#ifdef PARALLEL #include #include "paralleltop.hpp" namespace netgen { ParallelMeshTopology :: ParallelMeshTopology (const Mesh & amesh) : mesh(amesh) { is_updated = false; } ParallelMeshTopology :: ~ParallelMeshTopology () { ; } void ParallelMeshTopology :: Reset () { *testout << "ParallelMeshTopology::Reset" << endl; if ( ntasks == 1 ) return; int ned = mesh.GetTopology().GetNEdges(); int nfa = mesh.GetTopology().GetNFaces(); if (glob_edge.Size() != ned) { glob_edge.SetSize(ned); glob_face.SetSize(nfa); glob_edge = -1; glob_face = -1; loc2distedge.ChangeSize (ned); loc2distface.ChangeSize (nfa); } if (glob_vert.Size() != mesh.GetNV()) { SetNV(mesh.GetNV()); SetNE(mesh.GetNE()); } } void ParallelMeshTopology :: Print() const { ; } void ParallelMeshTopology :: SetDistantFaceNum (int dest, int locnum) { for ( int i = 0; i < loc2distface[locnum-1].Size(); i+=1 ) if ( loc2distface[locnum-1][i] == dest ) return; loc2distface.Add(locnum-1, dest); } void ParallelMeshTopology :: SetDistantPNum (int dest, int locnum) { for ( int i = 0; i < loc2distvert[locnum-1].Size(); i+=1 ) if ( loc2distvert[locnum-1][i] == dest ) return; loc2distvert.Add (locnum-1, dest); } void ParallelMeshTopology :: SetDistantEdgeNum (int dest, int locnum) { for ( int i = 0; i < loc2distedge[locnum-1].Size(); i+=1 ) if ( loc2distedge[locnum-1][i] == dest ) return; loc2distedge.Add (locnum-1, dest); } void ParallelMeshTopology :: SetNV (int anv) { glob_vert.SetSize(anv); glob_vert = -1; loc2distvert.ChangeSize (anv); } void ParallelMeshTopology :: SetNE ( int ane ) { glob_el.SetSize (ane); glob_el = -1; } void ParallelMeshTopology :: SetNSE ( int anse ) { glob_surfel.SetSize(anse); glob_surfel = -1; } void ParallelMeshTopology :: SetNSegm ( int anseg ) { glob_segm.SetSize (anseg); glob_segm = -1; } void ParallelMeshTopology :: UpdateCoarseGridGlobal () { if (id == 0) PrintMessage ( 3, "UPDATE GLOBAL COARSEGRID STARTS" ); int timer = NgProfiler::CreateTimer ("UpdateCoarseGridGlobal"); NgProfiler::RegionTimer reg(timer); *testout << "ParallelMeshTopology :: UpdateCoarseGridGlobal" << endl; const MeshTopology & topology = mesh.GetTopology(); if ( id == 0 ) { Array*> sendarrays(ntasks); for (int dest = 1; dest < ntasks; dest++) sendarrays[dest] = new Array; Array edges, faces; for (int el = 1; el <= mesh.GetNE(); el++) { topology.GetElementFaces (el, faces); topology.GetElementEdges (el, edges); const Element & volel = mesh.VolumeElement (el); Array & sendarray = *sendarrays[volel.GetPartition()]; for ( int i = 0; i < edges.Size(); i++ ) sendarray.Append (edges[i]); for ( int i = 0; i < faces.Size(); i++ ) sendarray.Append (faces[i]); } for (int el = 1; el <= mesh.GetNSE(); el++) { topology.GetSurfaceElementEdges (el, edges); const Element2d & surfel = mesh.SurfaceElement (el); Array & sendarray = *sendarrays[surfel.GetPartition()]; for ( int i = 0; i < edges.Size(); i++ ) sendarray.Append (edges[i]); sendarray.Append (topology.GetSurfaceElementFace (el)); } Array sendrequests; for (int dest = 1; dest < ntasks; dest++) sendrequests.Append (MyMPI_ISend (*sendarrays[dest], dest, MPI_TAG_MESH+10)); MPI_Waitall (sendrequests.Size(), &sendrequests[0], MPI_STATUS_IGNORE); for (int dest = 1; dest < ntasks; dest++) delete sendarrays[dest]; } else { Array recvarray; MyMPI_Recv (recvarray, 0, MPI_TAG_MESH+10); int ii = 0; Array faces, edges; for (int volel = 1; volel <= mesh.GetNE(); volel++) { topology.GetElementEdges ( volel, edges); for ( int i = 0; i < edges.Size(); i++) SetLoc2Glob_Edge ( edges[i], recvarray[ii++]); topology.GetElementFaces( volel, faces); for ( int i = 0; i < faces.Size(); i++) SetLoc2Glob_Face ( faces[i], recvarray[ii++]); } for (int surfel = 1; surfel <= mesh.GetNSE(); surfel++) { topology.GetSurfaceElementEdges (surfel, edges); for (int i = 0; i < edges.Size(); i++) SetLoc2Glob_Edge (edges[i], recvarray[ii++]); int face = topology.GetSurfaceElementFace (surfel); SetLoc2Glob_Face ( face, recvarray[ii++]); } } is_updated = true; } void ParallelMeshTopology :: UpdateCoarseGrid () { if (is_updated) return; Reset(); static int timer = NgProfiler::CreateTimer ("UpdateCoarseGrid"); NgProfiler::RegionTimer reg(timer); (*testout) << "UPDATE COARSE GRID PARALLEL TOPOLOGY " << endl; if (id == 0) PrintMessage (1, "update parallel topology"); // UpdateCoarseGridGlobal(); // MPI_Barrier (MPI_COMM_WORLD); MPI_Group MPI_GROUP_WORLD; MPI_Group MPI_LocalGroup; MPI_Comm MPI_LocalComm; int process_ranks[] = { 0 }; MPI_Comm_group (MPI_COMM_WORLD, &MPI_GROUP_WORLD); MPI_Group_excl (MPI_GROUP_WORLD, 1, process_ranks, &MPI_LocalGroup); MPI_Comm_create (MPI_COMM_WORLD, MPI_LocalGroup, &MPI_LocalComm); if (id == 0) return; Array sendarray, recvarray; static int timerv = NgProfiler::CreateTimer ("UpdateCoarseGrid - ex vertices"); static int timere = NgProfiler::CreateTimer ("UpdateCoarseGrid - ex edges"); static int timerf = NgProfiler::CreateTimer ("UpdateCoarseGrid - ex faces"); Array cnt_send(ntasks-1); NgProfiler::StartTimer (timere); const MeshTopology & topology = mesh.GetTopology(); int nfa = topology . GetNFaces(); int ned = topology . GetNEdges(); // exchange edges cnt_send = 0; int v1, v2; for (int edge = 1; edge <= ned; edge++) { topology.GetEdgeVertices (edge, v1, v2); for (int dest = 1; dest < ntasks; dest++) if (IsExchangeVert (dest, v1) && IsExchangeVert (dest, v2)) cnt_send[dest-1]+=2; } TABLE send_edges(cnt_send); INDEX_2_HASHTABLE gv2e(2*ned); for (int edge = 1; edge <= ned; edge++) { topology.GetEdgeVertices (edge, v1, v2); INDEX_2 es(GetGlobalPNum(v1), GetGlobalPNum(v2)); es.Sort(); gv2e.Set (es, edge); for (int dest = 1; dest < ntasks; dest++) if (IsExchangeVert (dest, v1) && IsExchangeVert (dest, v2)) { send_edges.Add (dest-1, es[0]); send_edges.Add (dest-1, es[1]); } } TABLE recv_edges(ntasks-1); MyMPI_ExchangeTable (send_edges, recv_edges, MPI_TAG_MESH+9, MPI_LocalComm); for (int sender = 1; sender < ntasks; sender ++) if (id != sender) { FlatArray recvarray = recv_edges[sender-1]; for (int ii = 0; ii < recvarray.Size(); ii+=2) { INDEX_2 gv12 (recvarray[ii],recvarray[ii+1]); if (gv2e.Used (gv12)) SetDistantEdgeNum (sender, gv2e.Get(gv12)); } } NgProfiler::StopTimer (timere); // MPI_Barrier (MPI_LocalComm); if (mesh.GetDimension() == 3) { NgProfiler::StartTimer (timerf); // exchange faces cnt_send = 0; Array verts; for (int face = 1; face <= nfa; face++) { topology.GetFaceVertices (face, verts); for (int dest = 1; dest < ntasks; dest++) if (IsExchangeVert (dest, verts[0]) && IsExchangeVert (dest, verts[1]) && IsExchangeVert (dest, verts[2])) cnt_send[dest-1]+=3; } TABLE send_faces(cnt_send); INDEX_3_HASHTABLE gv2f(2*nfa); for (int face = 1; face <= nfa; face++) { topology.GetFaceVertices (face, verts); INDEX_3 fs (GetGlobalPNum(verts[0]), GetGlobalPNum(verts[1]), GetGlobalPNum(verts[2])); fs.Sort(); gv2f.Set (fs, face); for (int dest = 1; dest < ntasks; dest++) if (IsExchangeVert (dest, verts[0]) && IsExchangeVert (dest, verts[1]) && IsExchangeVert (dest, verts[2])) { send_faces.Add (dest-1, fs[0]); send_faces.Add (dest-1, fs[1]); send_faces.Add (dest-1, fs[2]); } } TABLE recv_faces(ntasks-1); MyMPI_ExchangeTable (send_faces, recv_faces, MPI_TAG_MESH+9, MPI_LocalComm); for (int sender = 1; sender < ntasks; sender ++) if (id != sender) { FlatArray recvarray = recv_faces[sender-1]; for (int ii = 0; ii < recvarray.Size(); ii+=3) { INDEX_3 gv123 (recvarray[ii],recvarray[ii+1],recvarray[ii+2]); if (gv2f.Used (gv123)) SetDistantFaceNum (sender, gv2f.Get(gv123)); } } /* Array glob2loc; int maxface = 0; for (int face = 1; face <= nfa; face++) maxface = max (maxface, GetGlobalFaceNum (face)); // glob2loc.SetSize (nfaglob); glob2loc.SetSize (maxface); glob2loc = -1; for (int loc = 1; loc <= nfa; loc++) glob2loc[GetGlobalFaceNum(loc)] = loc; cnt_send = 0; Array verts; for (int face = 1; face <= nfa; face++) { topology.GetFaceVertices (face, verts); for (int dest = 1; dest < ntasks; dest++) if (IsExchangeVert (dest, verts[0]) && IsExchangeVert (dest, verts[1]) && IsExchangeVert (dest, verts[2])) { cnt_send[dest-1]+=2; } } TABLE send_faces(cnt_send); for (int face = 1; face <= nfa; face++) { topology.GetFaceVertices (face, verts); for (int dest = 1; dest < ntasks; dest++) { if (IsExchangeVert (dest, verts[0]) && IsExchangeVert (dest, verts[1]) && IsExchangeVert (dest, verts[2])) { send_faces.Add (dest-1, GetGlobalFaceNum(face)); send_faces.Add (dest-1, face); } } } TABLE recv_faces(ntasks-1); MyMPI_ExchangeTable (send_faces, recv_faces, MPI_TAG_MESH+8, MPI_LocalComm); for (int sender = 1; sender < ntasks; sender ++) if (id != sender) { FlatArray recvarray = recv_faces[sender-1]; for (int ii = 0; ii < recvarray.Size(); ) { int globf = recvarray[ii++]; int distf = recvarray[ii++]; if (globf <= maxface) { int locf = glob2loc[globf]; if (locf != -1) SetDistantFaceNum (sender, locf); } } } */ NgProfiler::StopTimer (timerf); } is_updated = true; } } #endif