#include #include "meshing.hpp" namespace netgen { using ngcore::ParallelForRange; using ngcore::INT; template void QuickSortRec (NgFlatArray data, int left, int right) { int i = left; int j = right; T midval = data[(left+right)/2]; do { while (data[i] < midval) i++; while (midval < data[j]) j--; if (i <= j) { Swap (data[i], data[j]); i++; j--; } } while (i <= j); if (left < j) QuickSortRec (data, left, j); if (i < right) QuickSortRec (data, i, right); } template void QuickSort (NgFlatArray data) { if (data.Size() > 1) QuickSortRec (data, 0, data.Size()-1); } MeshTopology :: MeshTopology (const Mesh & amesh) : mesh(&amesh) { buildedges = true; buildfaces = true; timestamp = -1; } MeshTopology :: ~MeshTopology () { ; } bool MeshTopology :: NeedsUpdate() const { return (timestamp <= mesh->GetTimeStamp()); } void MeshTopology :: EnableTable (string name, bool set) { if (name == "edges") SetBuildEdges(set); else if (name == "faces") SetBuildFaces(set); else if (name == "parentedges") SetBuildParentEdges(set); else if (name == "parentfaces") SetBuildParentFaces(set); else throw Exception ("noting known about table "+name +"\n" "knwon are 'edges', 'faces', 'parentedges', 'parentfaces'"); } template void LoopOverEdges (const Mesh & mesh, MeshTopology & top, PointIndex v, FUNC func) { for (ElementIndex elnr : top.GetVertexElements(v)) { const Element & el = mesh[elnr]; int neledges = MeshTopology::GetNEdges (el.GetType()); const ELEMENT_EDGE * eledges = MeshTopology::GetEdges0 (el.GetType()); for (int k = 0; k < neledges; k++) { INDEX_2 edge(el[eledges[k][0]], el[eledges[k][1]]); // edge.Sort(); int edgedir = (edge.I1() > edge.I2()); if (edgedir) swap (edge.I1(), edge.I2()); if (edge.I1() != v) continue; func (edge, elnr, k, 3, edgedir); } } for (SurfaceElementIndex elnr : top.GetVertexSurfaceElements(v)) { const Element2d & el = mesh[elnr]; int neledges = MeshTopology::GetNEdges (el.GetType()); const ELEMENT_EDGE * eledges = MeshTopology::GetEdges0 (el.GetType()); for (int k = 0; k < neledges; k++) { INDEX_2 edge(el[eledges[k][0]], el[eledges[k][1]]); // edge.Sort(); int edgedir = (edge.I1() > edge.I2()); if (edgedir) swap (edge.I1(), edge.I2()); if (edge.I1() != v) continue; func (edge, elnr, k, 2, edgedir); } } for (SegmentIndex elnr : top.GetVertexSegments(v)) { const Segment & el = mesh[elnr]; INDEX_2 edge(el[0], el[1]); int edgedir = (edge.I1() > edge.I2()); if (edgedir) swap (edge.I1(), edge.I2()); edge.Sort(); if (edge.I1() != v) continue; func (edge, elnr, 0, 1, edgedir); } } template void LoopOverFaces (const Mesh & mesh, MeshTopology & top, PointIndex v, FUNC func) { for (ElementIndex elnr : top.GetVertexElements(v)) { const Element & el = mesh[elnr]; int nelfaces = MeshTopology::GetNFaces (el.GetType()); const ELEMENT_FACE * elfaces = MeshTopology::GetFaces0 (el.GetType()); for (int j = 0; j < nelfaces; j++) if (elfaces[j][3] < 0) { // triangle INDEX_4 face(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]], 0); int facedir = 0; if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 1; } if (face.I2() > face.I3()) { swap (face.I2(), face.I3()); facedir += 2; } if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 4; } if (face.I1() != v) continue; func (face, elnr, j, true, facedir); } /* if (pass == 1) { if (!vert2face.Used (face)) { nfa++; vert2face.Set (face, nfa); INDEX_4 hface(face.I1(),face.I2(),face.I3(),0); face2vert.Append (hface); } } else { int facenum = vert2face.Get(face); faces[elnr][j].fnr = facenum-1; faces[elnr][j].forient = facedir; } */ else { // quad // int facenum; INDEX_4 face4(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]], el[elfaces[j][3]]); int facedir = 0; if (min2 (face4.I1(), face4.I2()) > min2 (face4.I4(), face4.I3())) { // z - flip facedir += 1; swap (face4.I1(), face4.I4()); swap (face4.I2(), face4.I3()); } if (min2 (face4.I1(), face4.I4()) > min2 (face4.I2(), face4.I3())) { // x - flip facedir += 2; swap (face4.I1(), face4.I2()); swap (face4.I3(), face4.I4()); } if (face4.I2() > face4.I4()) { // diagonal flip facedir += 4; swap (face4.I2(), face4.I4()); } if (face4.I1() != v) continue; func(face4, elnr, j, true, facedir); /* INDEX_3 face(face4.I1(), face4.I2(), face4.I3()); if (vert2face.Used (face)) { facenum = vert2face.Get(face); } else { if (pass == 2) cout << "hier in pass 2" << endl; nfa++; vert2face.Set (face, nfa); facenum = nfa; INDEX_4 hface(face4.I1(),face4.I2(),face4.I3(),face4.I4()); face2vert.Append (hface); } faces[elnr][j].fnr = facenum-1; faces[elnr][j].forient = facedir; } */ } } for (SurfaceElementIndex elnr : top.GetVertexSurfaceElements(v)) { const Element2d & el = mesh[elnr]; const ELEMENT_FACE * elfaces = MeshTopology::GetFaces1 (el.GetType()); if (elfaces[0][3] == 0) { // triangle // int facenum; int facedir; INDEX_4 face(el.PNum(elfaces[0][0]), el.PNum(elfaces[0][1]), el.PNum(elfaces[0][2]),0); facedir = 0; if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 1; } if (face.I2() > face.I3()) { swap (face.I2(), face.I3()); facedir += 2; } if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 4; } if (face.I1() != v) continue; func(face, elnr, 0, false, facedir); /* if (vert2face.Used (face)) facenum = vert2face.Get(face); else { nfa++; vert2face.Set (face, nfa); facenum = nfa; INDEX_4 hface(face.I1(),face.I2(),face.I3(),0); face2vert.Append (hface); } surffaces[elnr].fnr = facenum-1; surffaces[elnr].forient = facedir; */ } else { // quad // int facenum; int facedir; INDEX_4 face4(el.PNum(elfaces[0][0]), el.PNum(elfaces[0][1]), el.PNum(elfaces[0][2]), el.PNum(elfaces[0][3])); facedir = 0; if (min2 (face4.I1(), face4.I2()) > min2 (face4.I4(), face4.I3())) { // z - orientation facedir += 1; swap (face4.I1(), face4.I4()); swap (face4.I2(), face4.I3()); } if (min2 (face4.I1(), face4.I4()) > min2 (face4.I2(), face4.I3())) { // x - orientation facedir += 2; swap (face4.I1(), face4.I2()); swap (face4.I3(), face4.I4()); } if (face4.I2() > face4.I4()) { facedir += 4; swap (face4.I2(), face4.I4()); } if (face4.I1() != v) continue; func(face4, elnr, 0, false, facedir); /* INDEX_3 face(face4.I1(), face4.I2(), face4.I3()); if (vert2face.Used (face)) facenum = vert2face.Get(face); else { nfa++; vert2face.Set (face, nfa); facenum = nfa; INDEX_4 hface(face4.I1(),face4.I2(),face4.I3(),face4.I4()); face2vert.Append (hface); } surffaces[elnr].fnr = facenum-1; surffaces[elnr].forient = facedir; } */ } } } void MeshTopology :: Update (NgTaskManager tm_unused, NgTracer tracer) { static Timer timer("Topology::Update"); RegionTimer reg (timer); #ifdef PARALLEL // ParallelMeshTopology & paralleltop = mesh.GetParallelTopology(); #endif auto id = this->mesh->GetCommunicator().Rank(); auto ntasks = this->mesh->GetCommunicator().Size(); if (timestamp > mesh->GetTimeStamp()) return; int ne = mesh->GetNE(); int nse = mesh->GetNSE(); int nseg = mesh->GetNSeg(); int np = mesh->GetNP(); int nv = mesh->GetNV(); if (id == 0) PrintMessage (3, "Update mesh topology"); (*testout) << " UPDATE MESH TOPOLOGY " << endl; (*testout) << "ne = " << ne << endl; (*testout) << "nse = " << nse << endl; (*testout) << "nseg = " << nseg << endl; (*testout) << "np = " << np << endl; (*testout) << "nv = " << nv << endl; (*tracer) ("Topology::Update setup tables", false); NgArray cnt(nv); NgArray vnums; /* generate: vertex to element vertex to surface element vertex to segment */ cnt = 0; /* for (ElementIndex ei = 0; ei < ne; ei++) { const Element & el = (*mesh)[ei]; for (int j = 0; j < el.GetNV(); j++) cnt[el[j]]++; } */ ParallelForRange (ne, [&] (IntRange r) { for (ElementIndex ei : r) { const Element & el = (*mesh)[ei]; for (int j = 0; j < el.GetNV(); j++) AsAtomic(cnt[el[j]])++; } }); vert2element = TABLE (cnt); for (ElementIndex ei = 0; ei < ne; ei++) { const Element & el = (*mesh)[ei]; for (int j = 0; j < el.GetNV(); j++) vert2element.AddSave (el[j], ei); } /* ParallelForRange (tm, ne, [&] (size_t begin, size_t end) { for (ElementIndex ei = begin; ei < end; ei++) { const Element & el = (*mesh)[ei]; for (int j = 0; j < el.GetNV(); j++) vert2element.ParallelAdd (el[j], ei); } }); requires sorting !!!! */ cnt = 0; /* for (SurfaceElementIndex sei = 0; sei < nse; sei++) { const Element2d & el = (*mesh)[sei]; for (int j = 0; j < el.GetNV(); j++) cnt[el[j]]++; } */ ParallelForRange (nse, [&] (IntRange r) { for (SurfaceElementIndex ei : r) { const Element2d & el = (*mesh)[ei]; for (int j = 0; j < el.GetNV(); j++) AsAtomic(cnt[el[j]])++; } }); vert2surfelement = TABLE (cnt); for (SurfaceElementIndex sei = 0; sei < nse; sei++) { const Element2d & el = (*mesh)[sei]; for (int j = 0; j < el.GetNV(); j++) vert2surfelement.AddSave (el[j], sei); } /* ParallelForRange (tm, nse, [&] (size_t begin, size_t end) { for (SurfaceElementIndex sei = begin; sei < end; sei++) { const Element2d & el = (*mesh)[sei]; for (int j = 0; j < el.GetNV(); j++) vert2surfelement.ParallelAdd (el[j], sei); } }); requires sorting !!! */ cnt = 0; for (SegmentIndex si = 0; si < nseg; si++) { const Segment & seg = mesh->LineSegment(si); cnt[seg[0]]++; cnt[seg[1]]++; } vert2segment = TABLE (cnt); for (SegmentIndex si = 0; si < nseg; si++) { const Segment & seg = mesh->LineSegment(si); vert2segment.AddSave (seg[0], si); vert2segment.AddSave (seg[1], si); } cnt = 0; for (int pei = 0; pei < mesh->pointelements.Size(); pei++) { const Element0d & pointel = mesh->pointelements[pei]; cnt[pointel.pnum]++; } vert2pointelement = TABLE (cnt); for (int pei = 0; pei < mesh->pointelements.Size(); pei++) { const Element0d & pointel = mesh->pointelements[pei]; vert2pointelement.AddSave (pointel.pnum, pei); } (*tracer) ("Topology::Update setup tables", true); if (buildedges) { static int timer1 = NgProfiler::CreateTimer ("topology::buildedges"); NgProfiler::RegionTimer reg1 (timer1); if (id == 0) PrintMessage (5, "Update edges "); edges.SetSize(ne); surfedges.SetSize(nse); segedges.SetSize(nseg); for (int i = 0; i < ne; i++) for (int j = 0; j < 12; j++) edges[i][j].nr = -1; for (int i = 0; i < nse; i++) for (int j = 0; j < 4; j++) surfedges[i][j].nr = -1; // keep existing edges cnt = 0; for (int i = 0; i < edge2vert.Size(); i++) cnt[edge2vert[i][0]]++; TABLE vert2edge (cnt); for (int i = 0; i < edge2vert.Size(); i++) vert2edge.AddSave (edge2vert[i][0], i); // ensure all coarse grid and intermediate level edges cnt = 0; // for (int i = mesh->mlbetweennodes.Begin(); i < mesh->mlbetweennodes.End(); i++) for (int i : mesh->mlbetweennodes.Range()) { INDEX_2 parents = Sort (mesh->mlbetweennodes[i]); if (parents[0] >= PointIndex::BASE) cnt[parents[0]]++; } TABLE vert2vertcoarse (cnt); // for (int i = mesh->mlbetweennodes.Begin(); i < mesh->mlbetweennodes.End(); i++) for (int i : mesh->mlbetweennodes.Range()) { INDEX_2 parents = Sort (mesh->mlbetweennodes[i]); if (parents[0] >= PointIndex::BASE) vert2vertcoarse.AddSave (parents[0], parents[1]); } int max_edge_on_vertex = 0; for (int i = PointIndex::BASE; i < nv+PointIndex::BASE; i++) { int onv = vert2edge[i].Size() + vert2vertcoarse[i].Size() + 4*(vert2element)[i].Size() + 2*(vert2surfelement)[i].Size() + (vert2segment)[i].Size(); max_edge_on_vertex = max (onv, max_edge_on_vertex); } // count edges associated with vertices cnt = 0; ParallelForRange (mesh->GetNV(), // Points().Size(), [&] (IntRange r) { auto begin = r.First(); auto end = r.Next(); INDEX_CLOSED_HASHTABLE v2eht(2*max_edge_on_vertex+10); for (PointIndex v = begin+PointIndex::BASE; v < end+PointIndex::BASE; v++) { v2eht.DeleteData(); for (int ednr : vert2edge[v]) { int v2 = edge2vert[ednr][1]; v2eht.Set (v2, ednr); } int cnti = 0; for (int v2 : vert2vertcoarse[v]) if (!v2eht.Used(v2)) { cnti++; v2eht.Set (v2, 33); // some value } LoopOverEdges (*mesh, *this, v, [&] (INDEX_2 edge, int elnr, int loc_edge, int element_dim, int edgedir) { if (!v2eht.Used (edge.I2())) { cnti++; v2eht.Set (edge.I2(), 33); // something } }); cnt[v] = cnti; } } ); // accumulate number of edges int ned = edge2vert.Size(); // for (size_t v = 0; v < mesh->GetNV(); v++) for (size_t v : cnt.Range()) { auto hv = cnt[v]; cnt[v] = ned; ned += hv; } edge2vert.SetSize(ned); edge2segment.SetSize(ned); edge2segment = -1; // INDEX_CLOSED_HASHTABLE v2eht(2*max_edge_on_vertex+10); // NgArray vertex2; // for (PointIndex v = PointIndex::BASE; v < nv+PointIndex::BASE; v++) ParallelForRange (mesh->GetNV(), // Points().Size(), [&] (IntRange r) { auto begin = r.First(); auto end = r.Next(); INDEX_CLOSED_HASHTABLE v2eht(2*max_edge_on_vertex+10); NgArray vertex2; for (PointIndex v = begin+PointIndex::BASE; v < end+PointIndex::BASE; v++) { int ned = cnt[v]; v2eht.DeleteData(); vertex2.SetSize (0); for (int ednr : vert2edge[v]) { int v2 = edge2vert[ednr][1]; v2eht.Set (v2, ednr); } for (int v2 : vert2vertcoarse[v]) if (!v2eht.Used(v2)) { v2eht.Set (v2, 33); // some value vertex2.Append (v2); } LoopOverEdges (*mesh, *this, v, [&](INDEX_2 edge, int elnr, int loc_edge, int element_dim, int edgedir) { if (!v2eht.Used(edge.I2())) { vertex2.Append (edge.I2()); v2eht.Set (edge.I2(), 33); } }); QuickSort (vertex2); for (int j = 0; j < vertex2.Size(); j++) { v2eht.Set (vertex2[j], ned); edge2vert[ned] = INDEX_2 (v, vertex2[j]); ned++; } LoopOverEdges (*mesh, *this, v, [&](INDEX_2 edge, int elnr, int loc_edge, int element_dim, int edgedir) { int edgenum = v2eht.Get(edge.I2()); switch (element_dim) { case 3: edges[elnr][loc_edge].nr = edgenum; // edges[elnr][loc_edge].orient = edgedir; break; case 2: surfedges[elnr][loc_edge].nr = edgenum; // surfedges[elnr][loc_edge].orient = edgedir; break; case 1: segedges[elnr].nr = edgenum; edge2segment[edgenum] = elnr; // segedges[elnr].orient = edgedir; break; } }); } } ); if (build_parent_edges) { static Timer t("build_hierarchy"); RegionTimer reg(t); cnt = 0; for (auto verts : edge2vert) cnt[verts[0]]++; TABLE vert2edge (cnt); for (auto i : edge2vert.Range()) vert2edge.AddSave (edge2vert[i][0], i); // build edge hierarchy: parent_edges.SetSize (ned); parent_edges = { -1, { -1, -1, -1 } }; for (size_t i = 0; i < ned; i++) { auto verts = edge2vert[i]; // 2 vertices of edge if (verts[0] >= mesh->mlbetweennodes.Size()+PointIndex::BASE || verts[1] >= mesh->mlbetweennodes.Size()+PointIndex::BASE) continue; auto pa0 = mesh->mlbetweennodes[verts[0]]; // two parent vertices of v0 auto pa1 = mesh->mlbetweennodes[verts[1]]; // two parent vertices of v1 // both vertices are on coarsest mesh if (!pa0[0].IsValid() && !pa1[0].IsValid()) continue; int issplitedge = 0; if (pa0[0] == verts[1] || pa0[1] == verts[1]) issplitedge = 1; if (pa1[0] == verts[0] || pa1[1] == verts[0]) issplitedge = 2; if (issplitedge) { // cout << "split edge " << endl; // edge is obtained by splitting one edge into two parts: auto paedge = issplitedge == 1 ? pa0 : pa1; if (paedge[0] > paedge[1]) Swap (paedge[0], paedge[1]); for (int ednr : vert2edge[paedge[0]]) if (auto cverts = edge2vert[ednr]; cverts[1] == paedge[1]) { int orient = (paedge[0] == verts[0] || paedge[1] == verts[1]) ? 1 : 0; parent_edges[i] = { orient, { ednr, -1, -1 } }; } } else { // edge is splitting edge in middle of triangle: for (int j = 1; j <= 2; j++) { INT<2> paedge1, paedge2, paedge3; int orient_inner = 0; if (j == 1) { paedge1 = INT<2> (pa0[0], verts[1]); paedge2 = INT<2> (pa0[1], verts[1]); paedge3 = INT<2> (pa0[0], pa0[1]); orient_inner = 0; } else { paedge1 = INT<2> (pa1[0], verts[0]); paedge2 = INT<2> (pa1[1], verts[0]); paedge3 = INT<2> (pa1[0], pa1[1]); orient_inner = 1; } if (paedge1[0] > paedge1[1]) Swap (paedge1[0], paedge1[1]); if (paedge2[0] > paedge2[1]) Swap (paedge2[0], paedge2[1]); if (paedge3[0] > paedge3[1]) Swap (paedge3[0], paedge3[1]); // if first vertex number is -1, then don't try to find entry in node2edge hash table if ( paedge1[0] == PointIndex::BASE-1 || paedge2[0] == PointIndex::BASE-1 ) continue; int paedgenr1=-1, paedgenr2=-1, paedgenr3=-1, orient1 = 0, orient2 = 0; for (int ednr : vert2edge[paedge1[0]]) if (auto cverts = edge2vert[ednr]; cverts[1] == paedge1[1]) { paedgenr1 = ednr; orient1 = (paedge1[0] == verts[0] || paedge1[1] == verts[1]) ? 1 : 0; } for (int ednr : vert2edge[paedge2[0]]) if (auto cverts = edge2vert[ednr]; cverts[1] == paedge2[1]) { paedgenr2 = ednr; orient2 = (paedge2[0] == verts[0] || paedge2[1] == verts[1]) ? 1 : 0; } for (int ednr : vert2edge[paedge3[0]]) if (auto cverts = edge2vert[ednr]; cverts[1] == paedge3[1]) paedgenr3 = ednr; if (paedgenr1 != -1 && paedgenr2 != -1) parent_edges[i] = { orient1+2*orient2+4*orient_inner, { paedgenr1, paedgenr2, paedgenr3 } }; } // TODO: quad edges /* if (parentedges[i][0] == -1) { // quad split if (pa1[0] != pa2[0] && pa1[0] != pa2[1] && pa1[1] != pa2[0] && pa1[1] != pa2[1]) for (int j = 1; j <= 2; j++) { INT<2> paedge1, paedge2; if (j == 1) { paedge1 = INT<2> (pa1[0], pa2[0]); paedge2 = INT<2> (pa1[1], pa2[1]); } else { paedge1 = INT<2> (pa1[0], pa2[1]); paedge2 = INT<2> (pa1[1], pa2[0]); } int paedgenr1 = 0, paedgenr2 = 0; int orient1 = 1, orient2 = 1; if (paedge1[0] > paedge1[1]) { Swap (paedge1[0], paedge1[1]); orient1 = 0; } if (paedge2[0] > paedge2[1]) { Swap (paedge2[0], paedge2[1]); orient2 = 0; } if ( paedge1[0] == -1 || paedge2[0] == -1 ) continue; if (node2edge.Used (paedge1) && node2edge.Used (paedge2)) { paedgenr1 = node2edge.Get (paedge1); paedgenr2 = node2edge.Get (paedge2); parentedges[i][0] = 2 * paedgenr1 + orient1; parentedges[i][1] = 2 * paedgenr2 + orient2; } } } if (parentedges[i][0] == -1) { // triangle split into quad+trig (from anisotropic pyramids) for (int j = 0; j < 2; j++) for (int k = 0; k < 2; k++) { INT<2> paedge (pa1[1-j], pa2[1-k]); int orientpa = 1; if (paedge[0] > paedge[1]) { Swap (paedge[0], paedge[1]); orientpa = 0; } if (pa1[j] == pa2[k] && node2edge.Used(paedge)) { int paedgenr = node2edge.Get (paedge); parentedges[i][0] = 2 * paedgenr + orientpa; } } } */ } } /* for (int i : Range(parent_edges)) { auto [info, nrs] = parent_edges[i]; cout << "edge " << i << " has " << info << ", nrs = " << nrs[0] << " " << nrs[1] << endl; } */ } } // edge hashtable:: needed for getting parent faces ngcore::ClosedHashTable, int> v2e(nv); if (build_parent_faces) for (auto i : Range(edge2vert)) { auto edge = edge2vert[i]; INT<2> e2(edge[0], edge[1]); e2.Sort(); v2e[e2] = i; } // generate faces if (buildfaces) { static int timer2 = NgProfiler::CreateTimer ("topology::buildfaces"); // static int timer2a = NgProfiler::CreateTimer ("topology::buildfacesa"); // static int timer2b = NgProfiler::CreateTimer ("topology::buildfacesb"); // static int timer2b1 = NgProfiler::CreateTimer ("topology::buildfacesb1"); // static int timer2c = NgProfiler::CreateTimer ("topology::buildfacesc"); NgProfiler::RegionTimer reg2 (timer2); if (id == 0) PrintMessage (5, "Update faces "); // NgProfiler::StartTimer (timer2a); faces.SetSize(ne); surffaces.SetSize(nse); cnt = 0; for (int i = 0; i < face2vert.Size(); i++) cnt[face2vert[i][0]]++; TABLE vert2oldface(cnt); for (int i = 0; i < face2vert.Size(); i++) vert2oldface.AddSave (face2vert[i][0], i); // find all potential intermediate faces Array> intermediate_faces; if (build_parent_faces) { for (ElementIndex ei = 0; ei < ne; ei++) for (int i = 0; i < 4; i++) { Element2d face; // cout << "element: " << (*mesh)[ei].PNums() << endl; (*mesh)[ei].GetFace(i+1, face); // cout << "face " << face.PNums() << endl; INT<3,PointIndex> f3 = { face[0], face[1], face[2] }; for (int j = 0; j < 3; j++) { PointIndex v = f3[j]; if (v >= mesh->mlbetweennodes.Size()+PointIndex::BASE) continue; auto pa = mesh->mlbetweennodes[v]; for (int k = 0; k < 2; k++) if (f3.Contains(pa[k])) { PointIndex v0 = pa[k]; // also in face PointIndex v1 = pa[1-k]; PointIndex v2 = f3[0]+f3[1]+f3[2] - v - v0; // if there is an edge connecting v1 and v2, accept // the new face INT<2> parentedge(v1, v2); parentedge.Sort(); if (v2e.Used(parentedge)){ INT<3> cf3 = { v0, v1, v2 }; cf3.Sort(); // cout << "intermediate: " << cf3 << " of " << f3 << endl; intermediate_faces.Append (cf3); } } } } } cnt = 0; for (int i = 0; i < intermediate_faces.Size(); i++) cnt[intermediate_faces[i][0]]++; TABLE vert2intermediate(cnt); for (int i = 0; i < intermediate_faces.Size(); i++) vert2intermediate.AddSave (intermediate_faces[i][0], i); // cout << "vert2intermediate = " << endl << vert2intermediate << endl; for (int elnr = 0; elnr < ne; elnr++) for (int j = 0; j < 6; j++) faces[elnr][j].fnr = -1; int max_face_on_vertex = 0; for (int i = PointIndex::BASE; i < nv+PointIndex::BASE; i++) { int onv = vert2oldface[i].Size() + vert2element[i].Size() + vert2surfelement[i].Size(); max_face_on_vertex = max (onv, max_face_on_vertex); } // NgProfiler::StopTimer (timer2a); // NgProfiler::StartTimer (timer2b); // INDEX_3_CLOSED_HASHTABLE vert2face(2*max_face_on_vertex+10); int oldnfa = face2vert.Size(); // count faces associated with vertices cnt = 0; // for (auto v : mesh.Points().Range()) // NgProfiler::StartTimer (timer2b1); ParallelForRange (mesh->GetNV(), // Points().Size(), [&] (IntRange r) { auto begin = r.First(); auto end = r.Next(); INDEX_3_CLOSED_HASHTABLE vert2face(2*max_face_on_vertex+10); for (PointIndex v = begin+PointIndex::BASE; v < end+PointIndex::BASE; v++) { vert2face.DeleteData(); for (int j = 0; j < vert2oldface[v].Size(); j++) { int fnr = vert2oldface[v][j]; INDEX_3 face (face2vert[fnr].I1(), face2vert[fnr].I2(), face2vert[fnr].I3()); vert2face.Set (face, 33); // something } int cnti = 0; for (int j = 0; j < vert2intermediate[v].Size(); j++) { int fnr = vert2intermediate[v][j]; INDEX_3 face (intermediate_faces[fnr][0], intermediate_faces[fnr][1], intermediate_faces[fnr][2]); face.Sort(); if (!vert2face.Used(face)) { cnti++; vert2face.Set (face, 33); // something } } LoopOverFaces (*mesh, *this, v, [&] (INDEX_4 i4, int elnr, int j, bool volume, int facedir) { INDEX_3 face(i4.I1(), i4.I2(), i4.I3()); if (!vert2face.Used (face)) { cnti++; vert2face.Set (face, 33); // something } }); cnt[v] = cnti; } } ); // NgProfiler::StopTimer (timer2b1); // accumulate number of faces int nfa = oldnfa; // for (auto v : Range(mesh->GetNV())) // Points().Range()) // for (size_t v = 0; v < mesh->GetNV(); v++) for (auto v : cnt.Range()) { auto hv = cnt[v]; cnt[v] = nfa; nfa += hv; } face2vert.SetSize(nfa); // for (auto v : mesh.Points().Range()) ParallelForRange (mesh->GetNV(), // Points().Size(), [&] (IntRange r) { auto begin = r.First(); auto end = r.Next(); INDEX_3_CLOSED_HASHTABLE vert2face(2*max_face_on_vertex+10); for (PointIndex v = begin+PointIndex::BASE; v < end+PointIndex::BASE; v++) { int first_fa = cnt[v]; int nfa = first_fa; vert2face.DeleteData(); for (int j = 0; j < vert2oldface[v].Size(); j++) { int fnr = vert2oldface[v][j]; INDEX_3 face (face2vert[fnr].I1(), face2vert[fnr].I2(), face2vert[fnr].I3()); vert2face.Set (face, fnr); } for (int j = 0; j < vert2intermediate[v].Size(); j++) { int fnr = vert2intermediate[v][j]; INDEX_3 face (intermediate_faces[fnr][0], intermediate_faces[fnr][1], intermediate_faces[fnr][2]); face.Sort(); if (!vert2face.Used(face)) { INDEX_4 i4(face.I1(), face.I2(), face.I3(), 0); face2vert[nfa] = i4; vert2face.Set (face, nfa); nfa++; // cout << "adding face " << i4 << endl; // cnti++; // vert2face.Set (face, 33); // something } } LoopOverFaces (*mesh, *this, v, [&] (INDEX_4 i4, int elnr, int j, bool volume, int facedir) { INDEX_3 face(i4.I1(), i4.I2(), i4.I3()); if (!vert2face.Used (face)) { face2vert[nfa] = i4; vert2face.Set (face, nfa); nfa++; } }); QuickSort (face2vert.Range(first_fa, nfa)); for (int j = first_fa; j < nfa; j++) { if (face2vert[j][0] == v) { INDEX_3 face (face2vert[j].I1(), face2vert[j].I2(), face2vert[j].I3()); vert2face.Set (face, j); } else break; } LoopOverFaces (*mesh, *this, v, [&] (INDEX_4 i4, int elnr, int j, bool volume, int facedir) { INDEX_3 face(i4.I1(), i4.I2(), i4.I3()); int facenum = vert2face.Get(face); if (volume) { faces[elnr][j].fnr = facenum; // faces[elnr][j].forient = facedir; } else { surffaces[elnr].fnr = facenum; // surffaces[elnr].forient = facedir; } }); } }); /* int oldnfa = face2vert.Size(); int nfa = oldnfa; INDEX_3_CLOSED_HASHTABLE vert2face(2*max_face_on_vertex+10); for (auto v : mesh.Points().Range()) { int first_fa = nfa; vert2face.DeleteData(); for (int j = 0; j < vert2oldface[v].Size(); j++) { int fnr = vert2oldface[v][j]; INDEX_3 face (face2vert[fnr].I1(), face2vert[fnr].I2(), face2vert[fnr].I3()); vert2face.Set (face, fnr+1); } for (int pass = 1; pass <= 2; pass++) { for (ElementIndex elnr : (*vert2element)[v]) { const Element & el = mesh[elnr]; int nelfaces = GetNFaces (el.GetType()); const ELEMENT_FACE * elfaces = GetFaces0 (el.GetType()); for (int j = 0; j < nelfaces; j++) if (elfaces[j][3] < 0) { // triangle INDEX_3 face(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]]); int facedir = 0; if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 1; } if (face.I2() > face.I3()) { swap (face.I2(), face.I3()); facedir += 2; } if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 4; } if (face.I1() != v) continue; if (pass == 1) { if (!vert2face.Used (face)) { nfa++; vert2face.Set (face, nfa); INDEX_4 hface(face.I1(),face.I2(),face.I3(),0); face2vert.Append (hface); } } else { int facenum = vert2face.Get(face); faces[elnr][j].fnr = facenum-1; faces[elnr][j].forient = facedir; } } else { // quad int facenum; INDEX_4Q face4(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]], el[elfaces[j][3]]); int facedir = 0; if (min2 (face4.I1(), face4.I2()) > min2 (face4.I4(), face4.I3())) { // z - flip facedir += 1; swap (face4.I1(), face4.I4()); swap (face4.I2(), face4.I3()); } if (min2 (face4.I1(), face4.I4()) > min2 (face4.I2(), face4.I3())) { // x - flip facedir += 2; swap (face4.I1(), face4.I2()); swap (face4.I3(), face4.I4()); } if (face4.I2() > face4.I4()) { // diagonal flip facedir += 4; swap (face4.I2(), face4.I4()); } INDEX_3 face(face4.I1(), face4.I2(), face4.I3()); if (face.I1() != v) continue; if (vert2face.Used (face)) { facenum = vert2face.Get(face); } else { if (pass == 2) cout << "hier in pass 2" << endl; nfa++; vert2face.Set (face, nfa); facenum = nfa; INDEX_4 hface(face4.I1(),face4.I2(),face4.I3(),face4.I4()); face2vert.Append (hface); } faces[elnr][j].fnr = facenum-1; faces[elnr][j].forient = facedir; } } for (int j = 0; j < (*vert2surfelement)[v].Size(); j++) { SurfaceElementIndex elnr = (*vert2surfelement)[v][j]; const Element2d & el = mesh.SurfaceElement (elnr); const ELEMENT_FACE * elfaces = GetFaces1 (el.GetType()); if (elfaces[0][3] == 0) { // triangle int facenum; int facedir; INDEX_3 face(el.PNum(elfaces[0][0]), el.PNum(elfaces[0][1]), el.PNum(elfaces[0][2])); facedir = 0; if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 1; } if (face.I2() > face.I3()) { swap (face.I2(), face.I3()); facedir += 2; } if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 4; } if (face.I1() != v) continue; if (vert2face.Used (face)) facenum = vert2face.Get(face); else { nfa++; vert2face.Set (face, nfa); facenum = nfa; INDEX_4 hface(face.I1(),face.I2(),face.I3(),0); face2vert.Append (hface); } surffaces[elnr].fnr = facenum-1; surffaces[elnr].forient = facedir; } else { // quad int facenum; int facedir; INDEX_4Q face4(el.PNum(elfaces[0][0]), el.PNum(elfaces[0][1]), el.PNum(elfaces[0][2]), el.PNum(elfaces[0][3])); facedir = 0; if (min2 (face4.I1(), face4.I2()) > min2 (face4.I4(), face4.I3())) { // z - orientation facedir += 1; swap (face4.I1(), face4.I4()); swap (face4.I2(), face4.I3()); } if (min2 (face4.I1(), face4.I4()) > min2 (face4.I2(), face4.I3())) { // x - orientation facedir += 2; swap (face4.I1(), face4.I2()); swap (face4.I3(), face4.I4()); } if (face4.I2() > face4.I4()) { facedir += 4; swap (face4.I2(), face4.I4()); } INDEX_3 face(face4.I1(), face4.I2(), face4.I3()); if (face.I1() != v) continue; if (vert2face.Used (face)) facenum = vert2face.Get(face); else { nfa++; vert2face.Set (face, nfa); facenum = nfa; INDEX_4 hface(face4.I1(),face4.I2(),face4.I3(),face4.I4()); face2vert.Append (hface); } surffaces[elnr].fnr = facenum-1; surffaces[elnr].forient = facedir; } } // sort faces if (pass == 1) { QuickSort (face2vert.Range(first_fa, nfa)); for (int j = first_fa; j < face2vert.Size(); j++) { if (face2vert[j][0] == v) { INDEX_3 face (face2vert[j].I1(), face2vert[j].I2(), face2vert[j].I3()); vert2face.Set (face, j+1); } else break; } } } } face2vert.SetAllocSize (nfa); */ // *testout << "face2vert = " << endl << face2vert << endl; // NgProfiler::StopTimer (timer2b); // NgProfiler::StartTimer (timer2c); face2surfel.SetSize (nfa); face2surfel = 0; for (int i = 1; i <= nse; i++) face2surfel.Elem(GetSurfaceElementFace(i)) = i; /* cout << "build table complete" << endl; cout << "faces = " << endl; cout << "face2vert = " << endl << face2vert << endl; cout << "surffaces = " << endl << surffaces << endl; cout << "face2surfel = " << endl << face2surfel << endl; */ surf2volelement.SetSize (nse); for (int i = 1; i <= nse; i++) { surf2volelement.Elem(i)[0] = 0; surf2volelement.Elem(i)[1] = 0; } (*tracer) ("Topology::Update build surf2vol", false); for (int i = 1; i <= ne; i++) for (int j = 0; j < 6; j++) { // int fnum = (faces.Get(i)[j]+7) / 8; int fnum = faces.Get(i)[j].fnr+1; if (fnum > 0 && face2surfel.Elem(fnum)) { int sel = face2surfel.Elem(fnum); surf2volelement.Elem(sel)[1] = surf2volelement.Elem(sel)[0]; surf2volelement.Elem(sel)[0] = i; } } (*tracer) ("Topology::Update build surf2vol", true); face2vert.SetAllocSize (face2vert.Size()); // face table complete #ifdef PARALLEL // (*testout) << " RESET Paralleltop" << endl; // paralleltop.Reset (); #endif (*tracer) ("Topology::Update count face_els", false); NgArray face_els(nfa), face_surfels(nfa); face_els = 0; face_surfels = 0; /* NgArray hfaces; for (int i = 1; i <= ne; i++) { GetElementFaces (i, hfaces); for (int j = 0; j < hfaces.Size(); j++) face_els[hfaces[j]-1]++; } */ ParallelForRange (ne, [&] (IntRange r) { NgArray hfaces; for (ElementIndex ei : r) { GetElementFaces (ei+1, hfaces); for (auto f : hfaces) AsAtomic(face_els[f-1])++; } }); for (int i = 1; i <= nse; i++) face_surfels[GetSurfaceElementFace (i)-1]++; (*tracer) ("Topology::Update count face_els", true); if (ne) { int cnt_err = 0; for (int i = 0; i < nfa; i++) { /* (*testout) << "face " << i << " has " << int(face_els[i]) << " els, " << int(face_surfels[i]) << " surfels, tot = " << face_els[i] + face_surfels[i] << endl; */ if (face_els[i] + face_surfels[i] == 1) { cnt_err++; #ifdef PARALLEL if ( ntasks > 1 ) { continue; // if ( !paralleltop.DoCoarseUpdate() ) continue; } else #endif { (*testout) << "illegal face : " << i << endl; (*testout) << "points = " << face2vert[i] << endl; (*testout) << "pos = "; for (int j = 0; j < 4; j++) if (face2vert[i].I(j+1) >= 1) (*testout) << (*mesh)[(PointIndex)face2vert[i].I(j+1)] << " "; (*testout) << endl; NgFlatArray vertels = GetVertexElements (face2vert[i].I(1)); for (int k = 0; k < vertels.Size(); k++) { int elfaces[10], orient[10]; int nf = GetElementFaces (vertels[k]+1, elfaces, orient); for (int l = 0; l < nf; l++) if (elfaces[l] == i) { // (*testout) << "is face of element " << vertels[k] << endl; if (mesh->coarsemesh && mesh->hpelements->Size() == mesh->GetNE() ) { const HPRefElement & hpref_el = (*mesh->hpelements) [ (*mesh)[vertels[k]].hp_elnr]; (*testout) << "coarse eleme = " << hpref_el.coarse_elnr << endl; } } } } } } if (cnt_err && ntasks == 1) cout << cnt_err << " elements are not matching !!!" << endl; } // NgProfiler::StopTimer (timer2c); if (build_parent_faces) { // tets only if (id == 0) PrintMessage (5, "build face hierarchy"); // cout << "f2v = " << face2vert << endl; ngcore::ClosedHashTable, int> v2f(nv); for (auto i : Range(face2vert)) { auto face = face2vert[i]; INT<3> f3(face[0], face[1], face[2]); f3.Sort(); v2f[f3] = i; } // cout << "v2f:" << endl << v2f << endl; parent_faces.SetSize (nfa); parent_faces = { -1, { -1, -1, -1, -1 } }; for (auto i : Range(nfa)) { INT<3,PointIndex> f3(face2vert[i][0], face2vert[i][1], face2vert[i][2]); // face on coarses level ? bool all_vert_coarse = true; for (int k = 0; k < 3; k++) { PointIndex vb = f3[k]; if (vb >= mesh->mlbetweennodes.Size()+PointIndex::BASE) continue; auto parents = mesh->mlbetweennodes[vb]; if (parents[0] >= PointIndex::BASE) all_vert_coarse = false; } if (all_vert_coarse) continue; // find a vertex, such that one of its parent is a trig vertex bool issplit = false; for (int k = 0; k < 3; k++) { PointIndex vb = f3[k]; // assume vb as the new bisect vert if (vb >= mesh->mlbetweennodes.Size()+PointIndex::BASE) continue; auto parents = mesh->mlbetweennodes[vb]; // is face part of one parent face (boundary-face) ? for (int j = 0; j < 2; j++) { if (f3.Contains(parents[j])) { PointIndex v0 = parents[j]; PointIndex v1 = parents[1-j]; // the third one, on the tip PointIndex v2 = f3[0]+f3[1]+f3[2] - v0 - vb; // if there is an edge connecting v1 and v2, accept // the new face INT<2> parentedge(v1, v2); parentedge.Sort(); if (v2e.Used(parentedge)){ INT<3> parentverts(v0, v1, v2); parentverts.Sort(); int classnr = 0; if (v2 > vb) { Swap (v2, vb); classnr += 1; } if (v0 > v1) { Swap (v0, v1); classnr += 2; } if (v1 > v2) { Swap (v1, v2); classnr += 4; } if (v0 > v1) { Swap (v0, v1); classnr += 8; } if (v2f.Used(parentverts)) { int pafacenr = v2f[parentverts]; // cout << "parent-face = " << pafacenr << endl; parent_faces[i] = { classnr, { pafacenr, -1, -1, -1 } }; } else { cout << "missing parent face: " << parentverts << endl; } issplit=true; break; } } } } /* // is face a new face (bisect-face) ? if (!issplit) for (int k = 0; k < 3; k++) { PointIndex vb = f3[k]; // assume vb as the new bisect vert if (vb >= mesh->mlbetweennodes.Size()+PointIndex::BASE) continue; auto parents = mesh->mlbetweennodes[vb]; PointIndex v0 = parents[0]; PointIndex v1 = parents[1]; PointIndex v2 = f3[(k+1)%3]; PointIndex v3 = f3[(k+2)%3]; INT<3> parentedge1(v0, v2); parentedge1.Sort(); INT<3> parentedge2(v0, v3); parentedge2.Sort(); INT<3> parentedge3(v1, v2); parentedge3.Sort(); INT<3> parentedge4(v1, v3); parentedge4.Sort(); // if edges [v0,v2], [v0, v3], [v1,v2], [v1,v3] exists // then vb is the bisecting edge if (v2e.Used(parentedge1) && v2e.Used(parentedge2) && v2e.Used(parentedge3) && v2e.Used(parentedge4) ){ int classnr; if (k==2){// vb is the largest vert: 6 cases // by default v0 < v1, v2 < v3 if (v1 < v2) classnr = 0; else if (v1 < v3 && v0 < v2) classnr = 1; else if (v0 < v2) classnr = 2; else if (v1 < v3) classnr = 3; else if (v0 < v3) classnr = 4; else classnr = 5; }else if (k==1){// vb is the second largest vert: 3 cases // by default v0 < v1, v3 < v2 if (v1 < v3) classnr = 6; else if (v0 < v3) classnr = 7; else classnr = 8; }else {// vb is the third largest vert: 1 case // by default v0 < v1 < vb < v2 < v3 classnr=9; } INT<3> parentverts1(v0, v2, v3); parentverts1.Sort(); INT<3> parentverts2(v1, v2, v3); parentverts2.Sort(); INT<3> parentverts3(v0, v1, v2); parentverts3.Sort(); INT<3> parentverts4(v0, v1, v3); parentverts4.Sort(); int pafacenr1=-1, pafacenr2=-1, pafacenr3=-1, pafacenr4=-1; if (v2f.Used(parentverts1)) { pafacenr1 = v2f[parentverts1]; // cout << "parent-face1 = " << pafacenr1<< endl ; } if (v2f.Used(parentverts2)) { pafacenr2 = v2f[parentverts2]; // cout << "parent-face2 = " << pafacenr2<< endl ; } if (v2f.Used(parentverts3)) { pafacenr3 = v2f[parentverts3]; // cout << "parent-face3 = " << pafacenr3<< endl ; } if (v2f.Used(parentverts4)) { pafacenr4 = v2f[parentverts4]; // cout << "parent-face4 = " << pafacenr4<< endl ; } if (k == 0 || k == 2) parent_faces[i] = { classnr, { pafacenr2, pafacenr1, pafacenr4, pafacenr3} }; else parent_faces[i] = { classnr, { pafacenr2, pafacenr1, pafacenr3, pafacenr4} }; break; } } */ // is face a new face (bisect-face) ? if (!issplit) for (int k = 0; k < 3; k++) { PointIndex vb = f3[k]; // assume vb as the new bisect vert if (vb >= mesh->mlbetweennodes.Size()+PointIndex::BASE) continue; auto parents = mesh->mlbetweennodes[vb]; PointIndex v0 = parents[0]; PointIndex v1 = parents[1]; PointIndex v2 = f3[(k+1)%3]; PointIndex v3 = f3[(k+2)%3]; INT<2> parentedge1(v0, v2); parentedge1.Sort(); INT<2> parentedge2(v0, v3); parentedge2.Sort(); INT<2> parentedge3(v1, v2); parentedge3.Sort(); INT<2> parentedge4(v1, v3); parentedge4.Sort(); // if edges [v0,v2], [v0, v3], [v1,v2], [v1,v3] exists // then vb is the bisecting edge if (v2e.Used(parentedge1) && v2e.Used(parentedge2) && v2e.Used(parentedge3) && v2e.Used(parentedge4)) { int verts[5] = { v0, v1, v2, v3, vb }; /* cout << "verts5: "; for (int j = 0; j < 5; j++) cout << verts[j] << " "; */ // classify permutation of verts int classnr = 0; for (int j = 0; j < 4; j++) { int maxk = 0; for (int k = 0; k < 5-j; k++) if (verts[k] > verts[maxk]) maxk = k; // compress for (int k = maxk; k < 4-j; k++) verts[k] = verts[k+1]; classnr = maxk + (5-j) * classnr; } // cout << "classnr = " << classnr << endl; INT<3> parentverts1(v1, v2, v3); parentverts1.Sort(); INT<3> parentverts2(v0, v2, v3); parentverts2.Sort(); INT<3> parentverts3(v0, v1, v3); parentverts3.Sort(); INT<3> parentverts4(v0, v1, v2); parentverts4.Sort(); if (!v2f.Used(parentverts1) || !v2f.Used(parentverts2) || !v2f.Used(parentverts3) || !v2f.Used(parentverts4)) { cout << "all edges are used, but not faces ????" << endl; continue; } int pafacenr1 = v2f[parentverts1]; int pafacenr2 = v2f[parentverts2]; int pafacenr3 = v2f[parentverts3]; int pafacenr4 = v2f[parentverts4]; parent_faces[i] = { classnr, { pafacenr1, pafacenr2, pafacenr3, pafacenr4} }; break; } } auto [info, nrs] = parent_faces[i]; if (nrs[0] == -1) cout << "************************** unhandled parent-face case **********************" << endl; } } } #ifdef PARALLEL if (id != 0) { // if ( paralleltop.DoCoarseUpdate() ) // paralleltop.UpdateCoarseGrid(); } #endif /* for (i = 1; i <= ne; i++) { (*testout) << "Element " << i << endl; (*testout) << "PNums " << endl; for( int l=1;l<=8;l++) *testout << mesh.VolumeElement(i).PNum(l) << "\t"; *testout << endl; (*testout) << "edges: " << endl; for (j = 0; j < 9; j++) (*testout) << edges.Elem(i)[j] << " "; (*testout) << "faces: " << endl; for (j = 0; j < 6; j++)m (*testout) << faces.Elem(i)[j] << " "; } for (i = 1; i <= nse; i++) { (*testout) << "SElement " << i << endl; (*testout) << "PNums " << endl; for( int l=1;l<=4;l++) *testout << mesh.SurfaceElement(i).PNum(l) << "\t"; *testout << endl; } */ timestamp = NextTimeStamp(); } const Point3d * MeshTopology :: GetVertices (ELEMENT_TYPE et) { static Point3d segm_points [] = { Point3d (1, 0, 0), Point3d (0, 0, 0) }; static Point3d trig_points [] = { Point3d ( 1, 0, 0 ), Point3d ( 0, 1, 0 ), Point3d ( 0, 0, 0 ) }; static Point3d quad_points [] = { Point3d ( 0, 0, 0 ), Point3d ( 1, 0, 0 ), Point3d ( 1, 1, 0 ), Point3d ( 0, 1, 0 ) }; static Point3d tet_points [] = { Point3d ( 1, 0, 0 ), Point3d ( 0, 1, 0 ), Point3d ( 0, 0, 1 ), Point3d ( 0, 0, 0 ) }; static Point3d pyramid_points [] = { Point3d ( 0, 0, 0 ), Point3d ( 1, 0, 0 ), Point3d ( 1, 1, 0 ), Point3d ( 0, 1, 0 ), Point3d ( 0, 0, 1-1e-7 ), }; static Point3d prism_points[] = { Point3d ( 1, 0, 0 ), Point3d ( 0, 1, 0 ), Point3d ( 0, 0, 0 ), Point3d ( 1, 0, 1 ), Point3d ( 0, 1, 1 ), Point3d ( 0, 0, 1 ) }; static Point3d hex_points [] = { Point3d ( 0, 0, 0 ), Point3d ( 1, 0, 0 ), Point3d ( 1, 1, 0 ), Point3d ( 0, 1, 0 ), Point3d ( 0, 0, 1 ), Point3d ( 1, 0, 1 ), Point3d ( 1, 1, 1 ), Point3d ( 0, 1, 1 ) }; switch (et) { case SEGMENT: case SEGMENT3: return segm_points; case TRIG: case TRIG6: return trig_points; case QUAD: case QUAD6: case QUAD8: return quad_points; case TET: case TET10: return tet_points; case PYRAMID: return pyramid_points; case PRISM: case PRISM12: return prism_points; case HEX: return hex_points; default: cerr << "Ng_ME_GetVertices, illegal element type " << et << endl; } return 0; } void MeshTopology :: GetElementEdges (int elnr, NgArray & eledges) const { int ned = GetNEdges (mesh->VolumeElement(elnr).GetType()); eledges.SetSize (ned); for (int i = 0; i < ned; i++) eledges[i] = edges.Get(elnr)[i].nr+1; // eledges[i] = abs (edges.Get(elnr)[i]); } void MeshTopology :: GetElementFaces (int elnr, NgArray & elfaces, bool withorientation) const { int nfa = GetNFaces (mesh->VolumeElement(elnr).GetType()); elfaces.SetSize (nfa); if (!withorientation) for (int i = 1; i <= nfa; i++) { // elfaces.Elem(i) = (faces.Get(elnr)[i-1]-1) / 8 + 1; elfaces.Elem(i) = faces.Get(elnr)[i-1].fnr+1; } else { cerr << "GetElementFaces with orientation currently not supported" << endl; /* for (int i = 1; i <= nfa; i++) { elfaces.Elem(i) = (faces.Get(elnr)[i-1]-1) / 8 + 1; int orient = (faces.Get(elnr)[i-1]-1) % 8; if(orient == 1 || orient == 2 || orient == 4 || orient == 7) elfaces.Elem(i) *= -1; } */ } } void MeshTopology :: GetElementEdgeOrientations (int elnr, NgArray & eorient) const { int ned = GetNEdges (mesh->VolumeElement(elnr).GetType()); eorient.SetSize (ned); for (int i = 1; i <= ned; i++) // eorient.Elem(i) = (edges.Get(elnr)[i-1] > 0) ? 1 : -1; // eorient.Elem(i) = (edges.Get(elnr)[i-1].orient) ? -1 : 1; eorient.Elem(i) = GetElementEdgeOrientation (elnr, i-1) ? -1 : 1; } void MeshTopology :: GetElementFaceOrientations (int elnr, NgArray & forient) const { int nfa = GetNFaces (mesh->VolumeElement(elnr).GetType()); forient.SetSize (nfa); for (int i = 1; i <= nfa; i++) // forient.Elem(i) = faces.Get(elnr)[i-1].forient; // forient.Elem(i) = (faces.Get(elnr)[i-1]-1) % 8; forient.Elem(i) = GetElementFaceOrientation(elnr, i-1); } int MeshTopology :: GetElementEdges (int elnr, int * eledges, int * orient) const { // int ned = GetNEdges (mesh.VolumeElement(elnr).GetType()); if (mesh->GetDimension()==3 || 1) { if (orient) { for (int i = 0; i < 12; i++) { /* if (!edges.Get(elnr)[i]) return i; eledges[i] = abs (edges.Get(elnr)[i]); orient[i] = (edges.Get(elnr)[i] > 0 ) ? 1 : -1; */ if (edges.Get(elnr)[i].nr == -1) return i; eledges[i] = edges.Get(elnr)[i].nr+1; // orient[i] = edges.Get(elnr)[i].orient ? -1 : 1; orient[i] = GetElementEdgeOrientation(elnr, i) ? -1 : 1; } } else { for (int i = 0; i < 12; i++) { // if (!edges.Get(elnr)[i]) return i; // eledges[i] = abs (edges.Get(elnr)[i]); if (edges.Get(elnr)[i].nr == -1) return i; eledges[i] = edges.Get(elnr)[i].nr+1; } } return 12; } else { throw NgException("rethink implementation"); /* if (orient) { for (i = 0; i < 4; i++) { if (!surfedges.Get(elnr)[i]) return i; eledges[i] = abs (surfedges.Get(elnr)[i]); orient[i] = (surfedges.Get(elnr)[i] > 0 ) ? 1 : -1; } } else { if (!surfedges.Get(elnr)[i]) return i; for (i = 0; i < 4; i++) eledges[i] = abs (surfedges.Get(elnr)[i]); } */ return 4; // return GetSurfaceElementEdges (elnr, eledges, orient); } } int MeshTopology :: GetElementFaces (int elnr, int * elfaces, int * orient) const { // int nfa = GetNFaces (mesh.VolumeElement(elnr).GetType()); if (orient) { for (int i = 0; i < 6; i++) { /* if (!faces.Get(elnr)[i]) return i; elfaces[i] = (faces.Get(elnr)[i]-1) / 8 + 1; orient[i] = (faces.Get(elnr)[i]-1) % 8; */ if (faces.Get(elnr)[i].fnr == -1) return i; elfaces[i] = faces.Get(elnr)[i].fnr+1; // orient[i] = faces.Get(elnr)[i].forient; orient[i] = GetElementFaceOrientation (elnr, i); } } else { for (int i = 0; i < 6; i++) { // if (!faces.Get(elnr)[i]) return i; // elfaces[i] = (faces.Get(elnr)[i]-1) / 8 + 1; if (faces.Get(elnr)[i].fnr == -1) return i; elfaces[i] = faces.Get(elnr)[i].fnr+1; } } return 6; } void MeshTopology :: GetSurfaceElementEdges (int elnr, NgArray & eledges) const { int ned = GetNEdges (mesh->SurfaceElement(elnr).GetType()); eledges.SetSize (ned); for (int i = 0; i < ned; i++) // eledges[i] = abs (surfedges.Get(elnr)[i]); eledges[i] = surfedges.Get(elnr)[i].nr+1; } void MeshTopology :: GetEdges (SurfaceElementIndex elnr, NgArray & eledges) const { int ned = GetNEdges ( (*mesh)[elnr].GetType()); eledges.SetSize (ned); for (int i = 0; i < ned; i++) // eledges[i] = abs (surfedges[elnr][i])-1; eledges[i] = surfedges[elnr][i].nr; } int MeshTopology :: GetSurfaceElementFace (int elnr) const { return surffaces.Get(elnr).fnr+1; } /* int MeshTopology :: GetFace (SurfaceElementIndex elnr) const { return surffaces[elnr].fnr; } */ void MeshTopology :: GetSurfaceElementEdgeOrientations (int elnr, NgArray & eorient) const { int ned = GetNEdges (mesh->SurfaceElement(elnr).GetType()); eorient.SetSize (ned); for (int i = 0; i < ned; i++) // eorient[i] = (surfedges.Get(elnr)[i] > 0) ? 1 : -1; // eorient[i] = (surfedges.Get(elnr)[i].orient) ? -1 : 1; eorient[i] = GetSurfaceElementEdgeOrientation(elnr, i) ? -1 : 1; } int MeshTopology :: GetSurfaceElementFaceOrientation (int elnr) const { // return (surffaces.Get(elnr)-1) % 8; // return surffaces.Get(elnr).forient; return GetSurfaceElementFaceOrientation2(elnr); } int MeshTopology :: GetSurfaceElementEdges (int elnr, int * eledges, int * orient) const { int i; if (mesh->GetDimension() == 3 || 1) { if (orient) { for (i = 0; i < 4; i++) { /* if (!surfedges.Get(elnr)[i]) return i; eledges[i] = abs (surfedges.Get(elnr)[i]); orient[i] = (surfedges.Get(elnr)[i] > 0 ) ? 1 : -1; */ if (surfedges.Get(elnr)[i].nr == -1) return i; eledges[i] = surfedges.Get(elnr)[i].nr+1; // orient[i] = (surfedges.Get(elnr)[i].orient) ? -1 : 1; orient[i] = GetSurfaceElementEdgeOrientation(elnr, i) ? -1 : 1; } } else { for (i = 0; i < 4; i++) { /* if (!surfedges.Get(elnr)[i]) return i; eledges[i] = abs (surfedges.Get(elnr)[i]); */ if (surfedges.Get(elnr)[i].nr == -1) return i; eledges[i] = surfedges.Get(elnr)[i].nr+1; } } return 4; } else { /* eledges[0] = abs (segedges.Get(elnr)); if (orient) orient[0] = segedges.Get(elnr) > 0 ? 1 : -1; */ eledges[0] = segedges.Get(elnr).nr+1; if (orient) // orient[0] = segedges.Get(elnr).orient ? -1 : 1; orient[0] = GetSegmentEdgeOrientation(elnr) ? -1 : 1; } return 1; } int MeshTopology :: GetElementEdgeOrientation (int elnr, int locedgenr) const { const Element & el = mesh->VolumeElement (elnr); const ELEMENT_EDGE * eledges = MeshTopology::GetEdges0 (el.GetType()); int k = locedgenr; INDEX_2 edge(el[eledges[k][0]], el[eledges[k][1]]); int edgedir = (edge.I1() > edge.I2()); return edgedir; } int MeshTopology :: GetElementFaceOrientation (int elnr, int locfacenr) const { const Element & el = mesh->VolumeElement (elnr); const ELEMENT_FACE * elfaces = MeshTopology::GetFaces0 (el.GetType()); int j = locfacenr; if (elfaces[j][3] < 0) { // triangle INDEX_4 face(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]], 0); int facedir = 0; if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 1; } if (face.I2() > face.I3()) { swap (face.I2(), face.I3()); facedir += 2; } if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 4; } return facedir; } else { // quad // int facenum; INDEX_4 face4(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]], el[elfaces[j][3]]); int facedir = 0; if (min2 (face4.I1(), face4.I2()) > min2 (face4.I4(), face4.I3())) { // z - flip facedir += 1; swap (face4.I1(), face4.I4()); swap (face4.I2(), face4.I3()); } if (min2 (face4.I1(), face4.I4()) > min2 (face4.I2(), face4.I3())) { // x - flip facedir += 2; swap (face4.I1(), face4.I2()); swap (face4.I3(), face4.I4()); } if (face4.I2() > face4.I4()) { // diagonal flip facedir += 4; swap (face4.I2(), face4.I4()); } return facedir; } } int MeshTopology :: GetSurfaceElementEdgeOrientation (int elnr, int locedgenr) const { const Element2d & el = mesh->SurfaceElement (elnr); const ELEMENT_EDGE * eledges = MeshTopology::GetEdges0 (el.GetType()); int k = locedgenr; INDEX_2 edge(el[eledges[k][0]], el[eledges[k][1]]); int edgedir = (edge.I1() > edge.I2()); return edgedir; } int MeshTopology :: GetSurfaceElementFaceOrientation2 (int elnr) const { const Element2d & el = mesh->SurfaceElement (elnr); const ELEMENT_FACE * elfaces = MeshTopology::GetFaces0 (el.GetType()); int j = 0; if (elfaces[j][3] < 0) { // triangle INDEX_4 face(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]], 0); int facedir = 0; if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 1; } if (face.I2() > face.I3()) { swap (face.I2(), face.I3()); facedir += 2; } if (face.I1() > face.I2()) { swap (face.I1(), face.I2()); facedir += 4; } return facedir; } else { // quad // int facenum; INDEX_4 face4(el[elfaces[j][0]], el[elfaces[j][1]], el[elfaces[j][2]], el[elfaces[j][3]]); int facedir = 0; if (min2 (face4.I1(), face4.I2()) > min2 (face4.I4(), face4.I3())) { // z - flip facedir += 1; swap (face4.I1(), face4.I4()); swap (face4.I2(), face4.I3()); } if (min2 (face4.I1(), face4.I4()) > min2 (face4.I2(), face4.I3())) { // x - flip facedir += 2; swap (face4.I1(), face4.I2()); swap (face4.I3(), face4.I4()); } if (face4.I2() > face4.I4()) { // diagonal flip facedir += 4; swap (face4.I2(), face4.I4()); } return facedir; } } int MeshTopology :: GetSegmentEdgeOrientation (int elnr) const { const Segment & el = mesh->LineSegment (elnr); const ELEMENT_EDGE * eledges = MeshTopology::GetEdges0 (el.GetType()); int k = 0; INDEX_2 edge(el[eledges[k][0]], el[eledges[k][1]]); int edgedir = (edge.I1() > edge.I2()); return edgedir; } void MeshTopology :: GetFaceVertices (int fnr, NgArray & vertices) const { vertices.SetSize(4); for (int i = 0; i < 4; i++) vertices[i] = face2vert.Get(fnr)[i]; if (vertices[3] == 0) vertices.SetSize(3); } void MeshTopology :: GetFaceVertices (int fnr, int * vertices) const { for (int i = 0; i <= 3; i++) vertices[i] = face2vert.Get(fnr)[i]; } void MeshTopology :: GetEdgeVertices (int ednr, int & v1, int & v2) const { // cout << "id = " << id << "getedgevertices, ednr = " << ednr << ", ned = " << edge2vert.Size() << "&v1 = " << &v1 << endl; if (ednr < 1 || ednr > edge2vert.Size()) cerr << "illegal edge nr: " << ednr << ", numedges = " << edge2vert.Size() << " id = " << id << endl; v1 = edge2vert.Get(ednr)[0]; v2 = edge2vert.Get(ednr)[1]; } void MeshTopology :: GetEdgeVertices (int ednr, PointIndex & v1, PointIndex & v2) const { v1 = edge2vert.Get(ednr)[0]; v2 = edge2vert.Get(ednr)[1]; } void MeshTopology :: GetFaceEdges (int fnr, NgArray & fedges, bool withorientation) const { NgArrayMem pi(4); NgArrayMem eledges; fedges.SetSize (0); GetFaceVertices(fnr, pi); // Sort Edges according to global vertex numbers // e1 = fmax, f2 // e2 = fmax, f1 // e3 = op e1(f2,f3) // e4 = op e2(f1,f3) /* NgArrayMem fp; fp[0] = pi[0]; for(int k=1;kfp[0]) swap(fp[k],fp[0]); fp[1] = fp[0]+ */ // GetVertexElements (pi[0], els); NgFlatArray els = GetVertexElements (pi[0]); // find one element having all vertices of the face for (int i = 0; i < els.Size(); i++) { const Element & el = (*mesh)[els[i]]; int nref_faces = GetNFaces (el.GetType()); const ELEMENT_FACE * ref_faces = GetFaces1 (el.GetType()); int nfa_ref_edges = GetNEdges (GetFaceType(fnr)); int cntv = 0,fa=-1; for(int m=0;m0;j++) for(int k=0;k=0) { const ELEMENT_EDGE * fa_ref_edges = GetEdges1 (GetFaceType(fnr)); fedges.SetSize(nfa_ref_edges); GetElementEdges (els[i]+1, eledges); for (int j = 0; j < eledges.Size(); j++) { int vi1, vi2; GetEdgeVertices (eledges[j], vi1, vi2); bool has1 = 0; bool has2 = 0; for (int k = 0; k < pi.Size(); k++) { if (vi1 == pi[k]) has1 = 1; if (vi2 == pi[k]) has2 = 1; } if (has1 && has2) // eledges[j] is on face { // fedges.Append (eledges[j]); for(int k=0;k & elements) const { if (vert2element.Size()) { int ne = vert2element.EntrySize(vnr); elements.SetSize(ne); for (int i = 1; i <= ne; i++) elements.Elem(i) = vert2element.Get(vnr, i); } } /* NgFlatArray MeshTopology :: GetVertexElements (int vnr) const { if (vert2element) return (*vert2element)[vnr]; return NgFlatArray (0,0); } NgFlatArray MeshTopology :: GetVertexSurfaceElements (int vnr) const { if (vert2surfelement) return (*vert2surfelement)[vnr]; return NgFlatArray (0,0); } NgFlatArray MeshTopology :: GetVertexSegments (int vnr) const { if (vert2segment) return (*vert2segment)[vnr]; return NgFlatArray (0,0); } */ void MeshTopology :: GetVertexSurfaceElements( int vnr, NgArray & elements ) const { if (vert2surfelement.Size()) { int i; int ne = vert2surfelement.EntrySize(vnr); elements.SetSize(ne); for (i = 1; i <= ne; i++) elements.Elem(i) = vert2surfelement.Get(vnr, i); } } int MeshTopology :: GetVerticesEdge ( int v1, int v2 ) const { NgArray elements_v1; NgArray elementedges; GetVertexElements ( v1, elements_v1); int edv1, edv2; for ( int i = 0; i < elements_v1.Size(); i++ ) { GetElementEdges( elements_v1[i]+1, elementedges ); for ( int ed = 0; ed < elementedges.Size(); ed ++) { GetEdgeVertices( elementedges[ed], edv1, edv2 ); if ( ( edv1 == v1 && edv2 == v2 ) || ( edv1 == v2 && edv2 == v1 ) ) return elementedges[ed]; } } return -1; } void MeshTopology :: GetSegmentVolumeElements ( int segnr, NgArray & volels ) const { int v1, v2; GetEdgeVertices ( GetSegmentEdge (segnr), v1, v2 ); NgArray volels1, volels2; GetVertexElements ( v1, volels1 ); GetVertexElements ( v2, volels2 ); volels.SetSize(0); for ( int eli1=1; eli1 <= volels1.Size(); eli1++) if ( volels2.Contains( volels1.Elem(eli1) ) ) volels.Append ( volels1.Elem(eli1) ); } void MeshTopology :: GetSegmentSurfaceElements (int segnr, NgArray & els) const { int v1, v2; GetEdgeVertices ( GetSegmentEdge (segnr), v1, v2 ); NgArray els1, els2; GetVertexSurfaceElements ( v1, els1 ); GetVertexSurfaceElements ( v2, els2 ); els.SetSize(0); for ( int eli1=1; eli1 <= els1.Size(); eli1++) if ( els2.Contains( els1.Elem(eli1) ) ) els.Append ( els1.Elem(eli1) ); } }