smesh/src/Tools/ZCracksPlug/utilityFunctions.py
2021-03-23 17:44:29 +03:00

424 lines
11 KiB
Python

# Copyright (C) 2016-2021 EDF R&D
#
# This library is free software; you can redistribute it and/or
# modify it under the terms of the GNU Lesser General Public
# License as published by the Free Software Foundation; either
# version 2.1 of the License, or (at your option) any later version.
#
# This library is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this library; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
# See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
#
#import sys
#sys.path.append('/home/I60976/00_PROJETS/2015_INTEGRATION_ZCRACKS/zcracks_salome/zcracks')
import numpy, subprocess, sys
from os import remove, getpid, path, environ
from .output import message
def calcCoordVectors(normalIN, directionIN):
V3TEMP=numpy.cross(normalIN,directionIN)
directionTEMP=numpy.cross(V3TEMP,normalIN)
normalOUT=numpy.array(normalIN)/numpy.linalg.norm(normalIN)
directionOUT=numpy.array(directionTEMP)/numpy.linalg.norm(directionTEMP)
V3OUT=numpy.array(V3TEMP)/numpy.linalg.norm(V3TEMP)
return(normalOUT, directionOUT, V3OUT)
def testStrictRange(x, inf=0.0, sup=False):
test=False
c1=(isinstance(x, list))
if c1:
c2=(len(x)==1)
if c2:
c3=(isinstance(x[0], type(inf)))
if c3:
c4=(x[0]>inf)
c5=True
if sup!=False:
c5=(x[0]<sup)
if c4 and c5:
test=True
return(test)
def test3dVector(x):
test=False
c1=(isinstance(x, list))
if c1:
c2=(len(x)==3)
if c2:
c3=(isinstance(x[0], float))
c4=(isinstance(x[1], float))
c5=(isinstance(x[2], float))
if c3 and c4 and c5:
test=True
return(test)
def testRange(x, inf=0.0, sup=False):
test=False
c1=(isinstance(x, list))
if c1:
c2=(len(x)==1)
if c2:
c3=(isinstance(x[0], type(inf)))
if c3:
c4=(x[0]>=inf)
c5=True
if sup!=False:
c5=(x[0]<=sup)
if c4 and c5:
test=True
return(test)
def check(data):
OK=True
test=False
c1=(data['crackedName']!='')
if c1:
test=True
if not test:
message('E','Invalid Cracked name',goOn=True)
OK=False
test=False
c1=path.isfile(data['saneName'])
if c1:
c2=(data['saneName']!=data['crackedName'])
if c2:
test=True
else:
message('E','sane mesh and cracked mesh are identical',goOn=True)
OK=False
if not test:
message('E','Bad sane mesh file',goOn=True)
OK=False
test=testStrictRange(data['minSize'])
if not test:
message('E','invalid min size',goOn=True)
OK=False
test=testStrictRange(data['maxSize'])
if not test:
message('E','invalid max size',goOn=True)
OK=False
if OK:
test=(data['maxSize'][0]>=data['minSize'][0])
if not test:
message('E','min size greater than max size',goOn=True)
OK=False
test=testStrictRange(data['extractLength'])
if not test:
message('E','invalid extract length',goOn=True)
OK=False
test=testRange(data['gradation'], inf=1.0)
if not test:
message('E','invalid Gradation',goOn=True)
OK=False
test=testRange(data['layers'], inf=1)
if not test:
message('E','invalid layers',goOn=True)
OK=False
test=testRange(data['iterations'], inf=1)
if not test:
message('E','invalid iterations',goOn=True)
OK=False
return(OK)
def calcElemSize(A, R):
x=R*(1.-numpy.cos(A/2.))
h=R*numpy.sin(A/2.)
return(x, h)
def meshCrack(geomObject, minSize, maxSize, chordal, dim):
import salome
salome.salome_init()
import SMESH, SALOMEDS
from salome.smesh import smeshBuilder
smesh = smeshBuilder.New()
Maillage = smesh.Mesh(geomObject)
if dim==3:
MG_CADSurf = Maillage.Triangle(algo=smeshBuilder.MG_CADSurf)
MG_CADSurf_Parameters = MG_CADSurf.Parameters()
MG_CADSurf_Parameters.SetPhysicalMesh( 0 )
MG_CADSurf_Parameters.SetGeometricMesh( 1 )
MG_CADSurf_Parameters.SetMinSize( minSize )
MG_CADSurf_Parameters.SetMaxSize( maxSize )
MG_CADSurf_Parameters.SetChordalError( chordal )
elif dim==2:
Regular_1D = Maillage.Segment()
Adaptive = Regular_1D.Adaptive(minSize,maxSize,chordal)
NETGEN_2D_ONLY = Maillage.Triangle(algo=smeshBuilder.NETGEN_2D)
else:
message('E',"error in mesh dimension",goOn=True)
isDone = Maillage.Compute()
#crack1 = Maillage.CreateEmptyGroup( SMESH.NODE, 'crack' )
#nbAdd = crack1.AddFrom( Maillage.GetMesh() )
#crack2 = Maillage.CreateEmptyGroup( SMESH.NODE, 'surface' )
#nbAdd = crack2.AddFrom( Maillage.GetMesh() )
return(Maillage)
def extendElsets(meshFile, outFile=None):
if outFile==None: outFile=meshFile
if not path.isfile(meshFile):
message('E','Mesh med file is not valid')
return('error')
import SMESH, salome
#salome.salome_init()
from salome.smesh import smeshBuilder
smesh = smeshBuilder.New()
([mesh], status) = smesh.CreateMeshesFromMED(meshFile)
if mesh.NbVolumes()>0:
case2D=False
mesh.Reorient2DBy3D( [ mesh ], mesh, 1 )
else:
case2D=True
mesh=cleanGroups(mesh)
# Node color status
nodeList=mesh.GetNodesId()
volElemList=mesh.GetElementsByType(SMESH.VOLUME)
surfElemList=mesh.GetElementsByType(SMESH.FACE)
edgeElemList=mesh.GetElementsByType(SMESH.EDGE)
colorList=[-1]*len(nodeList)
case2D=True
for group in mesh.GetGroups():
if group.GetType()==SMESH.VOLUME and group.GetName()[:5]=='sides' : case2D=False
sides=[]
for group in mesh.GetGroups():
if case2D:
if group.GetType()==SMESH.FACE and group.GetName()[:5]=='sides':
sides.append(group)
else:
if group.GetType()==SMESH.VOLUME and group.GetName()[:5]=='sides':
sides.append(group)
sortedSides=[None]*len(sides)
for group in sides:
N=group.GetName().replace('sides','').replace('_bset','').replace(' ','')
N=int(N)
sortedSides[N]=group
elems=group.GetIDs()
for elemId in elems:
for elemNodeId in mesh.GetElemNodes(elemId) :
colorList[elemNodeId-1]=N
#print colorList
crackOnly=True
for iN in range(len(sides)/2):
side0=sortedSides[2*iN]
side1=sortedSides[2*iN+1]
elemsOfside0=side0.GetIDs()
elemsOfside1=side1.GetIDs()
NodesOfside0=[]
NodesOfside1=[]
for elem in elemsOfside0: NodesOfside0+=mesh.GetElemNodes(elem)
for elem in elemsOfside1: NodesOfside1+=mesh.GetElemNodes(elem)
front=set(NodesOfside0).intersection(set(NodesOfside1))
if len(front)==0: crackOnly=False
if crackOnly:
mesh.ExportMED(outFile)
return('crack')
# Propagates color using elem connectivity
# Always propagates max color
#elemToTreat=volElemList
#while len(elemToTreat)>0 :
#print len(elemToTreat)
#for elemId in elemToTreat:
#minColor=sys.maxint
#maxColor=-sys.maxint
#for elemNodeId in mesh.GetElemNodes(elemId) :
#nodeColor=colorList[elemNodeId-1]
#if nodeColor<minColor : minColor=nodeColor
#if nodeColor>maxColor : maxColor=nodeColor
#if minColor!=maxColor :
#elemToTreat.remove(elemId)
#for elemNodeId in mesh.GetElemNodes(elemId) :
#colorList[elemNodeId-1]=maxColor
ifChanged=True
if case2D:
elemList=[surfElemList,edgeElemList]
grElemList=[[],[]]
else:
elemList=[volElemList,surfElemList,edgeElemList]
grElemList=[[],[],[]]
while ifChanged :
ifChanged=False
for elemId in elemList[0]:
minColor=sys.maxsize
maxColor=-sys.maxsize
for elemNodeId in mesh.GetElemNodes(elemId) :
nodeColor=colorList[elemNodeId-1]
if nodeColor<minColor : minColor=nodeColor
if nodeColor>maxColor : maxColor=nodeColor
if minColor!=maxColor :
ifChanged = True
for elemNodeId in mesh.GetElemNodes(elemId) :
colorList[elemNodeId-1]=maxColor
for l in grElemList:
for x in range(len(sides)):
l.append([])
for N, el in enumerate(elemList):
for elemId in el:
elemNodesId=mesh.GetElemNodes(elemId)
elemColor=colorList[elemNodesId[0]-1]
if elemColor>=0:
grElemList[N][elemColor].append(elemId)
#for elemId in surfElemList:
#elemNodesId=mesh.GetElemNodes(elemId)
#elemColor=colorList[elemNodesId[0]-1]
#if elemColor>=0:
#selem[elemColor].append(elemId)
for n in range(len(sides)):
if case2D:
mesh.MakeGroupByIds('Extended_side%d' %n ,SMESH.FACE,grElemList[0][n])
mesh.MakeGroupByIds('Extended_side%d' %n ,SMESH.EDGE,grElemList[1][n])
else:
mesh.MakeGroupByIds('Extended_side%d' %n ,SMESH.VOLUME,grElemList[0][n])
mesh.MakeGroupByIds('Extended_side%d' %n ,SMESH.FACE,grElemList[1][n])
mesh.MakeGroupByIds('Extended_side%d' %n ,SMESH.EDGE,grElemList[2][n])
if outFile==None: outFile=meshFile
mesh.ExportMED(outFile)
return(True)
def cleanGroups(mesh):
import SMESH
for group in mesh.GetGroups():
if '_bset' in group.GetName():
group.SetName(group.GetName().replace('_bset',''))
if group.GetType()==SMESH.NODE:
if group.GetName() in ['SURFACE','lip','SFRONT_NODES','FRONT']: mesh.RemoveGroup(group)
#elif group.GetType()==SMESH.EDGE:
elif group.GetType()==SMESH.FACE:
if group.GetName() in ['SURFACE','Nlip']:
mesh.RemoveGroup(group)
elif group.GetType()==SMESH.VOLUME:
if (group.GetName() in ['ELSET0','AUTO']) or (group.GetName()[:4] in ['SIDE']) :
mesh.RemoveGroup(group)
return(mesh)
def getMaxAspectRatio(tmpdir):
logFile=path.join(tmpdir,'MESHING_OUTPUT')
print(logFile)
if not path.isfile(logFile): return(-1)
import re
f = open(logFile, "r")
for line in f:
if re.search("WORST ELEMENT QUALITY", line): maxAR=line
f.close()
for r in [' ','WORSTELEMENTQUALITY','\n']: maxAR=maxAR.replace(r,'')
return(float(maxAR))
def removeFromSessionPath(envVar, patern):
if not isinstance(patern, list): patern=[patern]
if not isinstance(envVar, list): envVar=[envVar]
for env in envVar:
path=environ[env]
listPath=path.split(':')
for p in listPath:
for pat in patern:
if pat in p:
path=path.replace(p,'')
path.replace('::',':')
environ[env]=path
#def isPlane(geomObject, eps=1.e-9):
#import salome
#salome.salome_init()
#theStudy = salome.myStudy
#import salome_notebook
#notebook = salome_notebook.NoteBook(theStudy)
#import GEOM
#from salome.geom import geomBuilder
#geompy = geomBuilder.New(theStudy)
#Vs=geompy.SubShapeAll(geomObject, geompy.ShapeType["VERTEX"])
#if len(Vs)<=3:
#return(True)
#elif len(Vs)>3:
#P0=numpy.array(geompy.GetPosition(Vs[0])[:3])
#P1=numpy.array(geompy.GetPosition(Vs[1])[:3])
#P2=numpy.array(geompy.GetPosition(Vs[2])[:3])
#V01=P1-P0
#V02=P2-P0
#V12=P2-P1
#norm01=numpy.linalg.norm(V01)
#norm02=numpy.linalg.norm(V02)
#norm12=numpy.linalg.norm(V12)
#if (norm01<eps) or (norm02<eps) or (norm12<eps):
#print 'error'
#return(False)
#else:
#N=numpy.cross(V01,V02)
#N=N/numpy.linalg.norm(N)
#maxDist=0.
#for P in Vs[3:]:
#Pi=numpy.array(geompy.GetPosition(P)[:3])
#V=Pi-P0
#d=numpy.dot(V,N)
#maxDist=numpy.max([maxDist,numpy.abs(d)])
#else:
#print 'error'
#return(False)
#return(maxDist<eps)