parallel SplitImprove

This commit is contained in:
Matthias Hochsteger 2019-10-25 14:57:00 +02:00
parent 4d116f622c
commit 63aab9076c
3 changed files with 983 additions and 740 deletions

View File

@ -527,6 +527,246 @@ void MeshOptimize3d :: CombineImprove (Mesh & mesh,
double MeshOptimize3d :: SplitImproveEdge (Mesh & mesh, OPTIMIZEGOAL goal, Table<ElementIndex,PointIndex> & elementsonnode, Array<double> &elerrs, NgArray<INDEX_3> &locfaces, double badmax, PointIndex pi1, PointIndex pi2, PointIndex ptmp, bool check_only)
{
double d_badness = 0.0;
int cnt = 0;
ArrayMem<ElementIndex, 20> hasbothpoints;
if (mesh.BoundaryEdge (pi1, pi2)) return 0.0;
for (ElementIndex ei : elementsonnode[pi1])
{
Element & el = mesh[ei];
if(el.IsDeleted()) return 0.0;
if (mesh[ei].GetType() != TET) return 0.0;
bool has1 = el.PNums().Contains(pi1);
bool has2 = el.PNums().Contains(pi2);
if (has1 && has2)
if (!hasbothpoints.Contains (ei))
hasbothpoints.Append (ei);
}
if(mp.only3D_domain_nr)
for(auto ei : hasbothpoints)
if(mp.only3D_domain_nr != mesh[ei].GetIndex())
return 0.0;
double bad1 = 0.0;
for (ElementIndex ei : hasbothpoints)
bad1 += CalcBad (mesh.Points(), mesh[ei], 0);
bool puretet = 1;
for (ElementIndex ei : hasbothpoints)
if (mesh[ei].GetType() != TET)
puretet = 0;
if (!puretet) return 0.0;
Point3d p1 = mesh[pi1];
Point3d p2 = mesh[pi2];
locfaces.SetSize(0);
for (ElementIndex ei : hasbothpoints)
{
const Element & el = mesh[ei];
for (int l = 0; l < 4; l++)
if (el[l] == pi1 || el[l] == pi2)
{
INDEX_3 i3;
Element2d face(TRIG);
el.GetFace (l+1, face);
for (int kk = 1; kk <= 3; kk++)
i3.I(kk) = face.PNum(kk);
locfaces.Append (i3);
}
}
PointFunction1 pf (mesh.Points(), locfaces, mp, -1);
OptiParameters par;
par.maxit_linsearch = 50;
par.maxit_bfgs = 20;
Point3d pnew = Center (p1, p2);
Vector px(3);
px(0) = pnew.X();
px(1) = pnew.Y();
px(2) = pnew.Z();
if (bad1 > 0.1 * badmax)
BFGS (px, pf, par);
double bad2 = pf.Func (px);
pnew.X() = px(0);
pnew.Y() = px(1);
pnew.Z() = px(2);
mesh[ptmp] = Point<3>(pnew);
for (int k = 0; k < hasbothpoints.Size(); k++)
{
Element & oldel = mesh[hasbothpoints[k]];
Element newel1 = oldel;
Element newel2 = oldel;
oldel.flags.illegal_valid = 0;
newel1.flags.illegal_valid = 0;
newel2.flags.illegal_valid = 0;
for (int l = 0; l < 4; l++)
{
if (newel1[l] == pi2) newel1[l] = ptmp;
if (newel2[l] == pi1) newel2[l] = ptmp;
}
if (!mesh.LegalTet (oldel)) bad1 += 1e6;
if (!mesh.LegalTet (newel1)) bad2 += 1e6;
if (!mesh.LegalTet (newel2)) bad2 += 1e6;
}
d_badness = bad2-bad1;
if(check_only)
return d_badness;
if (d_badness<0.0)
{
cnt++;
PointIndex pinew = mesh.AddPoint (pnew);
for (ElementIndex ei : hasbothpoints)
{
Element & oldel = mesh[ei];
Element newel1 = oldel;
Element newel2 = oldel;
oldel.flags.illegal_valid = 0;
oldel.Delete();
newel1.flags.illegal_valid = 0;
newel2.flags.illegal_valid = 0;
for (int l = 0; l < 4; l++)
{
if (newel1[l] == pi2) newel1[l] = pinew;
if (newel2[l] == pi1) newel2[l] = pinew;
}
mesh.AddVolumeElement (newel1);
mesh.AddVolumeElement (newel2);
}
}
return d_badness;
}
void MeshOptimize3d :: SplitImprove (Mesh & mesh,
OPTIMIZEGOAL goal)
{
static Timer t("MeshOptimize3d::SplitImprove"); RegionTimer reg(t);
static Timer topt("Optimize");
static Timer tsearch("Search");
// return SplitImproveSequential(mesh, goal);
int np = mesh.GetNP();
int ne = mesh.GetNE();
double bad = 0.0;
double badmax = 0.0;
auto elementsonnode = mesh.CreatePoint2ElementTable();
Array<double> elerrs(ne);
const char * savetask = multithread.task;
multithread.task = "Split Improve";
PrintMessage (3, "SplitImprove");
(*testout) << "start SplitImprove" << "\n";
ParallelFor( mesh.VolumeElements().Range(), [&] (ElementIndex ei) NETGEN_LAMBDA_INLINE
{
if(mp.only3D_domain_nr && mp.only3D_domain_nr != mesh.VolumeElement(ei).GetIndex())
return;
elerrs[ei] = CalcBad (mesh.Points(), mesh[ei], 0);
bad += elerrs[ei];
AtomicMax(badmax, elerrs[ei]);
});
if (goal == OPT_QUALITY)
{
bad = mesh.CalcTotalBad (mp);
(*testout) << "Total badness = " << bad << endl;
}
Array<std::tuple<PointIndex,PointIndex>> edges;
BuildEdgeList(mesh, elementsonnode, edges);
// Find edges with improvement
Array<std::tuple<double, int>> candidate_edges(edges.Size());
std::atomic<int> improvement_counter(0);
auto ptmp = mesh.AddPoint( {0,0,0} );
tsearch.Start();
ParallelForRange(Range(edges), [&] (auto myrange)
{
NgArray<INDEX_3> locfaces;
for(auto i : myrange)
{
auto [p0,p1] = edges[i];
double d_badness = SplitImproveEdge (mesh, goal, elementsonnode, elerrs, locfaces, badmax, p0, p1, ptmp, true);
if(d_badness<0.0)
{
int index = improvement_counter++;
candidate_edges[index] = make_tuple(d_badness, i);
}
}
}, ngcore::TasksPerThread(4));
tsearch.Stop();
auto edges_with_improvement = candidate_edges.Part(0, improvement_counter.load());
QuickSort(edges_with_improvement);
PrintMessage(5, edges.Size(), " edges");
PrintMessage(5, edges_with_improvement.Size(), " edges with improvement");
// Apply actual optimizations
topt.Start();
int cnt = 0;
NgArray<INDEX_3> locfaces;
for(auto [d_badness, ei] : edges_with_improvement)
{
auto [p0,p1] = edges[ei];
if (SplitImproveEdge (mesh, goal, elementsonnode, elerrs, locfaces, badmax, p0, p1, ptmp, false) < 0.0)
cnt++;
}
topt.Stop();
mesh.Compress();
PrintMessage (5, cnt, " splits performed");
(*testout) << "Splitt - Improve done" << "\n";
if (goal == OPT_QUALITY)
{
bad = mesh.CalcTotalBad (mp);
(*testout) << "Total badness = " << bad << endl;
int cntill = 0;
ne = mesh.GetNE();
for (ElementIndex ei = 0; ei < ne; ei++)
if (!mesh.LegalTet (mesh[ei]))
cntill++;
// cout << cntill << " illegal tets" << endl;
}
multithread.task = savetask;
}
/*
@ -534,7 +774,7 @@ void MeshOptimize3d :: CombineImprove (Mesh & mesh,
If mesh quality is improved by inserting a node into an inner edge,
the edge is split into two parts.
*/
void MeshOptimize3d :: SplitImprove (Mesh & mesh,
void MeshOptimize3d :: SplitImproveSequential (Mesh & mesh,
OPTIMIZEGOAL goal)
{
static Timer t("MeshOptimize3d::SplitImprove"); RegionTimer reg(t);

View File

@ -24,6 +24,9 @@ public:
void CombineImproveSequential (Mesh & mesh, OPTIMIZEGOAL goal = OPT_QUALITY);
void SplitImprove (Mesh & mesh, OPTIMIZEGOAL goal = OPT_QUALITY);
void SplitImproveSequential (Mesh & mesh, OPTIMIZEGOAL goal = OPT_QUALITY);
double SplitImproveEdge (Mesh & mesh, OPTIMIZEGOAL goal, Table<ElementIndex,PointIndex> & elementsonnode, Array<double> &elerrs, NgArray<INDEX_3> &locfaces, double badmax, PointIndex pi1, PointIndex pi2, PointIndex ptmp, bool check_only=false);
double SwapImproveEdge (Mesh & mesh, OPTIMIZEGOAL goal, const NgBitArray * working_elements, Table<ElementIndex,PointIndex> & elementsonnode, INDEX_3_HASHTABLE<int> & faces, PointIndex pi1, PointIndex pi2, bool check_only=false);
void SwapImprove (Mesh & mesh, OPTIMIZEGOAL goal = OPT_QUALITY,

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