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1216 Commits

Author SHA1 Message Date
Joachim Schöberl
aa13a2fbb4 Merge branch 'export_timestamp' into 'master' 
export mesh timestamp to python

See merge request jschoeberl/netgen!84
 2018-05-14 18:52:28 +02:00
Christopher Lackner
375460b75d change timestamp to python private convention 2018-05-14 11:01:27 +02:00
Joachim Schöberl
d9219e6f05 picking geometry with mesh (CSG only by now) 2018-05-12 09:16:02 +02:00
Christopher Lackner
8e73ba68fc export mesh timestamp to python 2018-05-11 10:53:03 +02:00
Joachim Schöberl
ec1bcd8799 too many dll_header 2018-05-01 21:26:47 +02:00
Joachim Schöberl
66ef426c79 Curve mesh functionality over Ngx_Mesh 2018-05-01 21:20:54 +02:00
Joachim Schöberl
1629d6bf69 visualize deformation of 1d elements 2018-04-30 18:41:19 +02:00
Joachim Schöberl
5a320121fd move DoArchive to cpp-file 2018-04-28 12:07:57 +02:00
Joachim Schöberl
8522cfdac5 fix for msvc ???? 2018-04-28 11:53:24 +02:00
Joachim Schöberl
0b0616eee8 bug fix table archive 2018-04-28 10:34:46 +02:00
Joachim Schöberl
bda771f86f more archive 2018-04-28 03:42:04 +02:00
Joachim Schöberl
f85b51496f persistent archiving of pointers 2018-04-27 22:34:25 +02:00
Joachim Schöberl
633376972f archiving the mesh 2018-04-27 08:36:22 +02:00
Joachim Schöberl
a985a7bfb1 Merge branch 'curvemanualmeshes' into 'master' 
modify PointBetween for manually generated meshes

See merge request jschoeberl/netgen!83
 2018-04-26 12:31:43 +02:00
Joachim Schöberl
e72d90fcbb Merge branch 'derive_geos_netgengeometry' into 'master' 
derive geometry class in python from NetgenGeometry, gil call guard

See merge request jschoeberl/netgen!82
 2018-04-18 22:00:03 +02:00
Christoph Wintersteiger
ef80db781a modify PointBetween for manually generated meshes 2018-04-18 09:34:41 +02:00
Christopher Lackner
bc520769ba derive geometry class in python from NetgenGeometry, gil call guard 
for generatemesh in 2d
 2018-04-17 19:37:29 +02:00
Matthias Hochsteger
df71d00d21 GetParent*() functions in nginterface_v2 2018-03-20 19:14:07 +01:00
Joachim Schöberl
b151c9d7da int to MyStr 2018-03-15 19:19:48 +01:00
Joachim Schöberl
edf7861ee3 size_t for Array size 2018-03-15 19:01:32 +01:00
Joachim Schöberl
73a5381d2e virtual dtro in Archive 2018-03-15 19:01:32 +01:00
Joachim Schoeberl
98dab9ca7c fix mpi send 2018-03-14 11:42:22 +01:00
Christopher Lackner
96f9e01aba release GIL in expensive functions 2018-03-12 22:38:21 +01:00
Joachim Schöberl
07b84024ca enable tables to disable edge/face generation if not needed 2018-03-11 16:28:43 +01:00
Joachim Schöberl
777b5ed216 fix Periodic with trafo 2018-03-11 16:27:58 +01:00
Joachim Schöberl
aa8dbac6be export Trafo to py, IdentifyPeriodic with Trafo 2018-03-09 15:29:50 +01:00
Joachim Schöberl
ee7ac2e0a0 fix warnings 2018-03-08 23:47:58 +01:00
Joachim Schöberl
7c1cee3817 fix warnings 2018-03-08 22:31:00 +01:00
Joachim Schöberl
5de403ffd8 py::init constructors 2018-03-08 22:19:11 +01:00
Joachim Schöberl
cf0d3f6682 fix warnings 2018-03-08 21:36:34 +01:00
Christopher Lackner
bdfbf14a39 fix segfault on query non set boundary name in 2D 2018-03-08 14:46:34 +01:00
Christopher Lackner
522aa25e3f export elliptic cone to python 2018-02-26 15:22:35 +01:00
Josephat Kalezhi
b6705eba14 add elliptic cone csg primitive 2018-02-26 14:08:22 +01:00
Matthias Hochsteger
162b422e48 Better distribution for hash values in ClosedHashTable 2018-02-20 12:35:22 +01:00
luz.paz
a10531adb2 Misc. typos 
Found via `codespell -q 3`
 2018-02-06 14:12:24 -05:00
Matthias Hochsteger
90dee5fde4 Define PACKAGE_VERSION in mydefs.hpp 
Change "PACKAGE_VERSION" to "NETGEN_VERSION" in NetgenConfig.cmake
 2018-02-02 11:22:08 +01:00
Joachim Schöberl
356fc6c42f Merge branch 'occ_init_mesh_ptr' into 'master' 
OCCGenerateMesh: Initialize mesh if nullptr is given

See merge request jschoeberl/netgen!76
 2018-01-25 18:52:09 +01:00
Matthias Hochsteger
c48084fd1c Fix build error on GCC 4.8 
by avoiding the copy constructor of std::ifstream
 2018-01-25 11:29:24 +01:00
Matthias Hochsteger
d77ec67b9f OCCGenerateMesh: Initialize mesh if nullptr is given 2018-01-24 10:53:34 +01:00
Christopher Lackner
301ba176e5 Python export of second order trigs 2018-01-23 16:45:20 +01:00
looooo
e16c76c7b3 occt7.2.0: some diff to make netgen work with occt7.2.0 2018-01-23 03:05:38 -08:00
Matthias Hochsteger
0b411e1b07 install mydefs.hpp, some DLL_HEADER 
Includes parts of pull request by looooo
https://github.com/NGSolve/netgen/pull/4
 2018-01-23 03:03:47 -08:00
Joachim Schöberl
9d3360a9a2 singular edges and points in CS-Geometry 2018-01-22 10:44:14 +01:00
luz.paz
58002505bc Typos 
Found via `codespell`
 2018-01-14 12:18:54 -05:00
Joachim Schöberl
d2c70117cc fix ClosedSurface 2018-01-14 08:01:57 +01:00
Joachim Schöberl
d75f4e79ce 64bit issue in Table allocation 2018-01-12 15:55:29 +01:00
Joachim Schöberl
3fffb78a20 more parallel in MeshTopology 2018-01-07 17:33:59 +01:00
Joachim Schöberl
5f2edca91c more parallel in UpdateTopology, optimize Clusters 2018-01-06 18:41:45 +01:00
Joachim Schöberl
19ec4fc9ca more tracing and parallelization 2018-01-04 18:45:07 +01:00
Joachim Schöberl
dca5a01e04 more parallel in topology 2018-01-04 13:00:01 +01:00
Joachim Schöberl
28c7bb27fc include atomic 2018-01-04 12:18:23 +01:00
Joachim Schöberl
789305c3bc more parallelism in netgen-topology 2018-01-04 11:48:45 +01:00
Joachim Schöberl
5469356147 tracer in Netgen 2018-01-04 10:43:34 +01:00
Unknown
afdc1ae85a Misc. typos 
More typo
 2017-12-09 22:21:40 -05:00
Michael Neunteufel
d6bb0844de ellipsoid export to python 2017-12-07 09:43:32 +01:00
Christopher Lackner
bcf5ea67aa GetGeometry from mesh 2017-12-06 14:16:52 +01:00
Joachim Schöberl
17c35f0640 fix simd<double,2> 2017-11-27 10:26:38 +01:00
Joachim Schöberl
25ba2f7a54 SSE - vectorization 2017-11-27 10:20:18 +01:00
Joachim Schöberl
3665e649d7 remove experimental timers, no TSC per default 2017-11-24 09:23:14 +01:00
Joachim Schöberl
38b7c2b8fa added template instantiation 2017-11-24 07:09:28 +01:00
Joachim Schöberl
7cf05d84a8 AVX512 for element-trafos 2017-11-23 21:26:36 +01:00
Joachim Schöberl
1d02f7f104 geometric search tree with hash-table 2017-11-13 11:58:13 +01:00
Joachim Schöberl
ff3c1a2c36 new closed hashtable with automatic increase 2017-11-13 11:58:13 +01:00
Joachim Schöberl
5dc501af26 optional use of tsc-counter 2017-11-13 11:58:13 +01:00
Joachim Schöberl
af57dd1b72 improve STL makeatlas: searchtree, templetize searchtree 2017-11-10 13:22:20 +01:00
Joachim Schöberl
d02bb9024e fix triangle generation rule (thx to TDM) 2017-11-07 11:36:54 +01:00
Joachim Schöberl
f1917aa2c4 Merge branch 'save_compressed_mesh' into 'master' 
check filename extension when saving a mesh

See merge request !57
 2017-11-06 17:03:31 +01:00
Christoph Wintersteiger
753c2280c0 add Heal function to the python interface with the same functionality as the "Heal Geometry" button in the gui 2017-11-03 17:44:14 +01:00
Christoph Wintersteiger
ccc092d2c5 save check of file ending 2017-10-30 13:43:01 +01:00
Joachim Schöberl
b269c9a2c9 Merge branch 'occfrompython' into 'master' 
Occfrompython

See merge request !67
 2017-10-30 13:05:08 +01:00
Joachim Schöberl
712e2c3fb4 Segment array with size_t indexing 2017-10-29 11:31:50 +01:00
Christoph Wintersteiger
df01ffcb5a setting occparms not necessary 2017-10-27 11:40:44 +02:00
Christoph Wintersteiger
ef4405c3d7 remove output 2017-10-25 15:47:27 +02:00
Christoph Wintersteiger
a90ee2e437 set occparams and generate triangulation with BRepMesh 2017-10-20 16:39:37 +02:00
Matthias Hochsteger
8f11b84911 Fix for MSVC 2017-10-17 11:02:39 +02:00
Matthias Hochsteger
949ead991f Update ngsimd.hpp 2017-10-17 10:32:59 +02:00
Joachim Schöberl
45912fba10 Merge branch 'export_python_calclocalh' into 'master' 
export CalcLocalH and SetMaxHDomain to Python

See merge request !65
 2017-10-12 16:17:55 +02:00
Christopher Lackner
2835597c21 export CalcLocalH and SetMaxHDomain to Python 2017-10-12 12:55:07 +02:00
Joachim Schöberl
60c80fe9fc use (double) factor for 2D hprefinement for strength of geometric refinement 2017-10-03 06:34:09 +02:00
Christoph Wintersteiger
20d6a12192 check extension of filename to ensure that the loading process is successful 2017-09-29 14:47:16 +02:00
Joachim Schöberl
aa97817d08 support of 0D-elements in CSG 2017-09-22 17:02:39 +02:00
Joachim Schöberl
ec39a51e92 assign default geometry in the (Python) mesh ctor 2017-09-22 17:02:39 +02:00
Matthias Hochsteger
042db258c8 Fix build with GUI=ON, MPI=ON 2017-09-21 17:58:38 +02:00
Joachim Schöberl
924edbb3ad fixes thanks to etromme 2017-09-14 13:50:29 +02:00
Christoph Wintersteiger
2e07ee9962 use grading for boundray partition and set default value for elto0 2017-09-13 18:33:59 +02:00
Joachim Schöberl
045a271c2e dshapes were not computed for SIMDs 2017-09-13 10:46:10 +02:00
Joachim Schöberl
cb9816c244 Add gmsh-import, pybind2.2 ctor for Mesh 2017-09-06 18:08:39 +02:00
Joachim Schöberl
89f41da33b had to add default constructor (for pybind update) 2017-09-02 23:08:20 +02:00
Joachim Schöberl
111f90939e init color, add transparent 2017-09-02 22:13:44 +02:00
Joachim Schöberl
e17939a95b Merge branch 'update_pybind11' into 'master' 
Update pybind11 to version 2.2.0

See merge request !60
 2017-09-02 22:09:34 +02:00
Matthias Hochsteger
1430b89e39 Update pybind11 to version 2.2.0 
- Replace PYBIND11_PLUGIN with PYBIND11_MODULE

- Fix warnings about symbol visibility by replacing
  'namespace pybind11' with 'namespace PYBIND11_NAMESPACE'

- Pybind sets the default visibility of its namespace to 'hidden'
  Thus, our export functions like  ExportCSG(py::module &m) also are
  hidden by default. To work around that define DLL_HEADER
  '__attribute__ ((visibility ("default")))
  on GNUC platforms.
 2017-09-01 10:16:56 +02:00
Joachim Schöberl
5de14c63a4 set color of CSG top-level object 2017-09-01 09:12:50 +02:00
Joachim Schöberl
7e83edabf1 order of d'tors for global variables: create VSSolution on demand, which is later 2017-08-28 18:19:20 +02:00
Joachim Schöberl
e33c859a43 delete global mesh the old way 2017-08-28 17:23:31 +02:00
Joachim Schöberl
74c8fa5cf4 little polish of bisect 2017-08-27 14:52:57 +02:00
Joachim Schöberl
6d39c78ffb close surfs with additional sub-domain 2017-08-27 14:52:11 +02:00
Joachim Schöberl
2d4bed6a77 fix crash at netgen exit 2017-08-27 14:51:35 +02:00
Matthias Hochsteger
d4a2d4c87b Check if mesh file exists before loading 
Also derive NgException from std::exception to print the error message
in Python / on the command line.
 2017-08-24 13:59:16 +02:00
Joachim Schöberl
a0485eece0 wasn't worth it 2017-08-17 20:58:08 +02:00
Joachim Schöberl
b20f428eae to make also gcc-6.3 happy 2017-08-17 20:35:35 +02:00
Joachim Schöberl
3955916ac5 atomic fix 2017-08-17 20:27:41 +02:00
Joachim Schöberl
463c564c98 atomic workaround 2017-08-17 20:24:03 +02:00
Joachim Schöberl
4fe9abcc0e atomic workaround 2017-08-17 20:20:30 +02:00
Joachim Schöberl
5f211234d1 thread-safe insertion of surface elements 2017-08-17 20:08:08 +02:00
Joachim Schöberl
a86c9d19e0 fix multidim in Netgen 2017-08-16 15:49:45 +02:00
Christopher Lackner
180ebbda92 delete edges with negative edgenr in mesh.Compress 2017-08-09 14:31:26 +02:00
Joachim Schöberl
408a3efb3c Merge branch 'fix_splinesurface' into 'master' 
fix splinesurface when points are not given exactly

See merge request !55
 2017-08-08 08:01:32 +02:00
Christopher Lackner
e910eb5613 fix splinesurface when points are not given exactly 2017-08-02 14:45:03 +02:00
Christopher Lackner
ad490200a0 fix import of neutral file format with multiple surface numbers 2017-08-01 10:15:07 +02:00
Joachim Schöberl
043e3403ba use geometry from mesh on export user format 2017-07-24 22:26:18 +02:00
Joachim Schöberl
046f473619 Merge branch 'master' of data.asc.tuwien.ac.at:jschoeberl/netgen 2017-07-24 21:49:59 +02:00
Joachim Schöberl
8377ab058d switch off creation of hexes per default 2017-07-24 21:49:49 +02:00
Bernd Schwarzenbacher
2a37793f72 Add 3 meshingparameters to python interface 2017-07-24 11:00:56 -04:00
Matthias Hochsteger
0fc62e7920 Some DLL_HEADERs for Windows 2017-07-19 11:26:12 -07:00
Joachim Schöberl
f2f3e92125 second order segments available for Python 2017-06-28 07:23:28 +02:00
Joachim Schöberl
792ff477be respect 2nd order segment when exporting neutral format 2017-06-28 00:16:56 +02:00
Joachim Schöberl
ee476e154d set MeshPoint coordinates 2017-06-26 23:26:09 +02:00
Joachim Schöberl
4cb120047c replace char* by string 2017-06-25 18:22:46 +02:00
Joachim Schöberl
5d62946130 Merge branch 'master' of data.asc.tuwien.ac.at:jschoeberl/netgen 2017-06-23 22:10:14 +02:00
Joachim Schöberl
4309c1c656 facets for 0D elements 2017-06-23 22:09:50 +02:00
Joachim Schöberl
584f4506a9 Merge branch 'par_fixes' into 'master' 
Par fixes

See merge request !51
 2017-06-21 09:31:12 +02:00
Lukas Kogler
4c0c5aac8c correctly use delete[] instead of delete in python_mesh.cpp 2017-06-20 10:27:26 +02:00
Joachim Schöberl
837e92bb16 set geometry (thx Lukas) 2017-06-12 12:33:20 +02:00
lkogler
1e9e376d2e prettied it all up a bit 2017-06-09 20:56:19 +02:00
Lukas Kogler
3c1596b8a0 Fixed curvedelems+mesh loaded from file via python. Fixed MPI+curvedelems 2017-06-09 20:21:55 +02:00
Lukas Kogler
7e21f0cd9c BC-and Material-names are now working with MPI. 2017-06-08 17:50:37 +02:00
Lukas Kogler
6524c0c170 Merged master 2017-06-06 10:11:41 +02:00
Lukas Kogler
2cc28a960e Removec some cout-output 2017-06-06 09:55:40 +02:00
Matthias Hochsteger
41e62e58a4 OCC: Set BC Names/Materials only when available 2017-06-02 14:15:31 +02:00
Christoph Wintersteiger
892b391ad3 add boundary condition and maxh to base of SplineSurface 2017-06-01 17:09:02 +02:00
Christoph Wintersteiger
7178cc1b73 fix MultiElementTransformation<1,3> for SIMD 2017-06-01 17:08:07 +02:00
Matthias Hochsteger
cb3af7ab55 Remove config.h 2017-06-01 10:15:25 +02:00
Joachim Schöberl
e8712aa8ae export Mesh.SecondOrder 2017-05-31 23:44:50 +02:00
Matthias Hochsteger
0c611c339c Python opencascade interface (by Gerhard Kitzler) 2017-05-31 19:39:09 +02:00
Joachim Schöberl
9324121953 smaller int-type for GetNV 2017-05-31 07:54:48 +02:00
Joachim Schöberl
a22e36f182 fix bug for debug output 2017-05-31 07:54:48 +02:00
Joachim Schöberl
feb74d49c2 use static class variable rather then static function variable 2017-05-31 07:54:47 +02:00
Joachim Schöberl
76e6aaecb1 use size_t to avoid int-narrowing 2017-05-31 07:54:47 +02:00
Matthias Hochsteger
f6a0b31b96 Cleanup CMake build system 
- Use CMAKE_INSTALL_PREFIX instead of INSTALL_DIR
  - Allow finer control of install directories
  - Use compiled TCL code by default
  - Fix RPATH usage on Linux and MacOSX

### Allow finer control of install directories
The following variables can be set to either absolute or relative paths
NG_INSTALL_DIR_PYTHON: Python files
NG_INSTALL_DIR_BIN: Executables
NG_INSTALL_DIR_LIB: Libraries
NG_INSTALL_DIR_INCLUDE: header files
NG_INSTALL_DIR_CMAKE: CMake files
NG_INSTALL_DIR_RES: Resources

### Use compiled TCL code by default
The tcl files contained in Netgen are stored in onetcl.cpp as c-string.
This way it's not necessary to install tcl files or set NETGENDIR

### Fix RPATH usage on Linux and MacOSX
The Netgen installation should be completely relocatable now.

Squashed commit of the following:

commit 201eda5e62726bd87d76beb13c3e5643cd4c7810
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 21:10:08 2017 +0200

    cleanup

commit b4cd46a9d2f390b40c5223c8d9971f576b979644
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 20:47:46 2017 +0200

    fix

commit 6506a834dbee2fd7b6df3b3f3709d0b27344356f
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 20:41:45 2017 +0200

    allow gui test to fail

commit 56c5fc131f61259e6fb67b60f7fff955d2e8d2da
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 20:26:18 2017 +0200

    add python3-tk to docker images

commit 4d1b5aac1d028867339819599708a08f2098bbd6
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 11:22:18 2017 -0700

    windows fix

commit 92b5f8a95491ba3508143d7f1b94359edc0655ce
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 11:08:08 2017 -0700

    fix for windows

commit 3f7bf51434ef3b637b3563930ddb61d04af645cb
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 19:28:13 2017 +0200

    fixes, test for gui

commit ef1d0164a50fadf374e3b1e43a745b5f69a16ad6
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 19:06:55 2017 +0200

    fixes

commit 67645bb896012149c23c851b03287199c21fa129
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 17:24:58 2017 +0200

    netgen config

commit b587b77a282768719cffc366c56d82a1746e0be0
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 16:53:47 2017 +0200

    remove comments

commit 2b34cc78818afa1cf21484bd0976413a91db0851
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 05:03:00 2017 -0700

    fix windows

commit 9e98efa54065624e264eaf1acf74b44ef022a68d
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 13:42:11 2017 +0200

    fixes

commit 394b470a07d73431079f80caa36c7c7042077f40
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 12:24:40 2017 +0200

    fix rpath issue

commit 6787eae384a8592f90598258ccd8207cd499d9fc
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 11:37:05 2017 +0200

    some more fixes with install dir

commit fcf22659c60300e8d39d12e14b21c58a062e739c
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 01:34:06 2017 -0700

    some fixes

commit ede1f0c462978bb70d3b4e2251cb555a592e82e3
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 29 10:16:34 2017 +0200

    fixes

commit b6a1259876a77f54e419a44f1b44d03d5bb49b82
Merge: c79f9a3 6627b0b
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 24 09:35:50 2017 +0200

    Merge remote-tracking branch 'origin/master' into cmake_cleanup

commit c79f9a3421d4d2937c31dab4a601ce09d52b0e54
Merge: 99c3550 030ad1d
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 22 17:52:24 2017 +0200

    Merge remote-tracking branch 'origin/master' into cmake_cleanup

commit 99c35500850e08fdc847013bb384169b1483acb4
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Fri May 19 14:37:28 2017 +0200

    fix rpath

commit 8215e9748d9ee225266bc941da1ca252aebd27de
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Thu May 18 13:29:41 2017 +0200

    remove INSTALL_DIR, rename var to NETGEN_INSTALL_DIR_INCLUDE, install libngpy to python package folder

commit 23d028c4cf7572de9e2e277cda8f6b07b6b1d9f9
Merge: 57027c8 f72a247
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Thu May 18 12:03:59 2017 +0200

    Merge remote-tracking branch 'origin/master' into cmake_cleanup

commit 57027c8c706ff755bdf26887884bbdeca129fe8f
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Fri May 12 17:32:05 2017 +0200

    New CMake option: USE_INTERNAL_TCL (ON by default)

    This option uses the tcl code compiled in onetcl.cpp instead of separate
    tcl files by default. When set at configure time, no tcl files will be
    installed anymore.

commit 27ce5b7edd66d64e2453f5045f5ac08c313f7608
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Fri May 12 17:16:52 2017 +0200

    WIP: Cleanup of CMake files

      - Fix RPATH on Linux (TODO: other platforms)
      - New variables to specify install behaviour:
          NG_INSTALL_DIR_BIN
          NG_INSTALL_DIR_LIB
          NG_INSTALL_DIR_CMAKE
          NG_INSTALL_DIR_INCLUDE
 2017-05-29 21:41:27 +02:00
Christopher Lackner
3ba7d2c276 add meshsizefilename to python meshingparameters 2017-05-17 16:04:56 +02:00
Matthias Hochsteger
9a7307fb39 Start GUI from Python only if Netgen exe is not running 2017-05-15 18:56:47 +02:00
Joachim Schöberl
b4f3107fef default material name 2017-05-13 10:24:12 +02:00
Matthias Hochsteger
c53913b4d1 Remove unused code in CMake files 2017-05-12 13:18:24 +02:00
Joachim Schöberl
7c8631cf2e Merge branch 'move_in_delete_element_array' into 'master' 
use std::move in delete element of array

See merge request !46
 2017-05-11 10:55:55 +02:00
Christopher Lackner
b87e76306f use std::move in delete element of array 2017-05-11 10:25:29 +02:00
Matthias Hochsteger
025f8750be GUI support from Python and some cleanup 
Squashed commit of the following:

commit 5058ceb9351548937487aa94073e7f59236ae9fe
Merge: d37f0af 2da1465
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 19:33:55 2017 +0200

    Merge remote-tracking branch 'origin/master' into native_tcl_macos

commit d37f0afcc1389c0c3ec0899da9c1af158c926ca5
Author: Matthias <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 19:27:12 2017 +0200

    link gui to netgen, some fixes

commit 297141455cd4fab81709c13d6253ad8114beee4a
Author: Matthias <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 19:02:47 2017 +0200

    windows fixes

commit 9bf290a60835f29762b15ee3b722da132678f90c
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 18:59:53 2017 +0200

    More cleanup, proper code separation

     ... between netgen exectuable and gui library

commit f46d438d3c9dd32f9f94642b4ec00b85611ef1dd
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 14:03:53 2017 +0200

    fix typos

commit b3d301ff4e321189aef469bff77f7cffa7b69e98
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 13:32:57 2017 +0200

    also link tk to togl on windows...

commit c3519abee7b041e45c913a45999ed2d29d4ff325
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 13:30:16 2017 +0200

    link TCL to togl on windows

commit 80b607436b45f38f4bac2708a78ef03561ad44e5
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 13:26:45 2017 +0200

    linkt TCL only to netgen executable

commit 080139a431e949e14cb9f05194e19c5129aca3d3
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 13:20:36 2017 +0200

    fix dll ex/import

commit dd68efacb01fbbbe3f136168f12fed41fa3c3c8a
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 13:15:39 2017 +0200

    fix dll export

commit 9023b9ca49b4c2b99f228f64564990e2d0246b8c
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 12:06:14 2017 +0200

    use system tcl/tk on MacOS, but download tcl/tk for windows

commit 16eb4c1b01eb5229f93274791187b2c666bb8b8e
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 12:01:36 2017 +0200

    more cleanup

commit 6df5b82a7d9a1177a755446d563d6c4b98ff6329
Merge: af23786 2b0d3f0
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 11:45:42 2017 +0200

    Merge remote-tracking branch 'origin/master' into native_tcl_macos

commit af2378637a6513de3b50841ed6314cd7e12f7205
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Wed May 10 11:45:40 2017 +0200

    some cleanup

commit 81bbe117efe25df53c71f9ae603c50ee4557703a
Author: Joachim Schöberl <joachim.schoeberl@tuwien.ac.at>
Date:   Tue May 9 20:14:46 2017 +0200

    tk-gui

commit 387e6da678661dd3b9d75d696733f46fe43d789a
Merge: e658b5b e653d8e
Author: Joachim Schöberl <joachim.schoeberl@tuwien.ac.at>
Date:   Tue May 9 18:49:20 2017 +0200

    Merge remote-tracking branch 'origin/gui_from_python' into native_tcl_macos

commit e658b5b2c1ac3264f4165b5f6d2b821b3b1b0926
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Tue May 9 18:30:35 2017 +0200

    use native tcl on macos

commit e653d8e6789d20e24b16a68bf760415940e881f8
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 8 16:37:23 2017 +0200

    next fix

commit f663c80b00754d141a02fa6abde2077c841bbafb
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 8 16:23:21 2017 +0200

    Fix symbol export on windows

commit 70d99782423d33d3fa6f80e758a7377d0cb52840
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Mon May 8 15:14:56 2017 +0200

    GUI support from Python

    Enables experimental support for starting the Netgen GUI from Python
    directly.
    To use it, just import the gui module:
    > import netgen.gui
 2017-05-10 19:34:42 +02:00
Joachim Schöberl
2da1465d52 get surface element from face 2017-05-10 17:41:44 +02:00
Joachim Schöberl
2b0d3f02ba load opengl buffer-functions only if USE_BUFFERS is set 2017-05-08 21:20:36 +02:00
Matthias Hochsteger
990d0fce78 GUI support from Python 
Enables experimental support for starting the Netgen GUI from Python
directly.
To use it, just import the gui module:
> import netgen.gui
 2017-05-08 16:42:49 +02:00
Joachim Schöberl
94fd57154f disable VBO on windows 2017-04-26 12:15:19 +02:00
Matthias Hochsteger
9fb7fcacfc Revert interface code to preserve compatibility with NGSolve 2017-04-20 17:55:56 +02:00
Matthias Hochsteger
247afdb1bd Define NG_INLINE and use it in ngsimd.hpp (works around a bug in gcc5) 2017-04-20 16:22:50 +02:00
Matthias Hochsteger
9247c89fd7 add missing function HSum(a,b) for SIMD<double,1> 2017-04-20 11:41:23 +02:00
Matthias Hochsteger
643c89538d Add support for AVX512 
Restructure mysimd.hpp and add support for AVX512. Changes include

  - Move mysimd.hpp to ngsimd.hpp
  - Expose ngsimd.hpp to NGSolve
  - New namespace ngsimd
  - Second template parameter (width) for SIMD class, default to the
    largest width available
  - Avoid raw avx register types in the interface, use SIMD<> instead
 2017-04-19 18:02:27 +02:00
Joachim Schöberl
70da438d6d on mesh loading, set dummy-geometry if no geometry in mesh-file 2017-04-18 15:06:40 +02:00
Joachim Schöberl
5ed3de978b default constructable/movable tet for bisection-refinement 2017-04-18 08:43:23 +02:00
Joachim Schöberl
ec20b74722 make Element default constructable/movable 2017-04-13 10:40:47 +02:00
Joachim Schöberl
7027df2f73 fix 1->2 simd trafos 2017-04-12 16:44:02 +02:00
Joachim Schöberl
c50bd79beb default constructors assignment operators, cheaper Array-Resize 2017-04-11 21:06:30 +02:00
Joachim Schöberl
5e320a5556 dll-header ? 2017-04-11 10:51:08 +02:00
Joachim Schöberl
e464fe9771 parallel trig-marking for bisection 2017-04-11 10:45:31 +02:00
Joachim Schöberl
0074d8b407 inline GetTimeStamp 2017-04-11 10:45:11 +02:00
Joachim Schöberl
4382fc1168 fix hashtable 2017-04-11 10:04:33 +02:00
Joachim Schöberl
e6b853e995 hashtables roundup to power of 2, optimize bisect 2017-04-11 09:01:36 +02:00
Joachim Schöberl
b68bfdcc73 more parallel 2017-04-06 21:41:26 +02:00
Joachim Schöberl
e9fc64acc6 Merge branch 'multipointevaluation_for_isosurf' into 'master' 
MultiPoint evaluation for DrawIsoSurface

See merge request !42
 2017-04-04 15:28:43 +02:00
Gerhard Kitzler
dda40cf1f4 MultiPoint evaluation for DrawIsoSurface 2017-04-04 11:49:32 +02:00
Joachim Schöberl
65a474b8ef avoid shared-ptr copy 2017-04-04 11:34:24 +02:00
Joachim Schöberl
701d6a2369 inline GetCD2NamePtr 2017-04-03 18:15:34 +02:00
Joachim Schöberl
e1917c8d8a fix warnings 2017-04-03 17:40:01 +02:00
Gerhard Kitzler
8f936f82ea Fix data types for Python exports in python_mesh.cpp 2017-04-03 16:24:56 +02:00
Joachim Schöberl
619f9ff47f GetElement returns Facet-Array. Since for 1D these are point numbers, and point numbers are (still) 1-based, we have to return also the base 2017-04-03 11:17:47 +02:00
Joachim Schöberl
240a132078 avoid size_t-int narrowing in nginterfacev2 - GetElement 2017-04-01 21:00:12 +02:00
Christopher Lackner
794d1b6598 fix el.mat for bbnd elements in 3D 2017-03-30 15:22:19 +02:00
Joachim Schöberl
3d3a2ca186 Revert "Merge branch 'neighbouringdomains' into 'master'" 
This reverts merge request !38
 2017-03-29 15:02:36 +02:00
Christoph Wintersteiger
9a48710988 add implementation of GetBoundaryNeighbouringDomains 2017-03-29 11:22:29 +02:00
Joachim Schöberl
2d835e25cc add prototype GetBoundaryNeightbouringDomains 2017-03-27 15:12:52 +02:00
Matthias Hochsteger
5e2d2f685c Fix warnings (Intel compiler) 
ICC complains about ambigous variable 'i' applying old/new scoping rules.
Therefore, use local loop variables in for loops.
 2017-03-23 15:56:08 +01:00
Lukas Kogler
d24b996c8f Merge branch 'master' into par_fixes 2017-03-22 14:03:11 +01:00
Matthias Hochsteger
079406f615 Include <functional> (gcc7 was complaining here) 2017-03-17 21:09:27 +01:00
Joachim Schöberl
0608eb1ee0 set maxh for subdomains: geo.Add(solid, maxh=0.1) 2017-03-16 20:57:42 +01:00
Joachim Schöberl
5efaa2f85b first add corner points to mesh, and then edge points (for consistent orientation on periodic edges) 2017-03-08 18:07:55 +01:00
Matthias Hochsteger
9c0f1b5bdb adapt parallelmesh.cpp to commit 90d4c940 (topology is a member of Mesh (rather than pointer)...) 2017-03-07 10:43:38 +01:00
lkogler
383ced496b Changed MyMPI_RecvCmd and MyMPI_SendCmd. Disabled USE_BUFFERS for now. 2017-03-06 14:32:20 +01:00
Christopher Lackner
7b1d57b23c remove <vector> from csg header again 2017-02-27 11:35:56 +01:00
Christopher Lackner
58555b96d9 use Array instead of std::vector 2017-02-27 11:32:42 +01:00
Christopher Lackner
87669acfc6 Merge branch 'master' into fix_splinesurface 2017-02-27 11:27:20 +01:00
Joachim Schöberl
90d4c94028 make Topology a member of Mesh (rather then pointer) to reduce number of pointer dereferencing steps. This required move operators for Array and Table. 2017-02-25 19:48:37 +01:00
Joachim Schöberl
c633035043 more size_t 2017-02-25 17:11:30 +01:00
Joachim Schöberl
c143aafaea Array resize checks for trivially copyable 2017-02-24 22:29:57 +01:00
Joachim Schöberl
a698b57596 add unified GetMaterial for co-dimension 2017-02-24 17:18:42 +01:00
Christopher Lackner
89fe31b550 Squashed commit of the following: 
commit fa556baaa222ba349d534027f7203588dcda6ad8
Author: Christopher Lackner <christopher.lackner@tuwien.ac.at>
Date:   Thu Feb 23 15:56:47 2017 +0100

    add python path to docker template

commit 54eb7eedc77ad8c86952c347536e7e1a854b62ed
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Thu Feb 23 14:59:45 2017 +0100

    install pytest in docker images

commit 3c1c755891e8372762130a6ed8c39cf056430264
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Thu Feb 23 14:52:32 2017 +0100

    enable CTest properly, add pytest

commit 4c4cf229ab8e7fd6057f535fb05c3079a9278f80
Author: Christopher Lackner <christopher.lackner@tuwien.ac.at>
Date:   Thu Feb 23 14:02:13 2017 +0100

    fix write splinesurface to savemesh

commit 069fbdbc529c9dd91644663f3f365e08be5af70e
Author: Christopher Lackner <christopher.lackner@tuwien.ac.at>
Date:   Thu Feb 23 09:03:26 2017 +0100

    fix lifetime of SplineSurface
 2017-02-23 16:41:27 +01:00
Matthias Hochsteger
002a2cba6b Fix (or work around?) strange bug on Windows 
The definition of std::max uses references for parameters, which leads
to unnecessary storing of constants on the stack. If the stack is
overwritten this leads to wrong results.
max2() works around this using call-by-value.
 2017-02-16 09:12:45 +01:00
Joachim Schöberl
cd314e2f45 few more inline functions 2017-02-15 22:31:24 +01:00
Matthias
360e6fba86 Fix for OCC7.1 on Windows, also support providing own OCC version by setting OCC_INCLUDE_DIR and OCC_LIBRARY_DIR 2017-02-09 12:07:09 +01:00
Joachim Schöberl
e190943f4f change bc-names 2017-02-09 10:06:34 +01:00
Matthias
f674d5a20a Assume that malloc returns memory that is 16 byte-aligned 
This fixes an issue with inconsistent memory allocation/deallocation of
MeshPoint in Python.
 2017-02-07 10:26:31 +01:00
Joachim Schöberl
fd3d3e28e6 fix warning 2017-02-04 07:48:48 +01:00
Matthias Hochsteger
fa9d918963 Apply patches for OpenCasCade 7 by Lorenz Lechner 
see b443cbdb13/patches
 2017-01-31 19:21:25 +01:00
Matthias Hochsteger
0cf1cfea5c Set DLL_HEADER to export in OCC subfolder 2017-01-31 14:58:01 +01:00
Christoph Wintersteiger
551db1627e fix CalcProj for ExtrusionFace and export to python 2017-01-27 16:14:27 +01:00
Christoph Wintersteiger
660425ab61 fix for DEVELOP, Vec has no Get 2017-01-27 16:07:08 +01:00
Joachim Schöberl
52517218c9 Merge branch 'elofpoint-tol' into 'master' 
Use tolerance in GetElementOfPoint when using a search tree

I'm getting artifacts at domain edges (see attached), because no tolerance is used when calling `elementsearchtree->GetIntersecting()` inside `GetElementOfPoint`.

![searchtree](/uploads/5aa10da74cac7bef9e134756ea897e49/searchtree.png)

See merge request !29
 2017-01-25 21:25:52 +01:00
Matthias Hochsteger
4cff6b546a install all headers to INCDIR 2017-01-16 14:59:57 +01:00
Alexander Schlüter
60768cf9c5 use tolerance in GetElementOfPoint when using a search tree 2017-01-12 21:09:07 +01:00
Matthias Hochsteger
190d035809 Fix Python paths 2017-01-09 18:45:12 +01:00
Joachim Schöberl
f44a32e4de Merge branch 'pointoutofquad' into 'master' 
point out of quad fix

Now the error "point out of domain" does not appear any more, but the values are wrong. [pointoutofquad.py](/uploads/91e142ab369491ac5a4e4a8d9c93d671/pointoutofquad.py)

See merge request !28
 2017-01-06 22:16:53 +01:00
Joachim Schöberl
d1de4a7cf9 Introduce NetgenGeometry base class to Python. export meshing first, then csg 2017-01-05 05:08:24 +01:00
Michael Neunteufel
3e9ad94307 point out of quad fix 2017-01-02 11:06:36 +01:00
Joachim Schöberl
c31240580b remove test output 2017-01-01 15:34:55 +01:00
Joachim Schöberl
9790774b49 change to SurfaceElementIndex 2016-12-15 13:05:34 +01:00
Joachim Schöberl
d3e1f0e8fd Merge branch 'py_exp_ComprAndDelsurfels' into 'master' 
Compress and DeleteSurfaceElements to python

export Compress and DeleteSurfaceElement to python. 

Perhaps you prefer having the ElementId-Version of DeleteSurfaceElement instead?

See merge request !26
 2016-12-15 13:03:24 +01:00
Joachim Schöberl
bf1dfb6b08 Merge branch 'stl_to_python' into 'master' 
Stl to python



See merge request !25
 2016-12-14 18:02:52 +01:00
Christoph Lehrenfeld
5a940b0b13 Compress and DeleteSurfaceElements 2016-12-14 13:28:13 +01:00
Joachim Schöberl
775d998235 don't be so strict with deprecated 2016-12-12 23:08:22 +01:00
Joachim Schöberl
54aa508fb6 fix 0/1 base 2016-12-12 23:01:21 +01:00
Christopher Lackner
e16dfde5e7 fix libstlvis 2016-12-12 14:26:49 +01:00
Christopher Lackner
d081c1d455 Merge branch 'master' into stl_to_python 2016-12-12 14:24:09 +01:00
Christopher Lackner
2649726692 fix DLL_HEADER export 2016-12-12 14:22:24 +01:00
Christopher Lackner
a5e411d008 load stl fix and some vis 2016-12-12 13:14:47 +01:00
Joachim Schöberl
d6b16870fa PointIndex::BASE = 0 and STL, PointIndices 2016-12-12 11:47:46 +01:00
Christopher Lackner
25d2e497b1 add python stl submodule 2016-12-12 10:47:05 +01:00
Christopher Lackner
6e60338987 Merge branch 'master' into stl_to_python 2016-12-12 10:39:51 +01:00
Joachim Schöberl
be1e6e160b PointIndex::BASE = 0 working for CSG 2016-12-11 20:17:07 +01:00
Joachim Schöberl
59dc0b6c6a Array::Append does not return size anymore ( will be changed to last ) 2016-12-11 18:22:07 +01:00
Joachim Schöberl
bdbc415589 more use of PointIndex 2016-12-11 18:02:16 +01:00
Joachim Schöberl
4c32c2ac25 more use of PointIndex 2016-12-11 12:12:05 +01:00
Joachim Schöberl
e4a6d127fd dont't store orientation of edges and faces. This gives a unified memory layout for edges and faces and allows to access facets without copying (in 2D and 3D) 2016-12-10 19:02:13 +01:00
Christopher Lackner
8870108846 Merge branch 'master' into mesh_only_one_domain 2016-12-09 16:36:50 +01:00
Christopher Lackner
561cf4e75f add files 2016-12-09 16:34:22 +01:00
Joachim Schöberl
a423258f54 Merge branch 'genmesh_firststep_as_meshingparam' into 'master' 
Genmesh laststep as meshingparam



See merge request !23
 2016-12-07 20:01:54 +01:00
Joachim Schöberl
bb85bb01a3 quads are curved (in general) 2016-12-06 21:54:51 +01:00
Christopher Lackner
9f9a5e4304 fix typo 2016-12-06 13:38:18 +01:00
Christopher Lackner
c771ca5bdc fix occ genmesh 2016-12-06 13:23:08 +01:00
Christopher Lackner
7743503c1d fix and use in swapimprove as well 2016-12-06 11:32:16 +01:00
Christopher Lackner
1f314ae0ee fix wrong order of arguments 2016-12-05 15:37:05 +01:00
Christopher Lackner
181eea5038 typo fix 2016-12-05 15:10:34 +01:00
Christopher Lackner
dc3a214994 merge endMeshStep 2016-12-05 15:08:25 +01:00
Christopher Lackner
16ecf99cce remove onlySurface again (use MeshingSteps instead) 2016-12-05 14:59:44 +01:00
Christopher Lackner
bd39b8df88 export enum MeshingStep 2016-12-05 14:39:09 +01:00
Christopher Lackner
f582c7935f remove perfstepsstart from python interface 2016-12-05 14:31:12 +01:00
Christopher Lackner
7e4892a9e7 firststep and laststep as meshingparameters to be exported to python 2016-12-05 13:50:21 +01:00
Christopher Lackner
a0326d490d some fixes 2016-12-05 13:15:06 +01:00
Christopher Lackner
ee833ff362 add onlySurface to generate only surface mesh 2016-12-02 19:00:34 +01:00
Christopher Lackner
0d36c69c25 domainwise meshing and optimization enabled 2016-12-02 14:59:59 +01:00
Matthias
953bd13cf4 Support for OpenGL buffer objects on Windows 2016-12-02 12:27:26 +01:00
Matthias Hochsteger
e31cc7dfa1 Not necessary to cast py::list to python object 2016-12-01 14:24:30 +01:00
Michael Neunteufel
f65651ce0e bug fix PointContainedIn2DElement 2016-11-27 19:25:25 +01:00
Matthias Hochsteger
c9c2f26334 remove unnecessary version definition 2016-11-24 15:56:50 +01:00
Joachim Schöberl
5b3eb4077a fix create vol-element (thx Astrid) 2016-11-23 20:44:52 +01:00