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999 lines
30 KiB
C++
999 lines
30 KiB
C++
#ifndef MESHCLASS
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#define MESHCLASS
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/**************************************************************************/
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/* File: meshclass.hpp */
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/* Author: Joachim Schoeberl */
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/* Date: 20. Nov. 99 */
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/**************************************************************************/
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/*
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The mesh class
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*/
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#include<filesystem>
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namespace netgen
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{
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using namespace std;
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static constexpr int MPI_TAG_MESH = 210;
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enum resthtype { RESTRICTH_FACE, RESTRICTH_EDGE,
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RESTRICTH_SURFACEELEMENT, RESTRICTH_POINT, RESTRICTH_SEGMENT };
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class HPRefElement;
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class CurvedElements;
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class AnisotropicClusters;
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class ParallelMeshTopology;
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/// 2d/3d mesh
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class Mesh
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{
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public:
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// typedef Array<MeshPoint, PointIndex> T_POINTS;
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typedef netgen::T_POINTS T_POINTS;
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private:
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/// point coordinates
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T_POINTS points;
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// The communicator for this mesh. Just a dummy if compiled without MPI.
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NgMPI_Comm comm;
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/// line-segments at edges
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Array<Segment, SegmentIndex> segments;
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/// surface elements, 2d-inner elements
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Array<Element2d, SurfaceElementIndex> surfelements;
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/// volume elements
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Array<Element, ElementIndex> volelements;
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/// points will be fixed forever
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Array<PointIndex> lockedpoints;
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/// surface indices at boundary nodes
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// TABLE<int,PointIndex::BASE> surfacesonnode;
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/// boundary edges (1..normal bedge, 2..segment)
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unique_ptr<INDEX_2_CLOSED_HASHTABLE<int>> boundaryedges;
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///
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unique_ptr<INDEX_2_CLOSED_HASHTABLE<int>> segmentht;
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///
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unique_ptr<INDEX_3_CLOSED_HASHTABLE<int>> surfelementht;
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unique_ptr<INDEX_3_CLOSED_HASHTABLE<int>> illegal_trigs;
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/// faces of rest-solid
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NgArray<Element2d> openelements;
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/// open segments for surface meshing
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NgArray<Segment> opensegments;
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Array<int> tets_in_qualclass;
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/**
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Representation of local mesh-size h (one function per mesh layer)
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*/
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Array<shared_ptr<LocalH>> lochfunc;
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///
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double hglob;
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///
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double hmin;
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///
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NgArray<double> maxhdomain;
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/**
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the face-index of the surface element maps into
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this table.
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*/
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Array<FaceDescriptor> facedecoding;
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/**
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the edge-index of the line element maps into
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this table.
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*/
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NgArray<EdgeDescriptor> edgedecoding;
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/// sub-domain materials
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NgArray<string*> materials;
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/// labels for boundary conditions
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NgArray<string*> bcnames;
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/// labels for co dim 2 bboundary conditions
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NgArray<string*> cd2names;
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/// labels for co dim 3 bbboundary conditions
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NgArray<string*> cd3names;
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/// Periodic surface, close surface, etc. identifications
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unique_ptr<Identifications> ident;
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/// number of vertices (if < 0, use np)
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int numvertices;
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/// geometric search tree for interval intersection search
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unique_ptr<BoxTree<3>> elementsearchtree;
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/// time stamp for tree
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mutable int elementsearchtreets;
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/// element -> face, element -> edge etc ...
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MeshTopology topology;
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/// methods for high order elements
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unique_ptr<CurvedElements> curvedelems;
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/// nodes identified by close points
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unique_ptr<AnisotropicClusters> clusters;
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/// space dimension (2 or 3)
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int dimension;
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/// changed by every minor modification (addpoint, ...)
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int timestamp;
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/// changed after finishing global algorithm (improve, ...)
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int majortimestamp;
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/// mesh access semaphores.
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NgMutex mutex;
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/// mesh access semaphores.
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NgMutex majormutex;
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SymbolTable< NgArray<int>* > userdata_int;
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SymbolTable< NgArray<double>* > userdata_double;
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mutable NgArray< Point3d > pointcurves;
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mutable NgArray<int> pointcurves_startpoint;
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mutable NgArray<double> pointcurves_red,pointcurves_green,pointcurves_blue;
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/// start element for point search (GetElementOfPoint)
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mutable int ps_startelement;
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#ifdef PARALLEL
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/// connection to parallel meshes
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unique_ptr<ParallelMeshTopology> paralleltop;
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#endif
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shared_ptr<NetgenGeometry> geometry;
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public:
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DLL_HEADER void BuildBoundaryEdges(bool rebuild=true);
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DLL_HEADER bool PointContainedIn2DElement(const Point3d & p,
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double lami[3],
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const int element,
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bool consider3D = false) const;
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DLL_HEADER bool PointContainedIn3DElement(const Point3d & p,
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double lami[3],
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const int element) const;
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DLL_HEADER bool PointContainedIn3DElementOld(const Point3d & p,
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double lami[3],
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const int element) const;
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public:
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Signal<> updateSignal;
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// store coarse mesh before hp-refinement
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unique_ptr<NgArray<HPRefElement>> hpelements;
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unique_ptr<Mesh> coarsemesh;
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/// number of refinement levels
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// int mglevels;
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// number of vertices on each refinement level:
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NgArray<size_t> level_nv;
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/// refinement hierarchy
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NgArray<PointIndices<2>,PointIndex::BASE> mlbetweennodes;
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/// parent element of volume element
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NgArray<int> mlparentelement;
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/// parent element of surface element
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NgArray<int> mlparentsurfaceelement;
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///
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DLL_HEADER Mesh();
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///
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DLL_HEADER ~Mesh();
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Mesh & operator= (const Mesh & mesh2);
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///
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DLL_HEADER void DeleteMesh();
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///
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void ClearSurfaceElements();
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///
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DLL_HEADER void ClearVolumeElements()
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{
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volelements.SetSize(0);
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timestamp = NextTimeStamp();
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}
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///
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DLL_HEADER void ClearSegments()
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{
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segments.SetSize(0);
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timestamp = NextTimeStamp();
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}
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///
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bool TestOk () const;
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void SetAllocSize(int nnodes, int nsegs, int nsel, int nel);
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DLL_HEADER PointIndex AddPoint (const Point3d & p, int layer = 1);
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DLL_HEADER PointIndex AddPoint (const Point3d & p, int layer, POINTTYPE type);
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auto GetNP () const { return points.Size(); }
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// [[deprecated("Use Point(PointIndex) instead of int !")]]
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MeshPoint & Point(int i)
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{
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// return points.Elem(i);
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return Point (PointIndex(i+PointIndex::BASE-1));
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}
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MeshPoint & Point(PointIndex pi) { return points[pi]; }
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// [[deprecated("Use Point(PointIndex) instead of int !")]]
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const MeshPoint & Point(int i) const
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{
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// return points.Get(i);
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return Point (PointIndex(i+PointIndex::BASE-1));
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}
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const MeshPoint & Point(PointIndex pi) const { return points[pi]; }
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const MeshPoint & operator[] (PointIndex pi) const { return points[pi]; }
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MeshPoint & operator[] (PointIndex pi) { return points[pi]; }
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const T_POINTS & Points() const { return points; }
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T_POINTS & Points() { return points; }
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DLL_HEADER SegmentIndex AddSegment (const Segment & s);
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void DeleteSegment (int segnr)
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{
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segments[segnr-1][0].Invalidate();
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segments[segnr-1][1].Invalidate();
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}
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/*
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void FullDeleteSegment (int segnr) // von wem ist das ???
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{
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segments.Delete(segnr-PointIndex::BASE);
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}
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*/
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int GetNSeg () const { return segments.Size(); }
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// [[deprecated("Use LineSegment(SegmentIndex) instead of int !")]]
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Segment & LineSegment(int i) { return segments[i-1]; }
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// [[deprecated("Use LineSegment(SegmentIndex) instead of int !")]]
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const Segment & LineSegment(int i) const { return segments[i-1]; }
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Segment & LineSegment(SegmentIndex si) { return segments[si]; }
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const Segment & LineSegment(SegmentIndex si) const { return segments[si]; }
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const Segment & operator[] (SegmentIndex si) const { return segments[si]; }
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Segment & operator[] (SegmentIndex si) { return segments[si]; }
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const auto & LineSegments() const { return segments; }
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auto & LineSegments() { return segments; }
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Array<Element0d> pointelements; // only via python interface
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DLL_HEADER SurfaceElementIndex AddSurfaceElement (const Element2d & el);
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// write to pre-allocated container, thread-safe
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DLL_HEADER void SetSurfaceElement (SurfaceElementIndex sei, const Element2d & el);
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[[deprecated("Use Delete(SurfaceElementIndex) instead of int !")]]
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void DeleteSurfaceElement (int eli)
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{
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/*
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surfelements.Elem(eli).Delete();
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surfelements.Elem(eli).PNum(1).Invalidate();
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surfelements.Elem(eli).PNum(2).Invalidate();
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surfelements.Elem(eli).PNum(3).Invalidate();
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*/
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surfelements[eli-1].Delete();
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/*
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surfelements[eli-1].PNum(1).Invalidate();
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surfelements[eli-1].PNum(2).Invalidate();
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surfelements[eli-1].PNum(3).Invalidate();
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*/
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timestamp = NextTimeStamp();
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}
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[[deprecated("Use Delete(SurfaceElementIndex) instead !")]]
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void DeleteSurfaceElement (SurfaceElementIndex eli)
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{
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// for (auto & p : surfelements[eli].PNums()) p.Invalidate();
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surfelements[eli].Delete();
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timestamp = NextTimeStamp();
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}
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void Delete (SurfaceElementIndex eli)
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{
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// for (auto & p : surfelements[eli].PNums()) p.Invalidate();
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surfelements[eli].Delete();
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timestamp = NextTimeStamp();
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}
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auto GetNSE () const { return surfelements.Size(); }
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// [[deprecated("Use SurfaceElement(SurfaceElementIndex) instead of int !")]]
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Element2d & SurfaceElement(int i) { return surfelements[i-1]; }
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// [[deprecated("Use SurfaceElement(SurfaceElementIndex) instead of int !")]]
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const Element2d & SurfaceElement(int i) const { return surfelements[i-1]; }
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// [[deprecated("Use mesh[](SurfaceElementIndex) instead !")]]
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Element2d & SurfaceElement(SurfaceElementIndex i) { return surfelements[i]; }
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// [[deprecated("Use mesh[](SurfaceElementIndex) instead !")]]
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const Element2d & SurfaceElement(SurfaceElementIndex i) const { return surfelements[i]; }
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const Element2d & operator[] (SurfaceElementIndex ei) const
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{ return surfelements[ei]; }
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Element2d & operator[] (SurfaceElementIndex ei)
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{ return surfelements[ei]; }
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const auto & SurfaceElements() const { return surfelements; }
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auto & SurfaceElements() { return surfelements; }
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DLL_HEADER void RebuildSurfaceElementLists ();
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DLL_HEADER void GetSurfaceElementsOfFace (int facenr, Array<SurfaceElementIndex> & sei) const;
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DLL_HEADER ElementIndex AddVolumeElement (const Element & el);
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// write to pre-allocated container, thread-safe
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DLL_HEADER void SetVolumeElement (ElementIndex sei, const Element & el);
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auto GetNE () const { return volelements.Size(); }
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// [[deprecated("Use VolumeElement(ElementIndex) instead of int !")]]
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Element & VolumeElement(int i) { return volelements[i-1]; }
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// [[deprecated("Use VolumeElement(ElementIndex) instead of int !")]]
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const Element & VolumeElement(int i) const { return volelements[i-1]; }
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// [[deprecated("Use mesh[](VolumeElementIndex) instead !")]]
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Element & VolumeElement(ElementIndex i) { return volelements[i]; }
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// [[deprecated("Use mesh[](VolumeElementIndex) instead !")]]
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const Element & VolumeElement(ElementIndex i) const { return volelements[i]; }
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const Element & operator[] (ElementIndex ei) const { return volelements[ei]; }
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Element & operator[] (ElementIndex ei) { return volelements[ei]; }
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ELEMENTTYPE ElementType (ElementIndex i) const
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{ return (volelements[i].flags.fixed) ? FIXEDELEMENT : FREEELEMENT; }
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const auto & VolumeElements() const { return volelements; }
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auto & VolumeElements() { return volelements; }
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///
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DLL_HEADER double ElementError (int eli, const MeshingParameters & mp) const;
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///
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DLL_HEADER void AddLockedPoint (PointIndex pi);
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///
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void ClearLockedPoints ();
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const auto & LockedPoints() const { return lockedpoints; }
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/// Returns number of domains
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DLL_HEADER int GetNDomains() const;
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///
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int GetDimension() const { return dimension; }
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DLL_HEADER void SetDimension (int dim); // { dimension = dim; }
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/// sets internal tables
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DLL_HEADER void CalcSurfacesOfNode ();
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/// additional (temporarily) fix points
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void FixPoints (const NgBitArray & fixpoints);
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/**
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finds elements without neighbour and
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boundary elements without inner element.
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Results are stored in openelements.
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if dom == 0, all sub-domains, else subdomain dom */
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DLL_HEADER void FindOpenElements (int dom = 0);
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/**
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finds segments without surface element,
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and surface elements without neighbours.
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store in opensegmentsy
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*/
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DLL_HEADER void FindOpenSegments (int surfnr = 0);
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/**
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remove one layer of surface elements
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*/
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DLL_HEADER void RemoveOneLayerSurfaceElements ();
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int GetNOpenSegments () { return opensegments.Size(); }
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const Segment & GetOpenSegment (int nr) { return opensegments.Get(nr); }
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/**
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Checks overlap of boundary
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return == 1, iff overlap
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*/
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DLL_HEADER int CheckOverlappingBoundary ();
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/**
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Checks consistent boundary
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return == 0, everything ok
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*/
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DLL_HEADER int CheckConsistentBoundary () const;
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/*
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checks element orientation
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*/
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DLL_HEADER int CheckVolumeMesh () const;
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/**
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finds average h of surface surfnr if surfnr > 0,
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else of all surfaces.
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*/
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DLL_HEADER double AverageH (int surfnr = 0) const;
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/// Calculates localh
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DLL_HEADER void CalcLocalH (double grading, int layer=1);
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///
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DLL_HEADER void SetLocalH (netgen::Point<3> pmin, netgen::Point<3> pmax, double grading, int layer=1);
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///
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DLL_HEADER void RestrictLocalH (const Point3d & p, double hloc, int layer=1);
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///
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DLL_HEADER void RestrictLocalHLine (const Point3d & p1, const Point3d & p2,
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double hloc, int layer=1);
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/// number of elements per radius
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DLL_HEADER void CalcLocalHFromSurfaceCurvature(double grading, double elperr, int layer=1);
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///
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DLL_HEADER void CalcLocalHFromPointDistances(double grading, int layer=1);
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///
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DLL_HEADER void RestrictLocalH (resthtype rht, int nr, double loch);
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///
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DLL_HEADER void LoadLocalMeshSize (const filesystem::path & meshsizefilename);
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///
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DLL_HEADER void SetGlobalH (double h);
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///
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DLL_HEADER void SetMinimalH (double h);
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///
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DLL_HEADER double MaxHDomain (int dom) const;
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///
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DLL_HEADER void SetMaxHDomain (const NgArray<double> & mhd);
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///
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DLL_HEADER double GetH (const Point3d & p, int layer=1) const;
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DLL_HEADER double GetH (PointIndex pi) const { return GetH(points[pi], points[pi].GetLayer()); }
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///
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double GetMinH (const Point3d & pmin, const Point3d & pmax, int layer=1);
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///
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bool HasLocalHFunction (int layer=1) { return lochfunc[layer-1] != nullptr; }
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///
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LocalH & LocalHFunction (int layer=1) { return * lochfunc[layer-1]; }
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shared_ptr<LocalH> GetLocalH(int layer=1) const
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{
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if(lochfunc.Size() == 1)
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return lochfunc[0];
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return lochfunc[layer-1];
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}
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DLL_HEADER void SetLocalH(shared_ptr<LocalH> loch, int layer=1);
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///
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bool LocalHFunctionGenerated(int layer=1) const { return (lochfunc[layer-1] != NULL); }
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/// Find bounding box
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DLL_HEADER void GetBox (Point3d & pmin, Point3d & pmax, int dom = -1) const;
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/// Find bounding box of points of typ ptyp or less
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DLL_HEADER void GetBox (Point3d & pmin, Point3d & pmax, POINTTYPE ptyp ) const;
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///
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int GetNOpenElements() const
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{ return openelements.Size(); }
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///
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const Element2d & OpenElement(int i) const
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{ return openelements.Get(i); }
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auto & OpenElements() const { return openelements; }
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auto & OpenElements() { return openelements; }
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/// are also quads open elements
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bool HasOpenQuads () const;
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/// split into connected pieces
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DLL_HEADER void SplitIntoParts ();
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///
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DLL_HEADER void SplitSeparatedFaces ();
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/// Refines mesh and projects points to true surface
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// void Refine (int levels, const CSGeometry * geom);
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void ZRefine(const string& name, const Array<double>& slices);
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bool BoundaryEdge (PointIndex pi1, PointIndex pi2) const
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{
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if(!boundaryedges)
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const_cast<Mesh *>(this)->BuildBoundaryEdges();
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INDEX_2 i2 (pi1, pi2);
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i2.Sort();
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return boundaryedges->Used (i2);
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}
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void DeleteBoundaryEdges ()
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{
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boundaryedges = nullptr;
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}
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bool IsSegment (PointIndex pi1, PointIndex pi2) const
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{
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INDEX_2 i2 (pi1, pi2);
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i2.Sort();
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return segmentht->Used (i2);
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}
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SegmentIndex SegmentNr (PointIndex pi1, PointIndex pi2) const
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{
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INDEX_2 i2 (pi1, pi2);
|
|
i2.Sort();
|
|
return segmentht->Get (i2);
|
|
}
|
|
|
|
|
|
/**
|
|
Remove unused points. etc.
|
|
*/
|
|
DLL_HEADER void Compress ();
|
|
|
|
/// first vertex has lowest index
|
|
void OrderElements();
|
|
|
|
///
|
|
DLL_HEADER void Save (ostream & outfile) const;
|
|
///
|
|
DLL_HEADER void Load (istream & infile);
|
|
///
|
|
DLL_HEADER void Merge (istream & infile, const int surfindex_offset = 0);
|
|
///
|
|
DLL_HEADER void Save (const filesystem::path & filename) const;
|
|
///
|
|
DLL_HEADER void Load (const filesystem::path & filename);
|
|
///
|
|
DLL_HEADER void Merge (const filesystem::path & filename, const int surfindex_offset = 0);
|
|
|
|
|
|
DLL_HEADER void DoArchive (Archive & archive);
|
|
///
|
|
DLL_HEADER void ImproveMesh (const MeshingParameters & mp, OPTIMIZEGOAL goal = OPT_QUALITY);
|
|
|
|
///
|
|
void ImproveMeshJacobian (const MeshingParameters & mp, OPTIMIZEGOAL goal = OPT_QUALITY, const NgBitArray * usepoint = NULL);
|
|
///
|
|
void ImproveMeshJacobianOnSurface (const MeshingParameters & mp,
|
|
const NgBitArray & usepoint,
|
|
const NgArray< Vec<3>* > & nv,
|
|
OPTIMIZEGOAL goal = OPT_QUALITY,
|
|
const NgArray< NgArray<int,PointIndex::BASE>* > * idmaps = NULL);
|
|
/**
|
|
free nodes in environment of openelements
|
|
for optimiztion
|
|
*/
|
|
void FreeOpenElementsEnvironment (int layers);
|
|
|
|
|
|
DLL_HEADER double CalcTotalBad (const MeshingParameters & mp);
|
|
FlatArray<int> GetQualityHistogram() { return tets_in_qualclass; }
|
|
|
|
///
|
|
bool LegalTet (Element & el) const
|
|
{
|
|
if (el.IllegalValid())
|
|
return !el.Illegal();
|
|
return LegalTet2 (el);
|
|
}
|
|
///
|
|
bool LegalTet2 (Element & el) const;
|
|
|
|
|
|
///
|
|
// Find trigs with same vertices
|
|
// return: number of illegal trigs
|
|
int FindIllegalTrigs ();
|
|
|
|
bool LegalTrig (const Element2d & el) const;
|
|
/**
|
|
if values non-null, return values in 4-double array:
|
|
triangle angles min/max, tetangles min/max
|
|
if null, output results on cout
|
|
*/
|
|
DLL_HEADER void CalcMinMaxAngle (double badellimit, double * retvalues = NULL);
|
|
|
|
/*
|
|
Marks elements which are dangerous to refine
|
|
return: number of illegal elements
|
|
*/
|
|
DLL_HEADER int MarkIllegalElements ();
|
|
|
|
/// orient surface mesh, for one sub-domain only
|
|
DLL_HEADER void SurfaceMeshOrientation ();
|
|
|
|
/// convert mixed element mesh to tet-mesh
|
|
DLL_HEADER void Split2Tets();
|
|
|
|
|
|
/// build box-search tree
|
|
DLL_HEADER void BuildElementSearchTree ();
|
|
|
|
void SetPointSearchStartElement(const int el) const {ps_startelement = el;}
|
|
|
|
/// gives element of point, barycentric coordinates
|
|
DLL_HEADER int GetElementOfPoint (const netgen::Point<3> & p,
|
|
double * lami,
|
|
bool build_searchtree = 0,
|
|
const int index = -1,
|
|
const bool allowindex = true) const;
|
|
DLL_HEADER int GetElementOfPoint (const netgen::Point<3> & p,
|
|
double * lami,
|
|
const NgArray<int> * const indices,
|
|
bool build_searchtree = 0,
|
|
const bool allowindex = true) const;
|
|
DLL_HEADER int GetSurfaceElementOfPoint (const netgen::Point<3> & p,
|
|
double * lami,
|
|
bool build_searchtree = 0,
|
|
const int index = -1,
|
|
const bool allowindex = true) const;
|
|
DLL_HEADER int GetSurfaceElementOfPoint (const netgen::Point<3> & p,
|
|
double * lami,
|
|
const NgArray<int> * const indices,
|
|
bool build_searchtree = 0,
|
|
const bool allowindex = true) const;
|
|
|
|
/// give list of vol elements which are int the box(p1,p2)
|
|
void GetIntersectingVolEls(const Point3d& p1, const Point3d& p2,
|
|
NgArray<int> & locels) const;
|
|
|
|
///
|
|
int AddFaceDescriptor(const FaceDescriptor& fd)
|
|
{ facedecoding.Append(fd); return facedecoding.Size(); }
|
|
|
|
int AddEdgeDescriptor(const EdgeDescriptor & fd)
|
|
{ edgedecoding.Append(fd); return edgedecoding.Size() - 1; }
|
|
|
|
auto & GetCommunicator() const { return this->comm; }
|
|
void SetCommunicator(NgMPI_Comm acomm);
|
|
|
|
///
|
|
DLL_HEADER void SetMaterial (int domnr, const string & mat);
|
|
///
|
|
DLL_HEADER const string & GetMaterial (int domnr) const;
|
|
DLL_HEADER static string defaultmat;
|
|
const string * GetMaterialPtr (int domnr) const // 1-based
|
|
{
|
|
return domnr <= materials.Size() ? materials.Get(domnr) : &defaultmat;
|
|
}
|
|
|
|
DLL_HEADER void SetNBCNames ( int nbcn );
|
|
|
|
DLL_HEADER void SetBCName ( int bcnr, const string & abcname );
|
|
|
|
DLL_HEADER const string & GetBCName ( int bcnr ) const;
|
|
|
|
DLL_HEADER void SetNCD2Names (int ncd2n);
|
|
DLL_HEADER void SetCD2Name (int cd2nr, const string & abcname);
|
|
|
|
DLL_HEADER const string & GetCD2Name (int cd2nr ) const;
|
|
DLL_HEADER static string cd2_default_name;
|
|
string * GetCD2NamePtr (int cd2nr ) const
|
|
{
|
|
if (cd2nr < cd2names.Size() && cd2names[cd2nr]) return cd2names[cd2nr];
|
|
return &cd2_default_name;
|
|
}
|
|
size_t GetNCD2Names() const { return cd2names.Size(); }
|
|
|
|
DLL_HEADER void SetNCD3Names (int ncd3n);
|
|
DLL_HEADER void SetCD3Name (int cd3nr, const string & abcname);
|
|
DLL_HEADER int AddCD3Name (const string & aname);
|
|
|
|
DLL_HEADER const string & GetCD3Name (int cd3nr ) const;
|
|
DLL_HEADER static string cd3_default_name;
|
|
string * GetCD3NamePtr (int cd3nr ) const
|
|
{
|
|
if (cd3nr < cd3names.Size() && cd3names[cd3nr]) return cd3names[cd3nr];
|
|
return &cd3_default_name;
|
|
}
|
|
size_t GetNCD3Names() const { return cd3names.Size(); }
|
|
|
|
DLL_HEADER static string default_bc;
|
|
string * GetBCNamePtr (int bcnr) const
|
|
{ return (bcnr < bcnames.Size() && bcnames[bcnr]) ? bcnames[bcnr] : &default_bc; }
|
|
|
|
|
|
NgArray<string*> & GetRegionNamesCD (int codim);
|
|
|
|
///
|
|
void ClearFaceDescriptors()
|
|
{ facedecoding.SetSize(0); }
|
|
|
|
///
|
|
int GetNFD () const
|
|
{ return facedecoding.Size(); }
|
|
|
|
const FaceDescriptor & GetFaceDescriptor (const Element2d & el) const
|
|
{ return facedecoding[el.GetIndex()-1]; }
|
|
|
|
const FaceDescriptor & GetFaceDescriptor (int i) const
|
|
{ return facedecoding[i-1]; }
|
|
// { return facedecoding.Get(i); }
|
|
|
|
auto & FaceDescriptors () const { return facedecoding; }
|
|
|
|
const EdgeDescriptor & GetEdgeDescriptor (int i) const
|
|
{ return edgedecoding[i]; }
|
|
|
|
|
|
///
|
|
FaceDescriptor & GetFaceDescriptor (int i)
|
|
{ return facedecoding[i-1]; }
|
|
// { return facedecoding.Elem(i); }
|
|
|
|
int IdentifyPeriodicBoundaries(const string& s1,
|
|
const string& s2,
|
|
const Transformation<3>& mapping,
|
|
double pointTolerance);
|
|
|
|
// #ifdef NONE
|
|
// /*
|
|
// Identify points pi1 and pi2, due to
|
|
// identification nr identnr
|
|
// */
|
|
// void AddIdentification (int pi1, int pi2, int identnr);
|
|
|
|
// int GetIdentification (int pi1, int pi2) const;
|
|
// int GetIdentificationSym (int pi1, int pi2) const;
|
|
// ///
|
|
// INDEX_2_HASHTABLE<int> & GetIdentifiedPoints ()
|
|
// {
|
|
// return *identifiedpoints;
|
|
// }
|
|
|
|
// ///
|
|
// void GetIdentificationMap (int identnr, NgArray<int> & identmap) const;
|
|
// ///
|
|
// void GetIdentificationPairs (int identnr, NgArray<INDEX_2> & identpairs) const;
|
|
// ///
|
|
// int GetMaxIdentificationNr () const
|
|
// {
|
|
// return maxidentnr;
|
|
// }
|
|
// #endif
|
|
|
|
/// return periodic, close surface etc. identifications
|
|
Identifications & GetIdentifications () { return *ident; }
|
|
/// return periodic, close surface etc. identifications
|
|
const Identifications & GetIdentifications () const { return *ident; }
|
|
///
|
|
bool HasIdentifications() const { return ident != nullptr; }
|
|
|
|
DLL_HEADER void InitPointCurve(double red = 1, double green = 0, double blue = 0) const;
|
|
DLL_HEADER void AddPointCurvePoint(const Point3d & pt) const;
|
|
DLL_HEADER int GetNumPointCurves(void) const;
|
|
DLL_HEADER int GetNumPointsOfPointCurve(int curve) const;
|
|
DLL_HEADER Point3d & GetPointCurvePoint(int curve, int n) const;
|
|
DLL_HEADER void GetPointCurveColor(int curve, double & red, double & green, double & blue) const;
|
|
|
|
|
|
|
|
|
|
/// find number of vertices
|
|
DLL_HEADER void ComputeNVertices ();
|
|
/// number of vertices (no edge-midpoints)
|
|
DLL_HEADER int GetNV () const;
|
|
/// remove edge points
|
|
DLL_HEADER void SetNP (int np);
|
|
|
|
|
|
|
|
DLL_HEADER Table<ElementIndex, PointIndex> CreatePoint2ElementTable(std::optional<BitArray> points = std::nullopt) const;
|
|
DLL_HEADER Table<SurfaceElementIndex, PointIndex> CreatePoint2SurfaceElementTable( int faceindex=0 ) const;
|
|
|
|
DLL_HEADER bool PureTrigMesh (int faceindex = 0) const;
|
|
DLL_HEADER bool PureTetMesh () const;
|
|
|
|
|
|
const MeshTopology & GetTopology () const { return topology; }
|
|
MeshTopology & GetTopology () { return topology; }
|
|
|
|
DLL_HEADER void UpdateTopology (NgTaskManager tm = &DummyTaskManager,
|
|
NgTracer tracer = &DummyTracer);
|
|
|
|
class CurvedElements & GetCurvedElements () const
|
|
{ return *curvedelems; }
|
|
|
|
DLL_HEADER void BuildCurvedElements (const class Refinement * ref, int aorder, bool arational = false);
|
|
DLL_HEADER void BuildCurvedElements (int aorder);
|
|
|
|
const class AnisotropicClusters & GetClusters () const
|
|
{ return *clusters; }
|
|
|
|
|
|
class CSurfaceArea
|
|
{
|
|
const Mesh & mesh;
|
|
bool valid;
|
|
double area;
|
|
public:
|
|
CSurfaceArea (const Mesh & amesh)
|
|
: mesh(amesh), valid(false), area(0.) { ; }
|
|
|
|
void Add (const Element2d & sel)
|
|
{
|
|
if (sel.GetNP() == 3)
|
|
area += Cross ( mesh[sel[1]]-mesh[sel[0]],
|
|
mesh[sel[2]]-mesh[sel[0]] ).Length() / 2;
|
|
else
|
|
area += Cross (Vec3d (mesh[sel.PNum(1)], mesh[sel.PNum(3)]),
|
|
Vec3d (mesh[sel.PNum(1)], mesh[sel.PNum(4)])).Length() / 2;;
|
|
}
|
|
void ReCalc ()
|
|
{
|
|
area = 0;
|
|
/*
|
|
for (SurfaceElementIndex sei = 0; sei < mesh.GetNSE(); sei++)
|
|
Add (mesh[sei]);
|
|
*/
|
|
for (const Element2d & el : mesh.SurfaceElements())
|
|
Add (el);
|
|
valid = true;
|
|
}
|
|
|
|
operator double () const { return area; }
|
|
bool Valid() const { return valid; }
|
|
};
|
|
|
|
CSurfaceArea surfarea;
|
|
CSurfaceArea & SurfaceArea() { return surfarea; }
|
|
const CSurfaceArea & SurfaceArea() const { return surfarea; }
|
|
|
|
|
|
|
|
int GetTimeStamp() const { return timestamp; }
|
|
void SetNextTimeStamp()
|
|
{ timestamp = NextTimeStamp(); }
|
|
|
|
int GetMajorTimeStamp() const { return majortimestamp; }
|
|
void SetNextMajorTimeStamp()
|
|
{ majortimestamp = timestamp = NextTimeStamp(); }
|
|
|
|
|
|
/// return mutex
|
|
NgMutex & Mutex () { return mutex; }
|
|
NgMutex & MajorMutex () { return majormutex; }
|
|
|
|
|
|
shared_ptr<NetgenGeometry> GetGeometry() const
|
|
{
|
|
static auto global_geometry = make_shared<NetgenGeometry>();
|
|
return geometry ? geometry : global_geometry;
|
|
}
|
|
void SetGeometry (shared_ptr<NetgenGeometry> geom)
|
|
{
|
|
geometry = geom;
|
|
}
|
|
|
|
///
|
|
void SetUserData(const char * id, NgArray<int> & data);
|
|
///
|
|
bool GetUserData(const char * id, NgArray<int> & data, int shift = 0) const;
|
|
///
|
|
void SetUserData(const char * id, NgArray<double> & data);
|
|
///
|
|
bool GetUserData(const char * id, NgArray<double> & data, int shift = 0) const;
|
|
|
|
///
|
|
friend void OptimizeRestart (Mesh & mesh3d);
|
|
///
|
|
void PrintMemInfo (ostream & ost) const;
|
|
///
|
|
friend class Meshing3;
|
|
|
|
// only for saving the geometry
|
|
enum GEOM_TYPE { NO_GEOM = 0, GEOM_2D = 1, GEOM_CSG = 10, GEOM_STL = 11, GEOM_OCC = 12, GEOM_ACIS = 13 };
|
|
GEOM_TYPE geomtype;
|
|
|
|
|
|
#ifdef PARALLEL
|
|
/// returns parallel topology
|
|
class ParallelMeshTopology & GetParallelTopology () const
|
|
{ return *paralleltop; }
|
|
|
|
/// distributes the master-mesh to local meshes
|
|
DLL_HEADER void Distribute ();
|
|
DLL_HEADER void Distribute (NgArray<int> & volume_weights, NgArray<int> & surface_weights,
|
|
NgArray<int> & segment_weights);
|
|
|
|
|
|
/// find connection to parallel meshes
|
|
// void FindExchangePoints () ;
|
|
|
|
// void FindExchangeEdges ();
|
|
// void FindExchangeFaces ();
|
|
|
|
/// use metis to decompose master mesh
|
|
DLL_HEADER void ParallelMetis (int nproc); // NgArray<int> & neloc );
|
|
DLL_HEADER void ParallelMetis (NgArray<int> & volume_weights, NgArray<int> & surface_weights,
|
|
NgArray<int> & segment_weights);
|
|
|
|
void PartHybridMesh (); // NgArray<int> & neloc );
|
|
void PartDualHybridMesh (); // NgArray<int> & neloc );
|
|
void PartDualHybridMesh2D (); // ( NgArray<int> & neloc );
|
|
|
|
|
|
/// send mesh from master to local procs
|
|
void SendRecvMesh ();
|
|
|
|
/// send mesh to parallel machine, keep global mesh at master
|
|
void SendMesh ( ) const; // Mesh * mastermesh, NgArray<int> & neloc) const;
|
|
/// loads a mesh sent from master processor
|
|
void ReceiveParallelMesh ();
|
|
|
|
|
|
#else
|
|
void ParallelMetis (int /* nproc */) {}
|
|
void Distribute () {}
|
|
void SendRecvMesh () {}
|
|
void Distribute (NgArray<int> & volume_weights, NgArray<int> & surface_weights,
|
|
NgArray<int> & segment_weights){ }
|
|
#endif
|
|
|
|
NgArray<int> vol_partition;
|
|
NgArray<int> surf_partition;
|
|
NgArray<int> seg_partition;
|
|
|
|
shared_ptr<Mesh> Mirror( netgen::Point<3> p, Vec<3> n );
|
|
|
|
private:
|
|
MemoryTracer mem_tracer = {"Mesh",
|
|
points, "points",
|
|
segments, "segments",
|
|
surfelements, "surfelements",
|
|
volelements, "volelements"
|
|
};
|
|
public:
|
|
const MemoryTracer & GetMemoryTracer() { return mem_tracer; }
|
|
};
|
|
|
|
inline ostream& operator<<(ostream& ost, const Mesh& mesh)
|
|
{
|
|
ost << "mesh: " << endl;
|
|
mesh.Save(ost);
|
|
return ost;
|
|
}
|
|
|
|
|
|
|
|
FlatArray<T_EDGE> MeshTopology :: GetEdges (SurfaceElementIndex elnr) const
|
|
{
|
|
return FlatArray<T_EDGE>(GetNEdges ( (*mesh)[elnr].GetType()), &surfedges[elnr][0]);
|
|
}
|
|
|
|
FlatArray<T_EDGE> MeshTopology :: GetEdges (ElementIndex elnr) const
|
|
{
|
|
return FlatArray<T_EDGE>(GetNEdges ( (*mesh)[elnr].GetType()), &edges[elnr][0]);
|
|
}
|
|
|
|
FlatArray<T_FACE> MeshTopology :: GetFaces (ElementIndex elnr) const
|
|
{
|
|
return FlatArray<T_FACE>(GetNFaces ( (*mesh)[elnr].GetType()), &faces[elnr][0]);
|
|
}
|
|
|
|
|
|
}
|
|
|
|
#endif
|
|
|
|
|