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Merge remote-tracking branch 'origin/master' into parallel_meshing

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This commit is contained in:
Matthias Hochsteger 2021-06-28 12:08:38 +02:00
commit 55ab122f35
3 changed files with 109 additions and 26 deletions
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69
libsrc/core/archive.hpp
View File

@ -10,6 +10,7 @@
#include <memory> // for shared_ptr
#include <string> // for string
#include <type_traits> // for declval, enable_if_t, false_type, is_co...
#include <cstddef> // for std::byte
#include <typeinfo> // for type_info
#include <utility> // for move, swap, pair
#include <vector> // for vector
@ -93,6 +94,17 @@ namespace ngcore
template<typename T>
constexpr bool is_archivable = detail::is_Archivable_struct<T>::value;
template <typename T, typename ... Trest>
constexpr size_t TotSize ()
{
if constexpr (sizeof...(Trest) == 0)
return sizeof(T);
else
return sizeof(T) + TotSize<Trest...> ();
}
// Base Archive class
class NGCORE_API Archive
{
@ -307,6 +319,55 @@ namespace ngcore
val.DoArchive(*this); return *this;
}
// pack elements to binary
template <typename ... Types>
Archive & DoPacked (Types & ... args)
{
if (true) // (isbinary)
{
constexpr size_t totsize = TotSize<Types...>(); // (args...);
std::byte mem[totsize];
if (is_output)
{
CopyToBin (&mem[0], args...);
Do(&mem[0], totsize);
}
else
{
Do(&mem[0], totsize);
CopyFromBin (&mem[0], args...);
}
}
// else
// cout << "DoPacked of non-binary called --> individual pickling" << endl;
return *this;
}
template <typename T, typename ... Trest>
constexpr void CopyToBin (std::byte * ptr, T & first, Trest & ...rest) const
{
memcpy (ptr, &first, sizeof(first));
CopyToBin(ptr+sizeof(first), rest...);
}
constexpr void CopyToBin (std::byte * ptr) const { }
template <typename T, typename ... Trest>
constexpr void CopyFromBin (std::byte * ptr, T & first, Trest & ...rest) const
{
memcpy (&first, ptr, sizeof(first));
CopyFromBin(ptr+sizeof(first), rest...);
}
constexpr void CopyFromBin (std::byte * ptr) const { }
// Archive shared_ptrs =================================================
template <typename T>
Archive& operator & (std::shared_ptr<T>& ptr)
@ -705,6 +766,7 @@ namespace ngcore
{ return Write(i); }
Archive & operator & (bool & b) override
{ return Write(b); }
Archive & operator & (std::string & str) override
{
int len = str.length();
@ -731,6 +793,11 @@ namespace ngcore
ptr = 0;
}
}
Archive & Do (std::byte * d, size_t n) override
{
FlushBuffer();
stream->write(reinterpret_cast<char*>(d), n*sizeof(std::byte)); return *this;
}
private:
template <typename T>
@ -808,6 +875,8 @@ namespace ngcore
return *this;
}
Archive & Do (std::byte * d, size_t n) override
{ stream->read(reinterpret_cast<char*>(d), n*sizeof(std::byte)); return *this; } // NOLINT
Archive & Do (double * d, size_t n) override
{ stream->read(reinterpret_cast<char*>(d), n*sizeof(double)); return *this; } // NOLINT
Archive & Do (int * i, size_t n) override

20
libsrc/meshing/meshtype.cpp
View File

@ -1124,26 +1124,6 @@ namespace netgen
is_curved = typ != TET; // false;
}
void Element :: DoArchive (Archive & ar)
{
short _np, _typ;
bool _curved;
if (ar.Output())
{ _np = np; _typ = typ; _curved = is_curved; }
ar & _np;
// placement new to init flags
if (ar.Input())
new (this) Element(_np);
ar & _typ & index & _curved;
typ = ELEMENT_TYPE(_typ);
is_curved = _curved;
static_assert(sizeof(int) == sizeof (PointIndex));
ar.Do( (int*)&pnum[0], np);
}
void Element :: SetOrder (const int aorder)
{
orderx = aorder;

44
libsrc/meshing/meshtype.hpp
View File

@ -378,9 +378,10 @@ namespace netgen
void DoArchive (Archive & ar)
{
// ar & x[0] & x[1] & x[2] & layer & singular;
ar.Do(&x[0], 3);
ar & layer & singular;
ar & (unsigned char&)(type);
// ar.Do(&x[0], 3);
// ar & layer & singular;
// ar & (unsigned char&)(type);
ar.DoPacked (x[0], x[1], x[2], layer, singular, (unsigned char&)(type));
}
};
@ -558,13 +559,18 @@ namespace netgen
if (ar.Output())
{ _np = np; _typ = typ; _curved = is_curved;
_vis = visible; _deleted = deleted; }
ar & _np & _typ & index & _curved & _vis & _deleted;
// ar & _np & _typ & index & _curved & _vis & _deleted;
ar.DoPacked (_np, _typ, index, _curved, _vis, _deleted);
// ar & next; don't need
if (ar.Input())
{ np = _np; typ = ELEMENT_TYPE(_typ); is_curved = _curved;
visible = _vis; deleted = _deleted; }
/*
for (size_t i = 0; i < np; i++)
ar & pnum[i];
*/
static_assert(sizeof(int) == sizeof (PointIndex));
ar.Do( (int*)&pnum[0], np);
}
#ifdef PARALLEL
@ -838,7 +844,35 @@ namespace netgen
///
const PointIndex & PNumMod (int i) const { return pnum[(i-1) % np]; }
void DoArchive (Archive & ar);
void DoArchive (Archive & ar)
{
short _np, _typ;
bool _curved;
if (ar.Output())
{ _np = np; _typ = typ; _curved = is_curved; }
// ar & _np & _typ & index & _curved;
ar.DoPacked (_np, _typ, index, _curved);
if (ar.Input())
{
np = _np;
typ = ELEMENT_TYPE(_typ);
is_curved = _curved;
flags.marked = 1;
flags.badel = 0;
flags.reverse = 0;
flags.illegal = 0;
flags.illegal_valid = 0;
flags.badness_valid = 0;
flags.refflag = 1;
flags.strongrefflag = false;
flags.deleted = 0;
flags.fixed = 0;
}
static_assert(sizeof(int) == sizeof (PointIndex));
ar.Do( (int*)&pnum[0], np);
}
#ifdef PARALLEL
static MPI_Datatype MyGetMPIType();