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326 Commits

Author SHA1 Message Date
Matthias Hochsteger
9c0dbec8c9 Fix SIMD<mask64> ctor and Unpack 2020-12-15 15:31:17 +01:00
Matthias Hochsteger
dbe894fea3 Support for Apple M1 2020-12-15 10:43:11 +01:00
Matthias Hochsteger
1b55c51da5 remove AlignedAlloc, use alignas 2020-12-15 09:40:43 +01:00
Matthias Hochsteger
1f3aebcec0 Fix AVX-Operators for int64_t simd (use generic ones) 2020-12-15 09:40:43 +01:00
mhochsteger
f213a7a5b1 fix fabs for AVX on Windows 2020-12-14 15:50:27 +01:00
Matthias Hochsteger
248145bbf0 fix wrong simd operators 2020-12-14 12:47:53 +01:00
Matthias Hochsteger
fc44eb95df simd - array and variadic ctor 2020-12-11 23:12:34 +01:00
Matthias Hochsteger
2d667a08dc move (refactored) SIMD headers from ngsolve into ngcore 2020-12-11 20:54:41 +01:00
Christopher Lackner
cb0d8295bf fix hashing of bitarray (uninitialized value in HashArchive & random 
values at end)
 2020-11-25 22:07:07 +01:00
Matthias Hochsteger
91f127ef71 memory tracer - fix memory accumulation of children 2020-11-25 14:34:29 +01:00
Matthias Hochsteger
b55264e0ee memory tracing - handle multiple consecutive tracers correctly 2020-11-24 19:20:21 +01:00
Matthias Hochsteger
efdc57885a memory tracing - store parents array instead of children table 2020-11-24 17:12:39 +01:00
Christopher Lackner
922ad16213 if more memory is deallocated than allocated set memtracer to 0 not 
negative values
 2020-11-21 22:32:41 +01:00
Christopher Lackner
a69cdc9000 mem tracing compile time option, simplify by MemoryTracer as member 2020-11-21 15:49:07 +01:00
Matthias Hochsteger
87623981a6 export PajeTrace.WriteMemoryChart() to python 2020-11-19 19:29:04 +01:00
Matthias Hochsteger
f0152baacf mem tracing - TraceMemorySwap helper function 2020-11-19 17:35:29 +01:00
Matthias Hochsteger
6f98123e98 mem tracing - use topological sorting, some fixes 2020-11-19 16:16:39 +01:00
Matthias Hochsteger
a17066a387 html chart for peak memory consumption, some Array tracing fixes 2020-11-19 14:57:45 +01:00
Matthias Hochsteger
f143995f27 clean up memory tracing 2020-11-18 21:45:00 +01:00
Matthias Hochsteger
1a93fb3fa5 first attempt on memory tracing 2020-11-18 20:20:35 +01:00
Joachim Schöberl
cddfb4a0b5 fixing delaunay2d point search, non-parallel for small meshes 2020-10-26 11:20:12 +01:00
Joachim Schöberl
bfbef51996 remove bitarray in delaunay2d, just one hashtable position 2020-10-23 19:40:47 +02:00
Matthias Hochsteger
832485e41a pybind11 compatibility 2020-10-22 12:11:19 +02:00
Matthias Hochsteger
b3d757ccd1 update pybind11 to 2.6.0rc3 2020-10-17 17:58:38 +02:00
Matthias Hochsteger
6544fbeca6 sunburst chart - tooltip formatting 2020-10-14 11:52:34 +02:00
Matthias Hochsteger
14e6a1d24b more statistics in sunburst chart 2020-10-14 11:52:26 +02:00
Matthias Hochsteger
25efdadd05 helper macro for Timer/RegionTimer definition 2020-10-13 11:11:33 +02:00
Joachim Schöberl
b5a9580a8e BitArray::Data 2020-10-08 21:27:16 +02:00
Matthias Hochsteger
2629208f38 pajetrace - fix Timer names in MPI-trace 2020-10-08 12:20:46 +02:00
Matthias Hochsteger
7a1344bfcb cmake variable NG_COMPILE_FLAGS to set additional compile options 2020-10-01 13:35:53 +02:00
Christopher Lackner
1666155d25 add range adaptors (filter, transform) 2020-09-19 17:39:03 +02:00
Joachim Schöberl
283db5c637 trange bracket with size_t for T_Range 2020-09-19 09:43:00 +02:00
Joachim Schöberl
8b5675a8e2 check if mpi is initialized 2020-09-15 23:16:04 +02:00
Christopher Lackner
c7af26771e fix bug in BitArray== 2020-09-11 16:54:25 +02:00
Joachim Schöberl
65761e7768 check copy_assignable also in copy-constructor 2020-09-09 07:03:12 +02:00
Joachim Schöberl
98697959dd check for copy_assignable 2020-09-09 06:31:03 +02:00
Joachim Schöberl
b2b8a15611 Array copy only if type is assignable 2020-09-08 23:00:03 +02:00
Joachim Schöberl
a45cbd6f84 parallel pickling per default on 2020-09-04 14:47:56 +02:00
Christopher Lackner
a8062a6f36 fix missing initial value for offset in HashArchive 2020-09-01 11:59:37 +02:00
Christopher Lackner
deab89adf8 add missing NGCORE_API and HashArchive & with const value 2020-08-29 16:19:45 +02:00
Christopher Lackner
55971b3dde HashArchive 2020-08-29 15:38:03 +02:00
Christopher Lackner
f45fbfd811 operator== and better archive for BitArray 2020-08-29 15:37:48 +02:00
Joachim Schöberl
020dd4373d DynamicTable: char-alloc if not trivially constructable 2020-08-29 12:36:45 +02:00
Joachim Schöberl
8840c519d3 Min/Max of FlatArray, DynamicTable::ChangeSize 2020-08-29 11:04:47 +02:00
Joachim Schöberl
73846f23ae remove BaseDynamicTable, everything in template class 2020-08-29 09:58:33 +02:00
Joachim Schöberl
f8dd4be8d6 modernize ParallelTopology 2020-08-29 09:36:46 +02:00
Joachim Schöberl
9968037361 move semantics to table, PNums to LineSegments 2020-08-28 08:47:33 +02:00
Joachim Schöberl
5863136285 MaybeTrue/False for xbool 2020-08-23 18:47:49 +02:00
Matthias Hochsteger
334faad054 pybind11 - automatic conversion of python list to Array<> 2020-08-20 18:25:06 +02:00
Joachim Schöberl
5e09626466 parallel pickling with mesh-merging 2020-08-19 14:50:11 +02:00
Joachim Schöberl
9e105c48ea mpi-wrapper 2020-08-17 20:28:00 +02:00
Joachim Schöberl
33626c6669 clear solutiondata object on python-exit 2020-08-17 15:55:32 +02:00
Matthias Hochsteger
72447a51d5 Fix paje trace with MPI and TaskManager 2020-08-10 12:20:17 +02:00
Matthias Hochsteger
87c2901e32 Disable paje trace thread counter by default (halves trace file size) 2020-08-07 15:44:21 +02:00
Matthias Hochsteger
b272614a51 export PajeTrace to Python (with context manager api) 2020-08-07 15:43:52 +02:00
Matthias Hochsteger
f9ff1db7c3 let MPI rank 1 write paje trace file (more timers than rank0) 2020-08-07 15:34:21 +02:00
Matthias Hochsteger
acfe9bb606 Merge traces with MPI 2020-08-07 12:59:22 +02:00
Joachim Schöberl
2e39d07cc8 mpi constants for non-mpi 2020-08-05 18:05:31 +02:00
Joachim Schöberl
3c8f1877c9 more mpi calls from ngcore 2020-08-05 01:11:26 +02:00
Joachim Schöberl
254257d406 timer in MPI wrappes 2020-08-04 16:30:08 +02:00
Matthias Hochsteger
4682e6915c remove FlatArray for C-Array, use ArrayMem 2020-08-04 12:59:03 +02:00
Joachim Schöberl
698192ed72 FlatArray for C-array 2020-08-03 14:45:32 +02:00
Joachim Schöberl
94bed40761 modernize parallelmesh (Array, mpi_wrapper) 2020-08-03 00:44:28 +02:00
Joachim Schöberl
c0909d69c2 no valid MPI-comm in sequential mode 2020-08-02 11:33:11 +02:00
Joachim Schöberl
ba84439227 NgMPI_Communicator by reference, check for valid mpi-comm 2020-08-02 09:25:44 +02:00
Joachim Schöberl
c074e0c752 reduce duplicated mpi-wrapping 2020-07-31 09:57:19 +02:00
Matthias Hochsteger
f73159e35a Set version of Netgen globally (for archives), interface to get version 2020-07-23 20:12:47 +02:00
Matthias Hochsteger
dcc0484be0 install netgen_version.hpp, set version in Archive 2020-07-23 16:25:06 +02:00
Joachim Schöberl
ba5e741ad3 adding pybind11/stl to ngcore (needed for BitArray ctor) 2020-07-22 10:15:48 +02:00
Matthias Hochsteger
e17aa88cad set signal handlers only if NG_BACKTRACE is set 2020-07-15 16:21:51 +02:00
Joachim Schöberl
3b5c346e63 proper terms 2020-06-17 19:11:17 +02:00
Joachim Schöberl
897cf6f848 output of xbool 2020-05-22 08:16:05 +02:00
Matthias Hochsteger
267e8b33fb cmake - use git to generate version string 2020-05-18 15:55:40 +02:00
Christopher Lackner
9ffb22c37f fix archive of bitarray 2020-05-07 10:52:09 +02:00
Christopher Lackner
45a4b2c913 pickle bitarrays 2020-05-07 10:03:00 +02:00
Christopher Lackner
9af476c353 template shouldn't have NGCORE_API 2020-04-20 10:26:17 +02:00
Christopher Lackner
27baa178d2 fix new clang warning and add helper function 2020-04-20 10:13:04 +02:00
Christopher Lackner
b46ec8dc7b fix printing of 1 based arrays 2020-04-18 13:40:19 +02:00
Christopher Lackner
d74061dd23 python str method for arrays 2020-04-06 12:43:42 +02:00
Matthias Hochsteger
a52ccd7ce5 Fix build with USE_NUMA=ON 2020-03-25 10:40:12 +01:00
Joachim Schöberl
48e4865fee copy BitArray 2020-03-11 21:34:27 +01:00
Matthias Hochsteger
ce90bd9e83 [cmake] Simplify compile flag handling on Windows 
Add options/define flags to ngcore, so they are automatically passed on
to dependencies
 2020-01-16 16:38:06 -08:00
Matthias Hochsteger
72226e8673 Fix non-Python builds 2019-12-13 11:20:52 +01:00
Joachim Schöberl
a103896079 printing flags 2019-12-09 16:20:42 +01:00
Matthias Hochsteger
7f4b96fe11 Fix ctor with LocalHeap in ClosedHashTable 
Set mask, round up size to next power of 2
 2019-12-02 17:05:50 +01:00
Joachim Schöberl
4658e34f05 Revert "api" 
This reverts commit 3207ab1d99
 2019-11-29 15:26:20 +00:00
Joachim Schöberl
3207ab1d99 api 2019-11-29 15:02:37 +01:00
Matthias Hochsteger
9495d1feae Ignore warning C4910 on Windows 
warning C4910: '__declspec(dllexport)' and 'extern' are incompatible on an explicit instantiation
 2019-11-28 15:49:57 +01:00
Matthias Hochsteger
f3d9d3ad67 [cmake] Don't link python libraries in unix-conda environment 
Conda links python libs statically to python executable
 2019-11-26 19:26:18 +00:00
Christopher Lackner
de1932227b exception constructor outside of ifdef GNUC 2019-11-25 16:45:12 +01:00
Joachim Schöberl
648794b0bb Exception ctor in cpp to reduce codesize 2019-11-25 07:46:35 +01:00
Christopher Lackner
e84e4f155c fix parsing numlist flag if objects are integers 2019-11-21 17:46:39 +01:00
Matthias Hochsteger
8940bf7c2c Only collect backtrace if NG_BACKTRACE is set 2019-11-20 14:30:23 +01:00
Matthias Hochsteger
90fc783e55 Fix visibility warning 2019-11-13 16:07:36 +01:00
Matthias Hochsteger
262c656bcb Fix overflow in backtrace 2019-10-31 18:40:46 +01:00
Matthias Hochsteger
94d0a5a585 [cmake] Set interface include dir for ngcore 2019-10-30 13:56:49 +01:00
Matthias Hochsteger
2a68748117 Add missing delete operators on MacOS 2019-10-28 13:57:21 +01:00
Joachim Schöberl
d0864b9901 Apple-clang seems to support now the standard thread_local variables 2019-10-28 12:18:23 +01:00
Bernd Schwarzenbacher
6d34f01d95 Add a HashValue<INT<3>> for ParallelHashTable 2019-10-21 00:12:29 +02:00
Matthias Hochsteger
c2e658274a Avoid recursive call of signal handler 2019-10-14 18:01:11 +02:00