L-Nafaryus/anisotropy
L-Nafaryus/anisotropy
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anisotropy/logs/anisotrope.2.log

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CRITICAL: Missed environment
INFO: --------------------------------------------------------------------------------
INFO: main:
task: 1 / 84
cpu count: 4
structure: simple
direction: [1, 0, 0]
theta: 0.01
fillet: False
export: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.01
INFO: salome: ['start', '--shutdown-servers=1', '--port', '2810', '-t']
INFO: enviroment:
Python 3.9.4
Salome 9.6.0
OpenFOAM-v2012
INFO: --------------------------------------------------------------------------------
INFO: main:
task: 1 / 84
cpu count: 4
structure: simple
direction: [1, 0, 0]
theta: 0.01
fillet: False
export: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.01
INFO: salome: ['start', '--shutdown-servers=1', '--port', '2810', '-t']
INFO: genMesh:
structure type: simple
coefficient: 0.01
fillet: 0
flow direction: [1, 0, 0]
export path: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.01/mesh.unv
INFO: shape:
edges length: 60.95122652608073
surface area: 37.90423023682059
volume: 7.369852937284071
INFO: meshCreate:
fineness: Coarse
min size: 0.005
max size: 0.05
growth rate: 0.5
nb segs per edge: 0.5
nb segs per radius: 1.5
limit size by surface curvature: True
quad-dominated: False
second order: False
optimize: True
INFO: meshCreate:
viscous layers:
thickness: 0.005
number: 2
stretch factor: 1.2
INFO: meshCompute:
Elements: 332036
Edges: 1212
Faces: 31402
Triangles: 31402
Volumes: 299422
Tetrahedrons: 244554
Prisms: 54868
Pyramid: 0
INFO: meshExport:
format: unv
INFO: createMesh: elapsed time: 0:00:56.351503
INFO: ideasUnvToFoam: ['mesh.unv']
INFO: createPatch: ['-overwrite', '-dict', 'system/createPatchDict.symetry']
INFO: checkMesh: ['-allGeometry', '-allTopology']
WARNING: checkMesh:
Cells with small determinant (< 0.001) found, number of cells: 1129
Faces with small interpolation weight (< 0.05) found, number of faces: 65
INFO: transformPoints: ['-scale', '(1e-05 1e-05 1e-05)']
INFO: decomposePar: []
INFO: renumberMesh: ['-parallel', '-overwrite']
INFO: potentialFoam: ['-parallel']
INFO: foamDictionary: ['processor0/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor0/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor1/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor1/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor2/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor2/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor3/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor3/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: simpleFoam: ['-parallel']
ERROR: simpleFoam:
[3] #0 Foam::error::printStack(Foam::Ostream&) at ??:?
[3] #1 Foam::sigFpe::sigHandler(int) at ??:?
[3] #2 ? in /usr/lib64/libpthread.so.0
[3] #3 Foam::GAMGSolver::scale(Foam::Field<double>&, Foam::Field<double>&, Foam::lduMatrix const&, Foam::FieldField<Foam::Field, double> const&, Foam::UPtrList<Foam::lduInterfaceField const> const&, Foam::Field<double> const&, unsigned char) const at ??:?
[3] #4 Foam::GAMGSolver::Vcycle(Foam::PtrList<Foam::lduMatrix::smoother> const&, Foam::Field<double>&, Foam::Field<double> const&, Foam::Field<double>&, Foam::Field<double>&, Foam::Field<double>&, Foam::Field<double>&, Foam::Field<double>&, Foam::PtrList<Foam::Field<double> >&, Foam::PtrList<Foam::Field<double> >&, unsigned char) const at ??:?
[3] #5 Foam::GAMGSolver::solve(Foam::Field<double>&, Foam::Field<double> const&, unsigned char) const at ??:?
[3] #6 Foam::fvMatrix<double>::solveSegregated(Foam::dictionary const&) at ??:?
[3] #7 Foam::fvMatrix<double>::solveSegregatedOrCoupled(Foam::dictionary const&) at ??:?
[3] #8 Foam::fvMesh::solve(Foam::fvMatrix<double>&, Foam::dictionary const&) const at ??:?
[3] #9 ? in ~/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/bin/simpleFoam
[3] #10 __libc_start_main in /usr/lib64/libc.so.6
[3] #11 ? in ~/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/bin/simpleFoam
[elnafo:22022] *** Process received signal ***
[elnafo:22022] Signal: Floating point exception (8)
[elnafo:22022] Signal code: (-6)
[elnafo:22022] Failing at address: 0x3e800005606
[elnafo:22022] [ 0] /usr/lib64/libpthread.so.0(+0x13900)[0x7f628c2a3900]
[elnafo:22022] [ 1] /usr/lib64/libpthread.so.0(raise+0x141)[0x7f628c2a37a1]
[elnafo:22022] [ 2] /usr/lib64/libpthread.so.0(+0x13900)[0x7f628c2a3900]
[elnafo:22022] [ 3] /home/nafaryus/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZNK4Foam10GAMGSolver5scaleERNS_5FieldIdEES3_RKNS_9lduMatrixERKNS_10FieldFieldIS1_dEERKNS_8UPtrListIKNS_17lduInterfaceFieldEEERKS2_h+0xee)[0x7f628ccd67ee]
[elnafo:22022] [ 4] /home/nafaryus/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZNK4Foam10GAMGSolver6VcycleERKNS_7PtrListINS_9lduMatrix8smootherEEERNS_5FieldIdEERKS8_S9_S9_S9_S9_S9_RNS1_IS8_EESD_h+0x9b9)[0x7f628ccd85c9]
[elnafo:22022] [ 5] /home/nafaryus/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/lib/libOpenFOAM.so(_ZNK4Foam10GAMGSolver5solveERNS_5FieldIdEERKS2_h+0x60b)[0x7f628ccda76b]
[elnafo:22022] [ 6] /home/nafaryus/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/lib/libfiniteVolume.so(_ZN4Foam8fvMatrixIdE15solveSegregatedERKNS_10dictionaryE+0x18b)[0x7f628ff9c49b]
[elnafo:22022] [ 7] /home/nafaryus/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/lib/libfiniteVolume.so(_ZN4Foam8fvMatrixIdE24solveSegregatedOrCoupledERKNS_10dictionaryE+0x44b)[0x7f628f473d7b]
[elnafo:22022] [ 8] /home/nafaryus/programs/OpenFOAM/OpenFOAM-v2012/platforms/linux64GccDPInt32Opt/lib/libfiniteVolume.so(_ZNK4Foam6fvMesh5solveERNS_8fvMatrixIdEERKNS_10dictionaryE+0x24)[0x7f628f418864]
[elnafo:22022] [ 9] simpleFoam(+0x272da)[0x55b38a1bc2da]
[elnafo:22022] [10] /usr/lib64/libc.so.6(__libc_start_main+0xea)[0x7f628c0f1e0a]
[elnafo:22022] [11] simpleFoam(+0x2872a)[0x55b38a1bd72a]
[elnafo:22022] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 3 with PID 0 on node elnafo exited on signal 8 (Floating point exception).
--------------------------------------------------------------------------
INFO: calculate: elapsed time: 0:00:55.554469
INFO: --------------------------------------------------------------------------------
INFO: main:
task: 2 / 84
cpu count: 4
structure: simple
direction: [1, 0, 0]
theta: 0.02
fillet: False
export: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.02
INFO: salome: ['start', '--shutdown-servers=1', '--port', '2810', '-t']
INFO: genMesh:
structure type: simple
coefficient: 0.02
fillet: 0
flow direction: [1, 0, 0]
export path: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.02/mesh.unv
INFO: shape:
edges length: 60.21103447685668
surface area: 37.190152146750385
volume: 7.114882727707145
INFO: meshCreate:
fineness: Coarse
min size: 0.005
max size: 0.05
growth rate: 0.5
nb segs per edge: 0.5
nb segs per radius: 1.5
limit size by surface curvature: True
quad-dominated: False
second order: False
optimize: True
INFO: meshCreate:
viscous layers:
thickness: 0.005
number: 2
stretch factor: 1.2
INFO: meshCompute:
Elements: 322995
Edges: 1204
Faces: 30602
Triangles: 30602
Volumes: 291189
Tetrahedrons: 237773
Prisms: 53416
Pyramid: 0
INFO: meshExport:
format: unv
INFO: createMesh: elapsed time: 0:00:53.272977
INFO: ideasUnvToFoam: ['mesh.unv']
INFO: createPatch: ['-overwrite', '-dict', 'system/createPatchDict.symetry']
INFO: checkMesh: ['-allGeometry', '-allTopology']
WARNING: checkMesh:
Cells with small determinant (< 0.001) found, number of cells: 384
Faces with small interpolation weight (< 0.05) found, number of faces: 316
INFO: transformPoints: ['-scale', '(1e-05 1e-05 1e-05)']
INFO: decomposePar: []
INFO: renumberMesh: ['-parallel', '-overwrite']
INFO: potentialFoam: ['-parallel']
INFO: foamDictionary: ['processor0/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor0/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor1/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor1/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor2/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor2/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor3/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor3/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: simpleFoam: ['-parallel']
CRITICAL: Missed environment
INFO: --------------------------------------------------------------------------------
INFO: main:
task: 1 / 84
cpu count: 4
structure: simple
direction: [1, 0, 0]
theta: 0.01
fillet: True
export: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.01
INFO: salome: ['start', '--shutdown-servers=1', '--port', '2810', '-t']
INFO: genMesh:
structure type: simple
coefficient: 0.01
fillet: 1
flow direction: [1, 0, 0]
export path: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.01/mesh.unv
INFO: shape:
edges length: 67.92273385609434
surface area: 37.44945519567929
volume: 7.368042673884656
INFO: meshCreate:
fineness: Coarse
min size: 0.005
max size: 0.05
growth rate: 0.5
nb segs per edge: 0.5
nb segs per radius: 1.5
limit size by surface curvature: True
quad-dominated: False
second order: False
optimize: True
INFO: meshCreate:
viscous layers:
thickness: 0.005
number: 2
stretch factor: 1.2
INFO: environment:
Python 3.9.4
Salome 9.6.0
OpenFOAM-v2012
INFO: environment:
Python 3.9.4
Salome 9.6.0
OpenFOAM-v2012
INFO: --------------------------------------------------------------------------------
INFO: main:
task: 1 / 84
cpu count: 4
structure: simple
direction: [1, 0, 0]
theta: 0.01
fillet: True
export: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.01
INFO: salome: ['start', '--shutdown-servers=1', '--port', '2810', '-t']
INFO: genMesh:
structure type: simple
coefficient: 0.01
fillet: 1
flow direction: [1, 0, 0]
export path: /home/nafaryus/.vault/projects/anisotrope-cube/build/simple/direction-100/theta-0.01/mesh.unv
INFO: shape:
edges length: 67.92273385609434
surface area: 37.44945519567929
volume: 7.368042673884656
INFO: meshCreate:
fineness: Coarse
min size: 0.005
max size: 0.05
growth rate: 0.5
nb segs per edge: 0.5
nb segs per radius: 1.5
limit size by surface curvature: True
quad-dominated: False
second order: False
optimize: True
INFO: meshCreate:
viscous layers:
thickness: 0.005
number: 2
stretch factor: 1.2
INFO: meshCompute:
Elements: 478430
Edges: 3956
Faces: 61270
Triangles: 61270
Volumes: 413204
Tetrahedrons: 298712
Prisms: 114492
Pyramid: 0
INFO: meshExport:
format: unv
INFO: createMesh: elapsed time: 0:02:13.757935
INFO: ideasUnvToFoam: ['mesh.unv']
INFO: createPatch: ['-overwrite', '-dict', 'system/createPatchDict.symetry']
INFO: checkMesh: ['-allGeometry', '-allTopology']
WARNING: checkMesh:
Cells with small determinant (< 0.001) found, number of cells: 77
Concave cells (using face planes) found, number of cells: 3
Faces with small interpolation weight (< 0.05) found, number of faces: 128
Faces with small volume ratio (< 0.01) found, number of faces: 2
INFO: transformPoints: ['-scale', '(1e-05 1e-05 1e-05)']
INFO: decomposePar: []
INFO: renumberMesh: ['-parallel', '-overwrite']
INFO: potentialFoam: ['-parallel']
INFO: foamDictionary: ['processor0/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor0/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor1/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor1/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor2/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor2/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: foamDictionary: ['processor3/0/U', '-entry', 'boundaryField.inlet.type', '-set', 'pressureInletVelocity']
INFO: foamDictionary: ['processor3/0/U', '-entry', 'boundaryField.inlet.value', '-set', 'uniform (0 0 0)']
INFO: simpleFoam: ['-parallel']
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