New: failed analytics
This commit is contained in:
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1
.gitignore
vendored
1
.gitignore
vendored
@ -18,3 +18,4 @@ env/
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*.toc
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*.out
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*.egg-info
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.ipynb_checkpoints/
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708
playground/analytics.ipynb
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708
playground/analytics.ipynb
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File diff suppressed because one or more lines are too long
@ -39,17 +39,25 @@
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{
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"cell_type": "code",
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"execution_count": 4,
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"id": "86b8162b-ed07-4c65-9c31-3f18daafc915",
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"id": "3bc80bca-03ce-416e-be2f-ab7ae2af95fa",
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"metadata": {},
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"outputs": [],
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"source": [
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"df_keys = [ key for key in df.keys() ]"
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"df_numeric = df[[\n",
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" col for col in df.columns \n",
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" if not isinstance(df[col][0], str) \n",
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" and not isinstance(df[col][0], numpy.bool_)\n",
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" and not isinstance(df[col][0], dict)\n",
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" and not isinstance(df[col][0], list)\n",
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" and not df[col][0] is None\n",
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" and not col[-3: ] == \"_id\"\n",
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"]]"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 18,
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"id": "3bc80bca-03ce-416e-be2f-ab7ae2af95fa",
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"execution_count": 5,
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"id": "eab92bcc-8f1f-4490-8dc6-8ebf191d6cf2",
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"metadata": {},
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"outputs": [
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{
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@ -58,7 +66,7 @@
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"<AxesSubplot:>"
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]
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},
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"execution_count": 18,
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"execution_count": 5,
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"metadata": {},
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"output_type": "execute_result"
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},
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@ -74,21 +82,190 @@
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}
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],
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"source": [
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"df_numeric = df[[\n",
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" col for col in df.columns \n",
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" if not isinstance(df[col][0], str) \n",
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" and not isinstance(df[col][0], numpy.bool_)\n",
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" and not isinstance(df[col][0], dict)\n",
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" and not col[-3: ] == \"_id\"\n",
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"]]\n",
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"seaborn.set(rc = { \"figure.figsize\": (30, 20) })\n",
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"seaborn.heatmap(df_numeric.corr(), annot = True)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 6,
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"id": "7611c892-1e13-404e-849e-3cfa15d8dfca",
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"metadata": {},
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"outputs": [],
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"source": [
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"x = df_numeric[[\"theta\", \"r0\", \"L\", \"radius\"]] #.drop(columns = [\"flowRate\"])\n",
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"y = df_numeric[\"flowRate\"]"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 7,
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"id": "1a38aaa0-89fb-40f7-abce-e500ab696349",
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"metadata": {},
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"outputs": [],
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"source": [
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"from sklearn.model_selection import train_test_split\n",
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"xtr, xte, ytr, yte = train_test_split(x, y, test_size = 0.2, random_state = 100)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 8,
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"id": "1b7e9f62-35a9-4a1a-9ffa-a2a6e757ff46",
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"metadata": {},
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"outputs": [],
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"source": [
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"from sklearn import preprocessing\n",
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"scaler = preprocessing.MinMaxScaler()\n",
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"x_scaled = scaler.fit_transform(xtr)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 9,
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"id": "19bd2f52-a5bf-404c-93f7-0626bc35a915",
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"DecisionTreeRegressor(random_state=500)"
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]
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},
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"execution_count": 9,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"from sklearn.tree import DecisionTreeRegressor\n",
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"neigh = DecisionTreeRegressor(random_state = 500)\n",
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"neigh.fit(x_scaled, ytr)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 10,
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"id": "d063265f-2f06-4290-811e-b6b1753bcac9",
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"2.664398739090909e-15"
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]
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},
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"execution_count": 10,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"from sklearn.metrics import mean_absolute_error\n",
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"xte_scaled = scaler.transform(xte)\n",
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"y_pred = neigh.predict(xte_scaled)\n",
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"mean_absolute_error(yte, y_pred)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 11,
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"id": "762af50c-371a-4ba5-b5ab-763970ef2a37",
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"metadata": {},
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"outputs": [],
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"source": [
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"#df_numeric[[\"theta\", \"r0\", \"L\", \"radius\", \"flowRate\", \"volumeCell\", \"volume\"]]"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 12,
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"id": "7a951647-efa1-4231-b96d-f67bc0ed6c33",
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/html": [
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"<div>\n",
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"<style scoped>\n",
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" .dataframe tbody tr th:only-of-type {\n",
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" vertical-align: middle;\n",
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" }\n",
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"\n",
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" .dataframe tbody tr th {\n",
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" vertical-align: top;\n",
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" }\n",
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"\n",
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" .dataframe thead th {\n",
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" text-align: right;\n",
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" }\n",
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"</style>\n",
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"<table border=\"1\" class=\"dataframe\">\n",
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" <thead>\n",
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" <tr style=\"text-align: right;\">\n",
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" <th></th>\n",
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" <th>theta</th>\n",
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" <th>r0</th>\n",
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" <th>L</th>\n",
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" <th>radius</th>\n",
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" </tr>\n",
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" </thead>\n",
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" <tbody>\n",
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" <tr>\n",
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" <th>0</th>\n",
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" <td>0.29</td>\n",
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" <td>1.0</td>\n",
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" <td>2.0</td>\n",
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" <td>1.408451</td>\n",
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" </tr>\n",
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" </tbody>\n",
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"</table>\n",
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"</div>"
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],
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"text/plain": [
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" theta r0 L radius\n",
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"0 0.29 1.0 2.0 1.408451"
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]
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},
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"execution_count": 12,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"test_df = DataFrame([{\n",
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" \"theta\": 0.29,\n",
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" \"r0\": 1.,\n",
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" \"L\": 2.,\n",
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" \"radius\": 1. / (1. - 0.29)\n",
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"}]); test_df"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 13,
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"id": "bc9204db-bde4-4032-b4f5-313e99e25ab5",
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/plain": [
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"array([4.53058768e-15])"
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]
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},
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"execution_count": 13,
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"metadata": {},
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"output_type": "execute_result"
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}
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],
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"source": [
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"neigh.predict(scaler.transform(test_df))"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "1fda6819-a8da-4751-be3d-d62320b799ae",
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"id": "4b95277f-c49e-42b9-8d5f-3334d5ca7729",
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"metadata": {},
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"outputs": [],
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"source": []
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@ -96,15 +273,7 @@
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "f19311bb-e992-4592-83b2-0b003a6b78ae",
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"metadata": {},
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"outputs": [],
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"source": []
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"id": "7f06bc5b-80ba-4763-8fec-121c0623ccf2",
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"id": "c56035b1-18d5-4c88-94b6-da4d7eccac9a",
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"metadata": {},
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"outputs": [],
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"source": []
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@ -112,7 +281,7 @@
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],
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"metadata": {
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"kernelspec": {
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"display_name": "Python 3",
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"display_name": "Python 3 (ipykernel)",
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"language": "python",
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"name": "python3"
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},
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@ -126,7 +295,7 @@
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.9.7"
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"version": "3.9.6"
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}
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},
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"nbformat": 4,
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BIN
playground/woPrismaticLayer-2/anisotropy.db
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BIN
playground/woPrismaticLayer-2/anisotropy.db
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Binary file not shown.
281
playground/woPrismaticLayer-2/anisotropy.toml
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281
playground/woPrismaticLayer-2/anisotropy.toml
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@ -0,0 +1,281 @@
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# -*- coding: utf-8 -*-
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# This file is part of anisotropy.
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# License: GNU GPL version 3, see the file "LICENSE" for details.
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[logger]
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name = "anisotropy"
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format = "[ %(levelname)s ] %(message)s"
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[base]
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simple = true
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bodyCentered = true
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faceCentered = true
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[[structures]]
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[structures.structure]
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type = "simple"
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# auto # from theta: list # theta: float
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theta = [0.01, 0.28, 0.01] # [min, max, step]
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# auto # from directions:list # direction: list
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directions = [
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[1, 0, 0],
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[0, 0, 1],
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[1, 1, 1]
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]
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# r0 =
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# L =
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# radius =
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filletsEnabled = true
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# auto # fillets: float
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[structures.mesh]
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maxSize = 0.5
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minSize = 0.05
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fineness = 5
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growthRate = 0.5
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nbSegPerEdge = 2
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nbSegPerRadius = 1
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chordalErrorEnabled = true
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chordalError = 0.25
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secondOrder = false
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optimize = true
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quadAllowed = false
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useSurfaceCurvature = true
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fuseEdges = true
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checkChartBoundary = false
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viscousLayers = false
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thickness = [0.01, 0.005] # [min, max] # step is controlled by theta count
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numberOfLayers = 1
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stretchFactor = 1
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isFacesToIgnore = true
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facesToIgnore = ["inlet", "outlet"]
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# auto # faces: list
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extrusionMethod = "SURF_OFFSET_SMOOTH"
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[[structures.submesh]]
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name = "strips"
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maxSize = 0.5
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minSize = 0.05
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fineness = 5
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growthRate = 0.2
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nbSegPerEdge = 2
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nbSegPerRadius = 3
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chordalErrorEnabled = true
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chordalError = 0.25
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secondOrder = false
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optimize = true
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quadAllowed = false
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useSurfaceCurvature = true
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fuseEdges = true
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checkChartBoundary = false
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[structures.flowapproximation]
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transportProperties.nu = 1e-6
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pressure.boundaryField.inlet = { type = "fixedValue", value = 1e-3 }
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pressure.boundaryField.outlet = { type = "fixedValue", value = 0.0 }
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# multiplication velocity value with flow direction vector
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velocity.boundaryField.inlet = { type = "fixedValue", value = 6e-5 }
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velocity.boundaryField.outlet = { type = "zeroGradient", value = "None" }
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[structures.flow]
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scale = [ 1e-5, 1e-5, 1e-5 ]
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transportProperties.nu = 1e-6
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pressure.boundaryField.inlet = { type = "fixedValue", value = 1e-3 }
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pressure.boundaryField.outlet = { type = "fixedValue", value = 0.0 }
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velocity.boundaryField.inlet = { type = "pressureInletVelocity", value = 0.0 }
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velocity.boundaryField.outlet = { type = "zeroGradient", value = "None" }
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[[structures]]
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[structures.structure]
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type = "bodyCentered"
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# auto # from theta: list # theta: float
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theta = [0.01, 0.17, 0.01] # [min, max, step]
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# auto # from directions:list # direction: list
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directions = [
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[1, 0, 0],
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[0, 0, 1],
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[1, 1, 1]
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]
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# r0 =
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# L =
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# radius =
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filletsEnabled = true
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# auto # fillets: float
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[structures.mesh]
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maxSize = 0.5
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minSize = 0.05
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fineness = 5
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growthRate = 0.5
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nbSegPerEdge = 2
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nbSegPerRadius = 1
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chordalErrorEnabled = true
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chordalError = 0.25
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secondOrder = false
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optimize = true
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quadAllowed = false
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useSurfaceCurvature = true
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fuseEdges = true
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checkChartBoundary = false
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viscousLayers = false
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thickness = [0.005, 0.0005] # [min, max] # step is controlled by theta count
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numberOfLayers = 1
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stretchFactor = 1
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isFacesToIgnore = true
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facesToIgnore = ["inlet", "outlet"]
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# auto # faces: list
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extrusionMethod = "SURF_OFFSET_SMOOTH"
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[[structures.submesh]]
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name = "strips"
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maxSize = 0.5
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minSize = 0.05
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fineness = 5
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growthRate = 0.2
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nbSegPerEdge = 2
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nbSegPerRadius = 3
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chordalErrorEnabled = true
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chordalError = 0.25
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secondOrder = false
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optimize = true
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quadAllowed = false
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useSurfaceCurvature = true
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fuseEdges = true
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checkChartBoundary = false
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[structures.flowapproximation]
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transportProperties.nu = 1e-6
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pressure.boundaryField.inlet = { type = "fixedValue", value = 1e-3 }
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pressure.boundaryField.outlet = { type = "fixedValue", value = 0.0 }
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# multiplication velocity value with direction vector
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velocity.boundaryField.inlet = { type = "fixedValue", value = 6e-5 }
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velocity.boundaryField.outlet = { type = "zeroGradient", value = "None" }
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[structures.flow]
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scale = [ 1e-5, 1e-5, 1e-5 ]
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transportProperties.nu = 1e-6
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pressure.boundaryField.inlet = { type = "fixedValue", value = 1e-3 }
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pressure.boundaryField.outlet = { type = "fixedValue", value = 0.0 }
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velocity.boundaryField.inlet = { type = "pressureInletVelocity", value = 0.0 }
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velocity.boundaryField.outlet = { type = "zeroGradient", value = "None" }
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[[structures]]
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[structures.structure]
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type = "faceCentered"
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# auto # from theta: list # theta: float
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theta = [0.01, 0.12, 0.01] # [min, max, step]
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# auto # from directions:list # direction: list
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directions = [
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[1, 0, 0],
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[0, 0, 1],
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[1, 1, 1]
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]
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# r0 =
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# L =
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# radius =
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filletsEnabled = true
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# auto # fillets: float
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||||
|
||||
[structures.mesh]
|
||||
maxSize = 0.5
|
||||
minSize = 0.05
|
||||
|
||||
fineness = 5
|
||||
growthRate = 0.5
|
||||
nbSegPerEdge = 2
|
||||
nbSegPerRadius = 1
|
||||
|
||||
chordalErrorEnabled = true
|
||||
chordalError = 0.25
|
||||
|
||||
secondOrder = false
|
||||
optimize = true
|
||||
quadAllowed = false
|
||||
useSurfaceCurvature = true
|
||||
fuseEdges = true
|
||||
checkChartBoundary = false
|
||||
|
||||
viscousLayers = false
|
||||
thickness = [0.001, 0.0005] # [min, max] # step is controlled by theta count
|
||||
numberOfLayers = 1
|
||||
stretchFactor = 1
|
||||
isFacesToIgnore = true
|
||||
facesToIgnore = ["inlet", "outlet"]
|
||||
# auto # faces: list
|
||||
extrusionMethod = "SURF_OFFSET_SMOOTH"
|
||||
|
||||
[[structures.submesh]]
|
||||
name = "strips"
|
||||
maxSize = 0.5
|
||||
minSize = 0.05
|
||||
|
||||
fineness = 5
|
||||
growthRate = 0.2
|
||||
nbSegPerEdge = 2
|
||||
nbSegPerRadius = 3
|
||||
|
||||
chordalErrorEnabled = true
|
||||
chordalError = 0.25
|
||||
|
||||
secondOrder = false
|
||||
optimize = true
|
||||
quadAllowed = false
|
||||
useSurfaceCurvature = true
|
||||
fuseEdges = true
|
||||
checkChartBoundary = false
|
||||
|
||||
[structures.flowapproximation]
|
||||
transportProperties.nu = 1e-6
|
||||
|
||||
pressure.boundaryField.inlet = { type = "fixedValue", value = 1e-3 }
|
||||
pressure.boundaryField.outlet = { type = "fixedValue", value = 0.0 }
|
||||
|
||||
# multiplication velocity value with direction vector
|
||||
velocity.boundaryField.inlet = { type = "fixedValue", value = 6e-5 }
|
||||
velocity.boundaryField.outlet = { type = "zeroGradient", value = "None" }
|
||||
|
||||
[structures.flow]
|
||||
scale = [ 1e-5, 1e-5, 1e-5 ]
|
||||
|
||||
transportProperties.nu = 1e-6
|
||||
|
||||
pressure.boundaryField.inlet = { type = "fixedValue", value = 1e-3 }
|
||||
pressure.boundaryField.outlet = { type = "fixedValue", value = 0.0 }
|
||||
|
||||
velocity.boundaryField.inlet = { type = "pressureInletVelocity", value = 0.0 }
|
||||
velocity.boundaryField.outlet = { type = "zeroGradient", value = "None" }
|
||||
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user