// Copyright (C) 2007-2013 CEA/DEN, EDF R&D, OPEN CASCADE // // Copyright (C) 2003-2007 OPEN CASCADE, EADS/CCR, LIP6, CEA/DEN, // CEDRAT, EDF R&D, LEG, PRINCIPIA R&D, BUREAU VERITAS // // This library is free software; you can redistribute it and/or // modify it under the terms of the GNU Lesser General Public // License as published by the Free Software Foundation; either // version 2.1 of the License. // // This library is distributed in the hope that it will be useful, // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU // Lesser General Public License for more details. // // You should have received a copy of the GNU Lesser General Public // License along with this library; if not, write to the Free Software // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA // // See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com // // File : DriverCGNS_Write.cxx // Created : Fri Aug 5 17:43:54 2011 // Author : Edward AGAPOV (eap) #include "DriverCGNS_Write.hxx" #include "SMDS_MeshNode.hxx" #include "SMDS_VolumeTool.hxx" #include "SMESHDS_GroupBase.hxx" #include "SMESHDS_Mesh.hxx" #include "SMESH_Comment.hxx" #include #include #if CGNS_VERSION < 3100 # define cgsize_t int #endif using namespace std; namespace { //================================================================================ /*! * \brief Return interlace and type of CGNS element for the given SMDSAbs_EntityType */ //================================================================================ const int* getInterlaceAndType( const SMDSAbs_EntityType smType, CGNS_ENUMT( ElementType_t ) & cgType ) { static vector< const int* > interlaces; static vector< CGNS_ENUMT( ElementType_t )> cgTypes; if ( interlaces.empty() ) { interlaces.resize( SMDSEntity_Last, 0 ); cgTypes.resize( SMDSEntity_Last, CGNS_ENUMV( ElementTypeNull )); { static int ids[] = {0}; interlaces[SMDSEntity_0D] = ids; cgTypes [SMDSEntity_0D] = CGNS_ENUMV( NODE ); } { static int ids[] = { 0, 1 }; interlaces[SMDSEntity_Edge] = ids; cgTypes [SMDSEntity_Edge] = CGNS_ENUMV( BAR_2 ); } { static int ids[] = { 0, 1, 2 }; interlaces[SMDSEntity_Quad_Edge] = ids; cgTypes [SMDSEntity_Quad_Edge] = CGNS_ENUMV( BAR_3 ); } { static int ids[] = { 0, 2, 1 }; interlaces[SMDSEntity_Triangle] = ids; cgTypes [SMDSEntity_Triangle] = CGNS_ENUMV( TRI_3 ); } { static int ids[] = { 0, 2, 1, 5, 4, 3 }; interlaces[SMDSEntity_Quad_Triangle] = ids; cgTypes [SMDSEntity_Quad_Triangle] = CGNS_ENUMV( TRI_6 ); } { static int ids[] = { 0, 3, 2, 1 }; interlaces[SMDSEntity_Quadrangle] = ids; cgTypes [SMDSEntity_Quadrangle] = CGNS_ENUMV( QUAD_4 ); } { static int ids[] = { 0,3,2,1,7,6,5,4 }; interlaces[SMDSEntity_Quad_Quadrangle] = ids; cgTypes [SMDSEntity_Quad_Quadrangle] = CGNS_ENUMV( QUAD_8 ); } { static int ids[] = { 0,3,2,1,7,6,5,4,8 }; interlaces[SMDSEntity_BiQuad_Quadrangle] = ids; cgTypes [SMDSEntity_BiQuad_Quadrangle] = CGNS_ENUMV( QUAD_9 ); } { static int ids[] = { 0, 2, 1, 3 }; interlaces[SMDSEntity_Tetra] = ids; cgTypes [SMDSEntity_Tetra] = CGNS_ENUMV( TETRA_4 ); } { static int ids[] = { 0,2,1,3,6,5,4,7,9,8 }; interlaces[SMDSEntity_Quad_Tetra] = ids; cgTypes [SMDSEntity_Quad_Tetra] = CGNS_ENUMV( TETRA_10 ); } { static int ids[] = { 0,3,2,1,4 }; interlaces[SMDSEntity_Pyramid] = ids; cgTypes [SMDSEntity_Pyramid] = CGNS_ENUMV( PYRA_5 ); } { static int ids[] = { 0,3,2,1,4,8,7,6,5,9,12,11,10 }; interlaces[SMDSEntity_Quad_Pyramid] = ids; cgTypes [SMDSEntity_Quad_Pyramid] = CGNS_ENUMV( PYRA_13 ); } { static int ids[] = { 0,2,1,3,5,4 }; interlaces[SMDSEntity_Penta] = ids; cgTypes [SMDSEntity_Penta] = CGNS_ENUMV( PENTA_6 ); } { static int ids[] = { 0,2,1,3,5,4,8,7,6,9,11,10,14,13,12 }; interlaces[SMDSEntity_Quad_Penta] = ids; cgTypes [SMDSEntity_Quad_Penta] = CGNS_ENUMV( PENTA_15 ); } { static int ids[] = { 0,3,2,1,4,7,6,5 }; interlaces[SMDSEntity_Hexa] = ids; cgTypes [SMDSEntity_Hexa] = CGNS_ENUMV( HEXA_8 ); } { static int ids[] = { 0,3,2,1,4,7,6,5,11,10,9,8,12,15,14,13,19,18,17,16 }; interlaces[SMDSEntity_Quad_Hexa] = ids; cgTypes [SMDSEntity_Quad_Hexa] = CGNS_ENUMV( HEXA_20 ); } { static int ids[] = { 0,3,2,1,4,7,6,5,11,10,9,8,12,15,14,13,19,18,17,16, 20, 24,23,22,21, 25, 26}; interlaces[SMDSEntity_TriQuad_Hexa] = ids; cgTypes [SMDSEntity_TriQuad_Hexa] = CGNS_ENUMV( HEXA_27 ); } { cgTypes[SMDSEntity_Polygon] = CGNS_ENUMV( NGON_n ); cgTypes[SMDSEntity_Polyhedra] = CGNS_ENUMV( NFACE_n ); cgTypes[SMDSEntity_Hexagonal_Prism] = CGNS_ENUMV( NFACE_n ); } } cgType = cgTypes[ smType ]; return interlaces[ smType ]; } //================================================================================ /*! * \brief Cut off type of boundary condition from the group name */ //================================================================================ CGNS_ENUMT( BCType_t ) getBCType( string& groupName ) { CGNS_ENUMT( BCType_t ) bcType = CGNS_ENUMV( BCGeneral ); // default type // boundary condition type starts from "BC" size_t bcBeg = groupName.find("BC"); if ( bcBeg != string::npos ) { for ( int t = 0; t < NofValidBCTypes; ++t ) { CGNS_ENUMT( BCType_t ) type = CGNS_ENUMT( BCType_t)( t ); string typeName = cg_BCTypeName( type ); if ( typeName == &groupName[0] + bcBeg ) { bcType = type; while ( bcBeg > 0 && isspace( bcBeg-1 )) --bcBeg; if ( bcBeg == 0 ) groupName = "Group"; else groupName = groupName.substr( 0, bcBeg-1 ); } } } return bcType; } //================================================================================ /*! * \brief Sortable face of a polyhedron */ struct TPolyhedFace { int _id; // id of NGON_n vector< int > _nodes; // lowest node IDs used for sorting TPolyhedFace( const SMDS_MeshNode** nodes, const int nbNodes, int ID):_id(ID) { set< int > ids; for ( int i = 0; i < nbNodes; ++i ) ids.insert( nodes[i]->GetID() ); _nodes.resize( 3 ); // std::min( nbNodes, 4 )); hope 3 nodes is enough set< int >::iterator idIt = ids.begin(); for ( size_t j = 0; j < _nodes.size(); ++j, ++idIt ) _nodes[j] = *idIt; } bool operator< (const TPolyhedFace& o ) const { return _nodes < o._nodes; } }; //================================================================================ /*! * \brief Return CGNS id of an element */ //================================================================================ cgsize_t cgnsID( const SMDS_MeshElement* elem, const map< const SMDS_MeshElement*, cgsize_t >& elem2cgID ) { map< const SMDS_MeshElement*, cgsize_t >::const_iterator e2id = elem2cgID.find( elem ); return ( e2id == elem2cgID.end() ? elem->GetID() : e2id->second ); } } // namespace //================================================================================ /*! * \brief Write the mesh into the CGNS file */ //================================================================================ Driver_Mesh::Status DriverCGNS_Write::Perform() { myErrorMessages.clear(); if ( !myMesh || myMesh->GetMeshInfo().NbElements() < 1 ) return addMessage( !myMesh ? "NULL mesh" : "Empty mesh (no elements)", /*fatal = */true ); // open the file if ( cg_open(myFile.c_str(), CG_MODE_MODIFY, &_fn) != CG_OK && cg_open(myFile.c_str(), CG_MODE_WRITE, &_fn) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); // create a Base // -------------- const int spaceDim = 3; int meshDim = 1; if ( myMesh->NbFaces() > 0 ) meshDim = 2; if ( myMesh->NbVolumes() > 0 ) meshDim = 3; if ( myMeshName.empty() ) { int nbases = 0; if ( cg_nbases( _fn, &nbases) == CG_OK) myMeshName = ( SMESH_Comment("Base_") << nbases+1 ); else myMeshName = "Base_0"; } int iBase; if ( cg_base_write( _fn, myMeshName.c_str(), meshDim, spaceDim, &iBase)) return addMessage( cg_get_error(), /*fatal = */true ); // create a Zone // -------------- int nbCells = myMesh->NbEdges(); if ( meshDim == 3 ) nbCells = myMesh->NbVolumes(); else if ( meshDim == 2 ) nbCells = myMesh->NbFaces(); cgsize_t size[9] = { myMesh->NbNodes(), nbCells, /*NBoundVertex=*/0, 0,0,0,0,0,0 }; int iZone; if ( cg_zone_write( _fn, iBase, "SMESH_Mesh", size, CGNS_ENUMV( Unstructured ), &iZone) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); // Map to store only elements whose an SMDS ID differs from a CGNS one typedef map< const SMDS_MeshElement*, cgsize_t > TElem2cgIDMap; vector< TElem2cgIDMap > elem2cgIDByEntity( SMDSEntity_Last ); TElem2cgIDMap::iterator elem2cgIDIter; TElem2cgIDMap & n2cgID = elem2cgIDByEntity[ SMDSEntity_Node ]; // Write nodes // ------------ { vector< double > coords( myMesh->NbNodes() ); int iC; // X SMDS_NodeIteratorPtr nIt = myMesh->nodesIterator( /*idInceasingOrder=*/true ); for ( int i = 0; nIt->more(); ++i ) coords[i] = nIt->next()->X(); if ( cg_coord_write( _fn, iBase, iZone, CGNS_ENUMV(RealDouble), "CoordinateX", &coords[0], &iC) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); // Y nIt = myMesh->nodesIterator( /*idInceasingOrder=*/true ); for ( int i = 0; nIt->more(); ++i ) coords[i] = nIt->next()->Y(); if ( cg_coord_write( _fn, iBase, iZone, CGNS_ENUMV(RealDouble), "CoordinateY", &coords[0], &iC) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); // Z nIt = myMesh->nodesIterator( /*idInceasingOrder=*/true ); for ( int i = 0; nIt->more(); ++i ) coords[i] = nIt->next()->Z(); if ( cg_coord_write( _fn, iBase, iZone, CGNS_ENUMV(RealDouble), "CoordinateZ", &coords[0], &iC) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); // store CGNS ids of nodes nIt = myMesh->nodesIterator( /*idInceasingOrder=*/true ); for ( int i = 0; nIt->more(); ++i ) { const SMDS_MeshElement* n = nIt->next(); if ( n->GetID() != i+1 ) n2cgID.insert( n2cgID.end(), make_pair( n, i+1 )); } } // Write elements // --------------- cgsize_t cgID = 1, startID; // write into a section all successive elements of one geom type int iSec; vector< cgsize_t > elemData; SMDS_ElemIteratorPtr elemIt = myMesh->elementsIterator(); const SMDS_MeshElement* elem = elemIt->next(); while ( elem ) { const SMDSAbs_EntityType elemType = elem->GetEntityType(); CGNS_ENUMT( ElementType_t ) cgType; const int* interlace = getInterlaceAndType( elemType, cgType ); TElem2cgIDMap & elem2cgID = elem2cgIDByEntity[ elemType ]; elemData.clear(); startID = cgID; if ( interlace ) // STANDARD elements do { for ( int i = 0, nb = elem->NbNodes(); i < nb; ++i ) elemData.push_back( cgnsID( elem->GetNode( interlace[i] ), n2cgID )); if ( elem->GetID() != cgID ) elem2cgID.insert( elem2cgID.end(), make_pair( elem, cgID )); ++cgID; elem = elemIt->more() ? elemIt->next() : 0; } while ( elem && elem->GetEntityType() == elemType ); else if ( elemType == SMDSEntity_Polygon ) // POLYGONS do { elemData.push_back( elem->NbNodes() ); for ( int i = 0, nb = elem->NbNodes(); i < nb; ++i ) elemData.push_back( cgnsID( elem->GetNode(i), n2cgID )); if ( elem->GetID() != cgID ) elem2cgID.insert( elem2cgID.end(), make_pair( elem, cgID )); ++cgID; elem = elemIt->more() ? elemIt->next() : 0; } while ( elem && elem->GetEntityType() == elemType ); else if ( elemType == SMDSEntity_Polyhedra || elemType == SMDSEntity_Hexagonal_Prism) // POLYHEDRA { // to save polyhedrons after all const SMDS_MeshInfo& meshInfo = myMesh->GetMeshInfo(); if ( meshInfo.NbPolyhedrons() == meshInfo.NbElements() - cgID + 1 ) break; // only polyhedrons remain while ( elem && elem->GetEntityType() == elemType ) elem = elemIt->more() ? elemIt->next() : 0; continue; } SMESH_Comment sectionName( cg_ElementTypeName( cgType )); sectionName << " " << startID << " - " << cgID-1; if ( cg_section_write(_fn, iBase, iZone, sectionName.c_str(), cgType, startID, cgID-1, /*nbndry=*/0, &elemData[0], &iSec) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); } // Write polyhedral volumes // ------------------------- if ( myMesh->GetMeshInfo().NbElements() > cgID-1 ) // polyhedra or hexagonal prisms remain { // the polyhedron (NFACE_n) is described as a set of signed face IDs, // so first we are to write all polygones (NGON_n) bounding polyhedrons vector< cgsize_t > faceData; set< TPolyhedFace > faces; set< TPolyhedFace >::iterator faceInSet; vector faceNodesVec; int nbPolygones = 0, faceID; SMDS_VolumeTool vol; elemData.clear(); int nbPolyhTreated = 0; TElem2cgIDMap * elem2cgID = 0; TElem2cgIDMap & n2cgID = elem2cgIDByEntity[ SMDSEntity_Node ]; SMDS_ElemIteratorPtr elemIt = myMesh->elementsIterator(); while ( elemIt->more() ) { elem = elemIt->next(); SMDSAbs_EntityType type = elem->GetEntityType(); if ( type == SMDSEntity_Polyhedra || type == SMDSEntity_Hexagonal_Prism ) { ++nbPolyhTreated; vol.Set( elem ); vol.SetExternalNormal(); const int nbFaces = vol.NbFaces(); elemData.push_back( nbFaces ); for ( int iF = 0; iF < nbFaces; ++iF ) { const int nbNodes = vol.NbFaceNodes( iF ); const SMDS_MeshNode** faceNodes = vol.GetFaceNodes( iF ); faceNodesVec.assign( faceNodes, faceNodes + nbNodes ); if (( elem = myMesh->FindElement( faceNodesVec, SMDSAbs_Face, /*noMedium=*/false))) { // a face of the polyhedron is present in the mesh faceID = cgnsID( elem, elem2cgIDByEntity[ elem->GetEntityType() ]); } else if ( vol.IsFreeFace( iF )) { // the face is not shared by volumes faceID = cgID++; ++nbPolygones; faceData.push_back( nbNodes ); for ( int i = 0; i < nbNodes; ++i ) faceData.push_back( cgnsID( faceNodes[i], n2cgID )); } else { TPolyhedFace face( faceNodes, nbNodes, cgID ); faceInSet = faces.insert( faces.end(), face ); if ( faceInSet->_id == cgID ) // the face encounters for the 1st time { faceID = cgID++; ++nbPolygones; faceData.push_back( nbNodes ); for ( int i = 0; i < nbNodes; ++i ) faceData.push_back( cgnsID( faceNodes[i], n2cgID )); } else { // the face encounters for the 2nd time; we hope it won't encounter once more, // for that we can erase it from the set of faces faceID = -faceInSet->_id; faces.erase( faceInSet ); } } elemData.push_back( faceID ); } } } if ( nbPolygones > 0 ) { if ( cg_section_write(_fn, iBase, iZone, "Faces of Polyhedrons", CGNS_ENUMV( NGON_n ), cgID - nbPolygones, cgID-1, /*nbndry=*/0, &faceData[0], &iSec) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); } if ( cg_section_write(_fn, iBase, iZone, "Polyhedrons", CGNS_ENUMV( NFACE_n ), cgID, cgID+nbPolyhTreated-1, /*nbndry=*/0, &elemData[0], &iSec) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true ); if ( !myMesh->GetGroups().empty() ) { // store CGNS ids of polyhedrons elem2cgID = &elem2cgIDByEntity[ SMDSEntity_Polyhedra ]; elemIt = myMesh->elementsIterator(); while ( elemIt->more() ) { elem = elemIt->next(); if ( elem->GetEntityType() == SMDSEntity_Polyhedra ) { if ( elem->GetID() != cgID ) elem2cgID->insert( elem2cgID->end(), make_pair( elem, cgID )); ++cgID; } } } } // write polyhedral volumes // Write groups as boundary conditions // ------------------------------------ const set& groups = myMesh->GetGroups(); set::const_iterator grpIt = groups.begin(); set< string > groupNames; groupNames.insert(""); // to avoid duplicated and empty names for ( ; grpIt != groups.end(); ++grpIt ) { const SMESHDS_GroupBase* group = *grpIt; // write BC location (default is Vertex) CGNS_ENUMT( GridLocation_t ) location = CGNS_ENUMV( Vertex ); if ( group->GetType() != SMDSAbs_Node ) { switch ( meshDim ) { case 3: switch ( group->GetType() ) { case SMDSAbs_Volume: location = CGNS_ENUMV( FaceCenter ); break; // !!! case SMDSAbs_Face: location = CGNS_ENUMV( FaceCenter ); break; // OK case SMDSAbs_Edge: location = CGNS_ENUMV( EdgeCenter ); break; // OK default:; } break; case 2: switch ( group->GetType() ) { case SMDSAbs_Face: location = CGNS_ENUMV( FaceCenter ); break; // ??? case SMDSAbs_Edge: location = CGNS_ENUMV( EdgeCenter ); break; // OK default:; } break; case 1: location = CGNS_ENUMV( EdgeCenter ); break; // ??? break; } } // try to extract type of boundary condition from the group name string name = group->GetStoreName(); CGNS_ENUMT( BCType_t ) bcType = getBCType( name ); while ( !groupNames.insert( name ).second ) name = (SMESH_Comment( "Group_") << groupNames.size()); // write IDs of elements vector< cgsize_t > pnts; pnts.reserve( group->Extent() ); SMDS_ElemIteratorPtr elemIt = group->GetElements(); while ( elemIt->more() ) { const SMDS_MeshElement* elem = elemIt->next(); pnts.push_back( cgnsID( elem, elem2cgIDByEntity[ elem->GetEntityType() ])); } int iBC; if ( cg_boco_write( _fn, iBase, iZone, name.c_str(), bcType, CGNS_ENUMV( PointList ), pnts.size(), &pnts[0], &iBC) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */true); // write BC location if ( location != CGNS_ENUMV( Vertex )) { if ( cg_boco_gridlocation_write( _fn, iBase, iZone, iBC, location) != CG_OK ) return addMessage( cg_get_error(), /*fatal = */false); } } return DRS_OK; } //================================================================================ /*! * \brief Constructor */ //================================================================================ DriverCGNS_Write::DriverCGNS_Write(): _fn(0) { } //================================================================================ /*! * \brief Close the cgns file at destruction */ //================================================================================ DriverCGNS_Write::~DriverCGNS_Write() { if ( _fn > 0 ) cg_close( _fn ); }