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Some improvements on Scaled Jacobian:
- add math to sphinx to generate the formulas - change the icon to deformed hexahedrons - add a test on deformed hexahedrons - update the example use case on the doc to deformed hexahedrons
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@ -186,6 +186,7 @@ html_use_index = True
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# Output file base name for HTML help builder.
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htmlhelp_basename = 'smeshdoc'
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extensions += ['sphinx.ext.mathjax']
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# Options for LaTeX output
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# ------------------------
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doc/gui/images/scaled_jacobian_mesh_hexa.png
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doc/gui/images/scaled_jacobian_mesh_hexa.png
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@ -4,12 +4,19 @@
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Scaled Jacobian
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***************
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The **Scaled Jacobian** mesh quality criteria, is a scalar measure of the deviation from the perfect element in the geometrical sense, this measure normalize the range of reported values
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between [0,1] for a normal element, the value of 1 is considered a perfect element and 0 a element with a collapsed side. Negative values are also accepted for invalid elements.
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The **Scaled Jacobian** mesh quality criteria is a scalar measure of the deviation from the perfect element in the geometrical sense. This measure normalizes the range of reported values between [0,1] for a normal element, the value of 1 is considered a perfect element and 0 a element with a collapsed side. Negative values are also accepted for invalid elements.
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The **Scaled Jacobian** is implemented for volumetric elements returning 0 for polyhedrons. For tetrahedron and hexahedron the close form
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is defined in `[1] <https://gitlab.kitware.com/third-party/verdict/-/blob/master/SAND2007-2853p.pdf>`_, for pyramids the minimum scaled jacobian of the four tetrahedrons formed
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in the four vertices of the pyramid base is reported, for pentahedrons a decomposition into tetrahedron is also done and finally for hexahedron prisms the minimum scaled jacobian between two pentahedrons and one hexahedron is reported.
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The **Scaled Jacobian** is implemented for all volumetric elements (except for polyhedrons, returning 0).
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For tetrahedrons and hexahedrons, the formulas are
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defined in `The Verdict Library Reference Manual [1] <https://gitlab.kitware.com/third-party/verdict/-/blob/master/SAND2007-2853p.pdf>`_.
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For pyramid, the minimum scaled jacobian of the four tetrahedrons formed
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in the four vertices of the pyramid base is reported.
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For pentahedron, a decomposition into tetrahedron is also done.
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For hexahedron prisms, the minimum scaled jacobian between two pentahedrons and one hexahedron is reported.
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* Geometrically the Scaled Jacobian of a **tetrahedron** can be understood by the follow figure:
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@ -35,7 +42,7 @@ in the four vertices of the pyramid base is reported, for pentahedrons a decompo
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Your mesh will be displayed in the viewer with its elements colored according to the applied mesh quality control criterion:
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.. image:: ../images/scaled_jacobian_mesh_tetra.png
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.. image:: ../images/scaled_jacobian_mesh_hexa.png
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:align: center
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@ -168,6 +168,7 @@ SET(SMESH_RESOURCES_FILES
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mesh_renumbering_nodes.png
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mesh_revolution.png
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mesh_rotation.png
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mesh_scaled_jacobian.png
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mesh_sew_bordertoside.png
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mesh_sew_conform_freeborders.png
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mesh_sew_freeborders.png
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@ -136,9 +136,47 @@ if not Done:
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pentahedrons = 0.6
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pentasAndPolys = smesh.GetFilter(SMESH.VOLUME, SMESH.FT_ScaledJacobian, SMESH.FT_LessThan, pentahedrons )
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#Distorted hexas
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polysIds = Mesh_4.GetIdsFromFilter(polysElements)
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pentasAndPolysIds = Mesh_4.GetIdsFromFilter(pentasAndPolys)
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assert( len(pentasAndPolysIds) - len(polysIds) == 10 )
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#Test distorded hexahedrons scaled jacobian values
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Mesh_5 = smesh.Mesh(Box_1,'Mesh_5')
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Regular_1D = Mesh_5.Segment()
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Number_of_Segments_1 = Regular_1D.NumberOfSegments(2)
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Quadrangle_2D = Mesh_5.Quadrangle(algo=smeshBuilder.QUADRANGLE)
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Hexa_3D = Mesh_5.Hexahedron(algo=smeshBuilder.Hexa)
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isDone = Mesh_5.Compute()
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if not Done:
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raise Exception("Error when computing hexaedrons Mesh for quality control test")
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#move some nodes to make scaled jacobian lesser than 1
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node_id_1 = Mesh_5.FindNodeClosestTo(0, 0, 10)
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node_id_5 = Mesh_5.FindNodeClosestTo(10, 0, 10)
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node_id_14 = Mesh_5.FindNodeClosestTo(10, 5, 10)
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node_id_13 = Mesh_5.FindNodeClosestTo(10, 0, 5)
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node_id_6 = Mesh_5.FindNodeClosestTo(10, 0, 0)
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Mesh_5.MoveNode( node_id_1, 1, 1, 9 )
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Mesh_5.MoveNode( node_id_5, 9, 1, 9 )
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Mesh_5.MoveNode( node_id_14, 10, 5, 9 )
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Mesh_5.MoveNode( node_id_13, 9, 0, 5 )
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Mesh_5.MoveNode( node_id_6, 8, 0, 0 )
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yellow_element = Mesh_5.FindElementsByPoint(7.5, 2.5, 2.5)[0]
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green_element = Mesh_5.FindElementsByPoint(7.5, 2.5, 7.5)[0]
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blue_element = Mesh_5.FindElementsByPoint(2.5, 2.5, 7.5)[0]
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yellow_SJ = Mesh_5.GetScaledJacobian(yellow_element)
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green_SJ = Mesh_5.GetScaledJacobian(green_element)
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blue_SJ = Mesh_5.GetScaledJacobian(blue_element)
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yellow_SJ_ref = 0.910446300912
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green_SJ_ref = 0.818025491961
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blue_SJ_ref = 0.654728501099
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assert assertWithDelta( yellow_SJ_ref, yellow_SJ, 1e-10 )
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assert assertWithDelta( green_SJ_ref, green_SJ, 1e-10 )
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assert assertWithDelta( blue_SJ_ref, blue_SJ, 1e-10 )
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