
|
for (int i = 1; i < exchange.Size(); i += 2)
|
||||||
|
if (exchange[i] == dest) return true;
|
||||||
|
return false;
|
||||||
|
|
||||||
|
// return isexchangeedge->Test((ednum-1)*(ntasks+1) + (dest+1));
|
||||||
|
}
|
||||||
|
|
||||||
|
bool IsExchangeFace (int dest, int fnum ) const
|
||||||
|
{
|
||||||
|
FlatArray<int> exchange = loc2distface[fnum-1];
|
||||||
|
for (int i = 1; i < exchange.Size(); i += 2)
|
||||||
|
if (exchange[i] == dest) return true;
|
||||||
|
return false;
|
||||||
|
|
||||||
|
// return isexchangeface->Test((fnum-1)*(ntasks+1) + (dest+1) );
|
||||||
|
}
|
||||||
|
|
||||||
|
bool IsExchangeElement (int dest, int elnum ) const
|
||||||
|
{
|
||||||
|
// das geht auch nicht
|
||||||
|
/*
|
||||||
|
FlatArray<int> exchange = loc2distel[elnum-1];
|
||||||
|
for (int i = 1; i < exchange.Size(); i += 2)
|
||||||
|
if (exchange[i] == dest) return true;
|
||||||
|
return false;
|
||||||
|
*/
|
||||||
|
return isexchangeel->Test((elnum-1)*(ntasks+1) + (dest+1));
|
||||||
|
}
|
||||||
|
|
||||||
|
int Overlap() const
|
||||||
|
{ return overlap; }
|
||||||
|
|
||||||
|
int IncreaseOverlap ()
|
||||||
|
{ overlap++; return overlap; }
|
||||||
|
|
||||||
|
void Update();
|
||||||
|
|
||||||
|
void UpdateCoarseGrid();
|
||||||
|
void UpdateCoarseGridOverlap();
|
||||||
|
void UpdateRefinement ();
|
||||||
|
void UpdateTopology ();
|
||||||
|
void UpdateExchangeElements();
|
||||||
|
|
||||||
|
void UpdateCoarseGridGlobal();
|
||||||
|
|
||||||
|
bool DoCoarseUpdate() const
|
||||||
|
{ return !coarseupdate; }
|
||||||
|
|
||||||
|
|
||||||
|
void SetDistantFaceNum ( int dest, int locnum, int distnum );
|
||||||
|
void SetDistantPNum ( int dest, int locnum, int distnum );
|
||||||
|
void SetDistantEdgeNum ( int dest, int locnum, int distnum );
|
||||||
|
void SetDistantEl ( int dest, int locnum, int distnum );
|
||||||
|
void SetDistantSurfEl ( int dest, int locnum, int distnum );
|
||||||
|
void SetDistantSegm ( int dest, int locnum, int distnum );
|
||||||
|
|
||||||
|
bool IsGhostEl ( int elnum ) const { return mesh.VolumeElement(elnum).IsGhost(); }
|
||||||
|
bool IsGhostFace ( int fanum ) const { return isghostface.Test(fanum-1); }
|
||||||
|
bool IsGhostEdge ( int ednum ) const { return isghostedge.Test(ednum-1); }
|
||||||
|
bool IsGhostVert ( int pnum ) const { return mesh.Point(pnum).IsGhost(); }
|
||||||
|
|
||||||
|
// inline void SetGhostVert ( const int pnum )
|
||||||
|
// { isghostvert.Set(pnum-1); }
|
||||||
|
|
||||||
|
void SetGhostEdge ( int ednum )
|
||||||
|
{ isghostedge.Set(ednum-1); }
|
||||||
|
|
||||||
|
void ClearGhostEdge ( int ednum )
|
||||||
|
{ isghostedge.Clear(ednum-1); }
|
||||||
|
|
||||||
|
void SetGhostFace ( int fanum )
|
||||||
|
{ isghostface.Set(fanum-1); }
|
||||||
|
|
||||||
|
void ClearGhostFace ( int fanum )
|
||||||
|
{ isghostface.Clear(fanum-1); }
|
||||||
|
|
||||||
|
bool IsElementInPartition ( int elnum, int dest ) const
|
||||||
|
{
|
||||||
|
return IsExchangeElement ( dest, elnum);
|
||||||
|
}
|
||||||
|
|
||||||
|
void SetElementInPartition ( int elnum, int dest )
|
||||||
|
{
|
||||||
|
SetExchangeElement ( dest, elnum );
|
||||||
|
}
|
||||||
|
|
||||||
|
void SetNVGlob ( int anvglob ) { nvglob = anvglob; }
|
||||||
|
void SetNEGlob ( int aneglob ) { neglob = aneglob; }
|
||||||
|
|
||||||
|
int GetNVGlob () { return nvglob; }
|
||||||
|
int GetNEGlob () { return neglob; }
|
||||||
|
};
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
#endif
|
Loading…
Reference in New Issue
Block a user