2009-01-26 00:37:14 +05:00
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#ifdef PARALLEL
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#include <meshing.hpp>
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#include "paralleltop.hpp"
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namespace netgen
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{
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2011-07-15 03:36:19 +06:00
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static MPI_Group MPI_HIGHORDER_WORLD;
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static MPI_Comm MPI_HIGHORDER_COMM;
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void MyMPI_ExchangeTable (TABLE<int> & send_verts,
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TABLE<int> & recv_verts, int tag,
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MPI_Comm comm = MPI_COMM_WORLD)
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{
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int ntasks, rank;
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MPI_Comm_size(comm, &ntasks);
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MPI_Comm_rank(comm, &rank);
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Array<MPI_Request> requests;
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for (int dest = 0; dest < ntasks; dest++)
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if (dest != rank)
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requests.Append (MyMPI_ISend (send_verts[dest], dest, tag, comm));
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for (int i = 0; i < ntasks-1; i++)
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{
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MPI_Status status;
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MPI_Probe (MPI_ANY_SOURCE, tag, comm, &status);
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int size, src = status.MPI_SOURCE;
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MPI_Get_count (&status, MPI_INT, &size);
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recv_verts.SetEntrySize (src, size, sizeof(int));
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requests.Append (MyMPI_IRecv (recv_verts[src], src, tag, comm));
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}
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MPI_Waitall (requests.Size(), &requests[0], MPI_STATUS_IGNORE);
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}
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2009-01-26 00:37:14 +05:00
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2011-07-04 18:29:02 +06:00
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2009-01-26 00:37:14 +05:00
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void ParallelMeshTopology :: Reset ()
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{
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*testout << "ParallelMeshTopology::Reset" << endl;
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if ( ntasks == 1 ) return;
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int nvold = nv;
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ne = mesh.GetNE();
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nv = mesh.GetNV();
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nseg = mesh.GetNSeg();
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nsurfel = mesh.GetNSE();
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ned = mesh.GetTopology().GetNEdges();
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nfa = mesh.GetTopology().GetNFaces();
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loc2distedge.ChangeSize (ned);
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for (int i = 0; i < ned; i++)
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if (loc2distedge[i].Size() == 0)
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loc2distedge.Add (i, -1); // will be the global nr
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loc2distface.ChangeSize (nfa);
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for (int i = 0; i < nfa; i++)
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if (loc2distface[i].Size() == 0)
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loc2distface.Add (i, -1); // will be the global nr
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2011-02-15 21:22:05 +05:00
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if ( nvold == nv ) return;
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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SetNV(nv);
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SetNE(ne);
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}
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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ParallelMeshTopology :: ~ParallelMeshTopology ()
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{
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2011-07-15 03:36:19 +06:00
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;
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2011-02-15 21:22:05 +05:00
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}
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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ParallelMeshTopology :: ParallelMeshTopology ( const netgen::Mesh & amesh )
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: mesh(amesh)
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{
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2011-07-15 03:36:19 +06:00
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ned = 0;
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nfa = 0;
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2011-02-15 21:22:05 +05:00
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nv = 0;
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ne = 0;
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np = 0;
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nseg = 0;
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nsurfel = 0;
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neglob = 0;
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nvglob = 0;
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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nparel = 0;
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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coarseupdate = 0;
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2011-07-15 03:36:19 +06:00
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/*
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2011-02-15 21:22:05 +05:00
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isghostedge.SetSize(0);
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isghostface.SetSize(0);
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2011-07-15 03:36:19 +06:00
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*/
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// overlap = 0;
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2011-02-15 21:22:05 +05:00
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}
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2009-01-26 00:37:14 +05:00
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2011-07-15 03:36:19 +06:00
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int ParallelMeshTopology :: Glob2Loc_Vert (int globnum)
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2009-01-26 00:37:14 +05:00
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{
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for (int i = 1; i <= nv; i++)
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if ( globnum == loc2distvert[i][0] )
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return i;
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return -1;
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: Glob2Loc_VolEl (int globnum )
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{
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int locnum = -1;
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for (int i = 0; i < ne; i++)
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2011-07-15 03:36:19 +06:00
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if ( globnum == loc2distel[i][0] )
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locnum = i+1;
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2011-02-15 21:22:05 +05:00
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return locnum;
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}
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: Glob2Loc_SurfEl (int globnum )
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2009-01-26 00:37:14 +05:00
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{
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int locnum = -1;
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for (int i = 0; i < nsurfel; i++)
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2011-07-15 03:36:19 +06:00
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if ( globnum == loc2distsurfel[i][0] )
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locnum = i+1;
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2009-01-26 00:37:14 +05:00
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return locnum;
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: Glob2Loc_Segm (int globnum )
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2009-01-26 00:37:14 +05:00
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{
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int locnum = -1;
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for (int i = 0; i < nseg; i++)
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2011-07-15 03:36:19 +06:00
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if ( globnum == loc2distsegm[i][0] )
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locnum = i+1;
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2009-01-26 00:37:14 +05:00
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return locnum;
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}
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void ParallelMeshTopology :: Print() const
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{
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2011-02-15 21:22:05 +05:00
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(*testout) << endl << "TOPOLOGY FOR PARALLEL MESHES" << endl << endl;
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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for ( int i = 1; i <= nv; i++ )
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if ( IsExchangeVert (i) )
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{
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(*testout) << "exchange point " << i << ": global " << GetLoc2Glob_Vert(i) << endl;
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for ( int dest = 0; dest < ntasks; dest ++)
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if ( dest != id )
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2009-01-26 00:37:14 +05:00
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if ( GetDistantPNum( dest, i ) > 0 )
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(*testout) << " p" << dest << ": " << GetDistantPNum ( dest, i ) << endl;
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2011-02-15 21:22:05 +05:00
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}
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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for ( int i = 1; i <= ned; i++ )
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if ( IsExchangeEdge ( i ) )
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{
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int v1, v2;
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mesh . GetTopology().GetEdgeVertices(i, v1, v2);
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(*testout) << "exchange edge " << i << ": global vertices " << GetLoc2Glob_Vert(v1) << " "
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<< GetLoc2Glob_Vert(v2) << endl;
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for ( int dest = 0; dest < ntasks; dest++)
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if ( GetDistantEdgeNum ( dest, i ) > 0 )
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if ( dest != id )
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2011-07-15 03:36:19 +06:00
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(*testout) << " p" << dest << ": " << GetDistantEdgeNum ( dest, i ) << endl;
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2011-02-15 21:22:05 +05:00
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}
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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for ( int i = 1; i <= nfa; i++ )
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if ( IsExchangeFace(i) )
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{
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Array<int> facevert;
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mesh . GetTopology().GetFaceVertices(i, facevert);
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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(*testout) << "exchange face " << i << ": global vertices " ;
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for ( int fi=0; fi < facevert.Size(); fi++)
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(*testout) << GetLoc2Glob_Vert(facevert[fi]) << " ";
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(*testout) << endl;
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for ( int dest = 0; dest < ntasks; dest++)
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if ( dest != id )
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2009-01-26 00:37:14 +05:00
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{
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if ( GetDistantFaceNum ( dest, i ) >= 0 )
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2011-02-15 21:22:05 +05:00
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(*testout) << " p" << dest << ": " << GetDistantFaceNum ( dest, i ) << endl;
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2009-01-26 00:37:14 +05:00
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}
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2011-02-15 21:22:05 +05:00
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}
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2009-01-26 00:37:14 +05:00
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2011-07-15 03:36:19 +06:00
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/*
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2011-02-15 21:22:05 +05:00
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for ( int i = 1; i < mesh.GetNE(); i++)
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{
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if ( !IsExchangeElement(i) ) continue;
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Array<int> vert;
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const Element & el = mesh.VolumeElement(i);
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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(*testout) << "parallel local element " << i << endl;
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2009-01-26 00:37:14 +05:00
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2011-02-15 21:22:05 +05:00
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(*testout) << "vertices " ;
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for ( int j = 0; j < el.GetNV(); j++)
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(*testout) << el.PNum(j+1) << " ";
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(*testout) << "is ghost " << IsGhostEl(i) << endl;
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(*testout) << endl;
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}
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2011-07-15 03:36:19 +06:00
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*/
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2009-01-26 00:37:14 +05:00
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantPNum ( int proc, int locpnum ) const
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2009-01-26 00:37:14 +05:00
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{
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if ( proc == 0 )
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return loc2distvert[locpnum][0];
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for (int i = 1; i < loc2distvert[locpnum].Size(); i += 2)
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if ( loc2distvert[locpnum][i] == proc )
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return loc2distvert[locpnum][i+1];
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return -1;
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantFaceNum ( int proc, int locfacenum ) const
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2009-01-26 00:37:14 +05:00
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{
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if ( proc == 0 )
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return loc2distface[locfacenum-1][0];
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for ( int i = 1; i < loc2distface[locfacenum-1].Size(); i+=2 )
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if ( loc2distface[locfacenum-1][i] == proc )
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return loc2distface[locfacenum-1][i+1];
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return -1;
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantEdgeNum ( int proc, int locedgenum ) const
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2009-01-26 00:37:14 +05:00
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{
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if ( proc == 0 )
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return loc2distedge[locedgenum-1][0];
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for ( int i = 1; i < loc2distedge[locedgenum-1].Size(); i+=2 )
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if ( loc2distedge[locedgenum-1][i] == proc )
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return loc2distedge[locedgenum-1][i+1];
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return -1;
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantElNum ( int proc, int locelnum ) const
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2009-01-26 00:37:14 +05:00
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{
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if ( proc == 0 )
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return loc2distel[locelnum-1][0];
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for ( int i = 1; i < loc2distel[locelnum-1].Size(); i+=2 )
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if ( loc2distel[locelnum-1][i] == proc )
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return loc2distel[locelnum-1][i+1];
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return -1;
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}
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// gibt anzahl an distant pnums zurueck
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// * pnums entspricht Array<int[2] >
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantPNums ( int locpnum, int * distpnums ) const
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2009-01-26 00:37:14 +05:00
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{
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distpnums[0] = 0;
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distpnums[1] = loc2distvert[locpnum][0];
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for ( int i = 1; i < loc2distvert[locpnum].Size(); i++ )
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distpnums[i+1] = loc2distvert[locpnum][i];
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2011-02-15 21:22:05 +05:00
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int size = loc2distvert[locpnum].Size() / 2 + 1;
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return size;
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2009-01-26 00:37:14 +05:00
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantFaceNums ( int locfacenum, int * distfacenums ) const
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2009-01-26 00:37:14 +05:00
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{
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distfacenums[0] = 0;
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distfacenums[1] = loc2distface[locfacenum-1][0];
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for ( int i = 1; i < loc2distface[locfacenum-1].Size(); i++ )
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distfacenums[i+1] = loc2distface[locfacenum-1][i];
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int size = loc2distface[locfacenum-1].Size() / 2 + 1;
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return size;
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantEdgeNums ( int locedgenum, int * distedgenums ) const
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2009-01-26 00:37:14 +05:00
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{
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distedgenums[0] = 0;
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distedgenums[1] = loc2distedge[locedgenum-1][0];
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for ( int i = 1; i < loc2distedge[locedgenum-1].Size(); i++ )
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distedgenums[i+1] = loc2distedge[locedgenum-1][i];
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int size = loc2distedge[locedgenum-1].Size() / 2 + 1;
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return size;
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}
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2011-02-15 21:22:05 +05:00
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int ParallelMeshTopology :: GetDistantElNums ( int locelnum, int * distelnums ) const
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2009-01-26 00:37:14 +05:00
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{
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distelnums[0] = 0;
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distelnums[1] = loc2distel[locelnum-1][0];
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for ( int i = 1; i < loc2distel[locelnum-1].Size(); i++ )
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distelnums[i+1] = loc2distel[locelnum-1][i];
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int size = loc2distel[locelnum-1].Size() / 2 + 1;
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return size;
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}
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void ParallelMeshTopology :: SetDistantFaceNum ( int dest, int locnum, int distnum )
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{
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if ( dest == 0 )
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|
|
|
{
|
|
|
|
loc2distface[locnum-1][0] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
for ( int i = 1; i < loc2distface[locnum-1].Size(); i+=2 )
|
|
|
|
if ( loc2distface[locnum-1][i] == dest )
|
|
|
|
{
|
|
|
|
loc2distface[locnum-1][i+1] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
loc2distface.Add(locnum-1, dest);
|
|
|
|
loc2distface.Add(locnum-1, distnum);
|
|
|
|
}
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: SetDistantPNum ( int dest, int locnum, int distnum )
|
|
|
|
{
|
|
|
|
if ( dest == 0 )
|
|
|
|
{
|
|
|
|
loc2distvert[locnum][0] = distnum; // HERE
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
for ( int i = 1; i < loc2distvert[locnum].Size(); i+=2 )
|
|
|
|
if ( loc2distvert[locnum][i] == dest )
|
|
|
|
{
|
|
|
|
loc2distvert[locnum][i+1] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
loc2distvert.Add (locnum, dest);
|
|
|
|
loc2distvert.Add (locnum, distnum);
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: SetDistantEdgeNum ( int dest, int locnum, int distnum )
|
|
|
|
{
|
|
|
|
if ( dest == 0 )
|
|
|
|
{
|
|
|
|
loc2distedge[locnum-1][0] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
for ( int i = 1; i < loc2distedge[locnum-1].Size(); i+=2 )
|
|
|
|
if ( loc2distedge[locnum-1][i] == dest )
|
|
|
|
{
|
|
|
|
loc2distedge[locnum-1][i+1] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
loc2distedge.Add (locnum-1, dest);
|
|
|
|
loc2distedge.Add (locnum-1, distnum);
|
|
|
|
}
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: SetDistantEl ( int dest, int locnum, int distnum )
|
|
|
|
{
|
|
|
|
if ( dest == 0 )
|
|
|
|
{
|
|
|
|
loc2distel[locnum-1][0] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
for ( int i = 1; i < loc2distel[locnum-1].Size(); i+=2 )
|
|
|
|
if ( loc2distel[locnum-1][i] == dest )
|
|
|
|
{
|
|
|
|
loc2distel[locnum-1][i+1] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
loc2distel.Add (locnum-1, dest);
|
|
|
|
loc2distel.Add (locnum-1, distnum);
|
|
|
|
}
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: SetDistantSurfEl ( int dest, int locnum, int distnum )
|
|
|
|
{
|
2011-02-15 21:22:05 +05:00
|
|
|
if ( dest == 0 )
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
|
|
|
loc2distsurfel[locnum-1][0] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int i = 1; i < loc2distsurfel[locnum-1].Size(); i+=2 )
|
2009-01-26 00:37:14 +05:00
|
|
|
if ( loc2distsurfel[locnum-1][i] == dest )
|
|
|
|
{
|
|
|
|
loc2distsurfel[locnum-1][i+1] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
loc2distsurfel.Add (locnum-1, dest);
|
|
|
|
loc2distsurfel.Add (locnum-1, distnum);
|
|
|
|
}
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: SetDistantSegm ( int dest, int locnum, int distnum )
|
|
|
|
{
|
|
|
|
if ( dest == 0 )
|
|
|
|
{
|
|
|
|
loc2distsegm[locnum-1][0] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
for (int i = 1; i < loc2distsegm[locnum-1].Size(); i+=2 )
|
|
|
|
if ( loc2distsegm[locnum-1][i] == dest )
|
|
|
|
{
|
|
|
|
loc2distsegm[locnum-1][i+1] = distnum;
|
|
|
|
return;
|
|
|
|
}
|
|
|
|
|
|
|
|
loc2distsegm.Add (locnum-1, dest);
|
|
|
|
loc2distsegm.Add (locnum-1, distnum);
|
|
|
|
}
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: GetVertNeighbours ( int vnum, Array<int> & dests ) const
|
|
|
|
{
|
|
|
|
dests.SetSize(0);
|
|
|
|
int i = 1;
|
|
|
|
while ( i < loc2distvert[vnum].Size() )
|
|
|
|
{
|
|
|
|
dests.Append ( loc2distvert[vnum][i] );
|
|
|
|
i+=2;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: Update ()
|
|
|
|
{
|
|
|
|
ne = mesh.GetNE();
|
|
|
|
nv = mesh.GetNV();
|
|
|
|
nseg = mesh.GetNSeg();
|
|
|
|
nsurfel = mesh.GetNSE();
|
|
|
|
|
|
|
|
ned = mesh.GetTopology().GetNEdges();
|
|
|
|
nfa = mesh.GetTopology().GetNFaces();
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
void ParallelMeshTopology :: UpdateRefinement ()
|
|
|
|
{
|
2011-07-15 03:36:19 +06:00
|
|
|
;
|
2011-02-15 21:22:05 +05:00
|
|
|
}
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
void ParallelMeshTopology :: UpdateCoarseGridGlobal ()
|
|
|
|
{
|
2011-07-15 03:36:19 +06:00
|
|
|
if (id == 0)
|
|
|
|
PrintMessage ( 3, "UPDATE GLOBAL COARSEGRID STARTS" ); // JS
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-07-04 18:29:02 +06:00
|
|
|
MPI_Group MPI_GROUP_WORLD;
|
|
|
|
|
|
|
|
int n_ho = netgen::ntasks - 1;
|
|
|
|
int * process_ranks = new int[netgen::ntasks-1];
|
|
|
|
for ( int i = 0; i < netgen::ntasks-1; i++ )
|
|
|
|
process_ranks[i] = i+1;
|
|
|
|
|
|
|
|
MPI_Comm_group ( MPI_COMM_WORLD, &MPI_GROUP_WORLD);
|
|
|
|
MPI_Group_incl ( MPI_GROUP_WORLD, n_ho, process_ranks, & MPI_HIGHORDER_WORLD);
|
|
|
|
MPI_Comm_create ( MPI_COMM_WORLD, MPI_HIGHORDER_WORLD, & MPI_HIGHORDER_COMM);
|
|
|
|
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
int timer = NgProfiler::CreateTimer ("UpdateCoarseGridGlobal");
|
|
|
|
NgProfiler::RegionTimer reg(timer);
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
*testout << "ParallelMeshTopology :: UpdateCoarseGridGlobal" << endl;
|
|
|
|
const MeshTopology & topology = mesh.GetTopology();
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
Array<int> sendarray, recvarray;
|
|
|
|
|
|
|
|
nfa = topology . GetNFaces();
|
|
|
|
ned = topology . GetNEdges();
|
|
|
|
np = mesh . GetNP();
|
|
|
|
nv = mesh . GetNV();
|
|
|
|
ne = mesh . GetNE();
|
|
|
|
nseg = mesh.GetNSeg();
|
|
|
|
nsurfel = mesh.GetNSE();
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
// low order processor - save mesh partition
|
|
|
|
if ( id == 0 )
|
|
|
|
{
|
|
|
|
for ( int eli = 1; eli <= ne; eli++ )
|
2011-07-15 03:36:19 +06:00
|
|
|
loc2distel[eli-1][0] = eli;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int i = 1; i <= mesh .GetNV(); i++)
|
|
|
|
loc2distvert[i][0] = i;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int i = 0; i < mesh . GetNSeg(); i++)
|
|
|
|
loc2distsegm[i][0] = i+1;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int i = 0; i < mesh . GetNSE(); i++)
|
|
|
|
loc2distsurfel[i][0] = i+1;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int i = 0; i < topology .GetNEdges(); i++)
|
|
|
|
loc2distedge[i][0] = i+1;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int i = 0; i < topology .GetNFaces(); i++)
|
|
|
|
loc2distface[i][0] = i+1;
|
|
|
|
}
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
|
|
|
if ( id == 0 )
|
|
|
|
sendarray.Append (nfa);
|
|
|
|
|
|
|
|
BitArray recvface(nfa);
|
|
|
|
recvface.Clear();
|
|
|
|
|
|
|
|
/*
|
2011-02-15 21:22:05 +05:00
|
|
|
Array<int> edges, pnums, faces;
|
|
|
|
for ( int el = 1; el <= ne; el++ )
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
2011-02-15 21:22:05 +05:00
|
|
|
topology.GetElementFaces (el, faces);
|
|
|
|
int globeli = GetLoc2Glob_VolEl(el);
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int fai = 0; fai < faces.Size(); fai++)
|
|
|
|
{
|
|
|
|
int fa = faces[fai];
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
topology.GetElementEdges ( el, edges );
|
|
|
|
topology.GetFaceVertices ( fa, pnums );
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
// send :
|
|
|
|
// localfacenum
|
|
|
|
// np
|
|
|
|
// ned
|
|
|
|
// globalpnums
|
|
|
|
// localpnums
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
// localedgenums mit globalv1, globalv2
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
sendarray. Append ( fa );
|
|
|
|
sendarray. Append ( globeli );
|
|
|
|
sendarray. Append ( pnums.Size() );
|
|
|
|
sendarray. Append ( edges.Size() );
|
|
|
|
|
|
|
|
if (id == 0)
|
|
|
|
for ( int i = 0; i < pnums.Size(); i++ )
|
|
|
|
sendarray. Append( pnums[i] );
|
|
|
|
else
|
|
|
|
for ( int i = 0; i < pnums.Size(); i++ )
|
|
|
|
sendarray. Append( GetLoc2Glob_Vert(pnums[i]) );
|
|
|
|
|
|
|
|
for ( int i = 0; i < pnums.Size(); i++ )
|
|
|
|
sendarray. Append(pnums[i] );
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for ( int i = 0; i < edges.Size(); i++ )
|
|
|
|
{
|
|
|
|
sendarray. Append(edges[i] );
|
|
|
|
int v1, v2;
|
|
|
|
topology . GetEdgeVertices ( edges[i], v1, v2 );
|
|
|
|
int dv1 = GetLoc2Glob_Vert ( v1 );
|
|
|
|
int dv2 = GetLoc2Glob_Vert ( v2 );
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
if (id > 0) if ( dv1 > dv2 ) swap ( dv1, dv2 );
|
|
|
|
sendarray . Append ( dv1 );
|
|
|
|
sendarray . Append ( dv2 );
|
|
|
|
}
|
|
|
|
}
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
*/
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
// new version
|
2009-01-26 00:37:14 +05:00
|
|
|
Array<int> edges, pnums, faces, elpnums;
|
|
|
|
sendarray.Append (ne);
|
|
|
|
for ( int el = 1; el <= ne; el++ )
|
|
|
|
{
|
|
|
|
topology.GetElementFaces (el, faces);
|
|
|
|
topology.GetElementEdges ( el, edges );
|
|
|
|
const Element & volel = mesh.VolumeElement (el);
|
|
|
|
|
|
|
|
int globeli = GetLoc2Glob_VolEl(el);
|
|
|
|
|
|
|
|
sendarray. Append ( globeli );
|
|
|
|
sendarray. Append ( faces.Size() );
|
|
|
|
sendarray. Append ( edges.Size() );
|
|
|
|
sendarray. Append ( volel.GetNP() );
|
|
|
|
|
|
|
|
for ( int i = 0; i < faces.Size(); i++ )
|
|
|
|
sendarray. Append(faces[i] );
|
|
|
|
for ( int i = 0; i < edges.Size(); i++ )
|
|
|
|
sendarray. Append(edges[i] );
|
|
|
|
|
|
|
|
for ( int i = 0; i < volel.GetNP(); i++ )
|
|
|
|
if (id == 0)
|
|
|
|
sendarray. Append(volel[i] );
|
|
|
|
else
|
|
|
|
sendarray. Append(GetLoc2Glob_Vert (volel[i]));
|
|
|
|
}
|
|
|
|
// end new version
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
BitArray edgeisinit(ned), vertisinit(np);
|
|
|
|
edgeisinit.Clear();
|
|
|
|
vertisinit.Clear();
|
|
|
|
|
|
|
|
// Array for temporary use, to find local from global element fast
|
|
|
|
Array<int,1> glob2loc_el;
|
|
|
|
if ( id != 0 )
|
|
|
|
{
|
|
|
|
glob2loc_el.SetSize (neglob);
|
|
|
|
glob2loc_el = -1;
|
|
|
|
for ( int locel = 1; locel <= mesh.GetNE(); locel++)
|
|
|
|
glob2loc_el[GetLoc2Glob_VolEl(locel)] = locel;
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
// MPI_Barrier (MPI_COMM_WORLD);
|
|
|
|
|
|
|
|
MPI_Request sendrequest;
|
|
|
|
|
|
|
|
if (id == 0)
|
|
|
|
{
|
2011-07-15 03:36:19 +06:00
|
|
|
// PrintMessage (4, "UpdateCoarseGridGlobal : bcast, size = ", int (sendarray.Size()*sizeof(int)) );
|
2009-01-26 00:37:14 +05:00
|
|
|
MyMPI_Bcast ( sendarray );
|
|
|
|
}
|
|
|
|
else
|
2011-07-15 03:36:19 +06:00
|
|
|
sendrequest = MyMPI_ISend ( sendarray, 0, MPI_TAG_MESH );
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
|
|
|
int nloops = (id == 0) ? ntasks-1 : 1;
|
|
|
|
for (int hi = 0; hi < nloops; hi++)
|
|
|
|
{
|
|
|
|
int sender;
|
|
|
|
|
|
|
|
if (id == 0)
|
|
|
|
{
|
2011-07-07 03:08:58 +06:00
|
|
|
sender = MyMPI_Recv ( recvarray, MPI_TAG_MESH );
|
2011-07-15 03:36:19 +06:00
|
|
|
// PrintMessage (4, "have received from ", sender);
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
else
|
|
|
|
{
|
|
|
|
MyMPI_Bcast ( recvarray );
|
|
|
|
sender = 0;
|
|
|
|
}
|
|
|
|
|
|
|
|
// compare received vertices with own ones
|
|
|
|
int ii = 0;
|
2011-06-26 13:42:55 +06:00
|
|
|
// int cntel = 0;
|
2009-01-26 00:37:14 +05:00
|
|
|
int volel = 1;
|
|
|
|
|
|
|
|
if ( id != 0 )
|
|
|
|
nfaglob = recvarray[ii++];
|
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
if (id == 0) continue;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
Array<int> faces, edges;
|
|
|
|
Array<int> pnums, globalpnums;
|
|
|
|
|
|
|
|
int recv_ne = recvarray[ii++];
|
|
|
|
for (int hi = 0; hi < recv_ne; hi++)
|
|
|
|
{
|
|
|
|
int globvolel = recvarray[ii++];
|
|
|
|
int distnfa = recvarray[ii++];
|
|
|
|
int distned = recvarray[ii++];
|
|
|
|
int distnp = recvarray[ii++];
|
|
|
|
|
|
|
|
if ( id > 0 )
|
|
|
|
volel = glob2loc_el[globvolel];
|
|
|
|
else
|
|
|
|
volel = globvolel;
|
|
|
|
|
|
|
|
if (volel != -1)
|
|
|
|
{
|
|
|
|
topology.GetElementFaces( volel, faces);
|
|
|
|
topology.GetElementEdges ( volel, edges);
|
|
|
|
const Element & volelement = mesh.VolumeElement (volel);
|
|
|
|
|
|
|
|
for ( int i = 0; i < faces.Size(); i++)
|
|
|
|
SetDistantFaceNum ( sender, faces[i], recvarray[ii++]);
|
|
|
|
|
|
|
|
for ( int i = 0; i < edges.Size(); i++)
|
|
|
|
SetDistantEdgeNum ( sender, edges[i], recvarray[ii++]);
|
|
|
|
|
|
|
|
for ( int i = 0; i < distnp; i++)
|
|
|
|
SetDistantPNum ( sender, volelement[i], recvarray[ii++]);
|
|
|
|
}
|
|
|
|
else
|
|
|
|
ii += distnfa + distned + distnp;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
coarseupdate = 1;
|
|
|
|
|
|
|
|
if (id != 0)
|
2011-07-15 03:36:19 +06:00
|
|
|
MPI_Wait (&sendrequest, MPI_STATUS_IGNORE);
|
2011-02-15 21:22:05 +05:00
|
|
|
}
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: UpdateCoarseGrid ()
|
|
|
|
{
|
2011-07-15 03:36:19 +06:00
|
|
|
static int timer = NgProfiler::CreateTimer ("UpdateCoarseGrid");
|
2009-01-26 00:37:14 +05:00
|
|
|
NgProfiler::RegionTimer reg(timer);
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
|
2009-01-26 00:37:14 +05:00
|
|
|
(*testout) << "UPDATE COARSE GRID PARALLEL TOPOLOGY " << endl;
|
2011-07-15 03:36:19 +06:00
|
|
|
if (id == 0)
|
|
|
|
PrintMessage (1, "UPDATE COARSE GRID PARALLEL TOPOLOGY ");
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
// find exchange edges - first send exchangeedges locnum, v1, v2
|
|
|
|
// receive distant distnum, v1, v2
|
|
|
|
// find matching
|
|
|
|
const MeshTopology & topology = mesh.GetTopology();
|
|
|
|
|
|
|
|
UpdateCoarseGridGlobal();
|
2011-07-15 03:36:19 +06:00
|
|
|
|
|
|
|
MPI_Barrier (MPI_COMM_WORLD);
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
if ( id == 0 )
|
|
|
|
{
|
|
|
|
MPI_Barrier (MPI_COMM_WORLD);
|
|
|
|
return;
|
|
|
|
}
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
Array<int> sendarray, recvarray;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
nfa = topology . GetNFaces();
|
|
|
|
ned = topology . GetNEdges();
|
|
|
|
np = mesh . GetNP();
|
|
|
|
nv = mesh . GetNV();
|
|
|
|
ne = mesh . GetNE();
|
|
|
|
nseg = mesh.GetNSeg();
|
|
|
|
nsurfel = mesh.GetNSE();
|
|
|
|
|
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
static int timerv = NgProfiler::CreateTimer ("UpdateCoarseGrid - ex vertices");
|
|
|
|
static int timere = NgProfiler::CreateTimer ("UpdateCoarseGrid - ex edges");
|
|
|
|
static int timerf = NgProfiler::CreateTimer ("UpdateCoarseGrid - ex faces");
|
|
|
|
|
|
|
|
|
|
|
|
Array<int,1> glob2loc;
|
|
|
|
Array<int> cnt_send(ntasks-1);
|
|
|
|
|
|
|
|
|
|
|
|
/*
|
2011-02-15 21:22:05 +05:00
|
|
|
// exchange vertices
|
2011-07-15 03:36:19 +06:00
|
|
|
NgProfiler::StartTimer (timerv);
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
*testout << "exchange vertices" << endl;
|
|
|
|
glob2loc.SetSize (nvglob);
|
|
|
|
glob2loc = -1;
|
|
|
|
|
|
|
|
for (int locv = 1; locv <= nv; locv++)
|
|
|
|
if (IsExchangeVert (locv) )
|
|
|
|
glob2loc[GetDistantPNum(0, locv)] = locv;
|
|
|
|
|
|
|
|
|
|
|
|
cnt_send = 0;
|
|
|
|
for (int vertex = 1; vertex <= nv; vertex++)
|
|
|
|
for (int dest = 1; dest < ntasks; dest++)
|
|
|
|
if (IsExchangeVert (dest, vertex))
|
|
|
|
cnt_send[dest-1]+=2;
|
|
|
|
|
|
|
|
// *testout << "cnt_send = " << cnt_send << endl;
|
|
|
|
|
|
|
|
TABLE<int> send_verts(cnt_send);
|
|
|
|
for (int vertex = 1; vertex <= nv; vertex++)
|
|
|
|
for (int dest = 1; dest < ntasks; dest++)
|
|
|
|
if (IsExchangeVert (dest, vertex))
|
|
|
|
{
|
|
|
|
send_verts.Add (dest-1, GetLoc2Glob_Vert (vertex));
|
|
|
|
send_verts.Add (dest-1, vertex);
|
|
|
|
}
|
|
|
|
|
|
|
|
TABLE<int> recv_verts (ntasks-1);
|
|
|
|
MyMPI_ExchangeTable (send_verts, recv_verts, MPI_TAG_MESH+8, MPI_HIGHORDER_COMM);
|
|
|
|
|
|
|
|
for (int sender = 1; sender < ntasks; sender ++)
|
|
|
|
if (id != sender)
|
|
|
|
{
|
|
|
|
FlatArray<int> recvarray = recv_verts[sender-1];
|
|
|
|
for (int ii = 0; ii < recvarray.Size(); )
|
|
|
|
{
|
|
|
|
int globv = recvarray[ii++];
|
|
|
|
int distv = recvarray[ii++];
|
|
|
|
int locv = glob2loc[globv];
|
|
|
|
|
|
|
|
if (locv != -1)
|
|
|
|
{
|
|
|
|
if (GetDistantPNum(sender, locv) != distv)
|
|
|
|
cerr << "distant pnum inconsistent: sender = " << sender << ", locv = "<< locv << ", distv = " << distv << ", getdist = " << GetDistantPNum(sender, locv) << endl;
|
|
|
|
// SetDistantPNum (sender, locv, distv);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
*/
|
|
|
|
|
|
|
|
/*
|
2011-02-15 21:22:05 +05:00
|
|
|
for (int vertex = 1; vertex <= nv; vertex++)
|
|
|
|
if (IsExchangeVert (vertex) )
|
|
|
|
{
|
|
|
|
sendarray.Append (GetLoc2Glob_Vert (vertex));
|
|
|
|
sendarray.Append (vertex);
|
|
|
|
}
|
|
|
|
|
|
|
|
Array<int,1> glob2loc;
|
|
|
|
glob2loc.SetSize (nvglob);
|
|
|
|
glob2loc = -1;
|
|
|
|
|
|
|
|
for (int locv = 1; locv <= nv; locv++)
|
|
|
|
if (IsExchangeVert (locv) )
|
|
|
|
glob2loc[GetDistantPNum(0, locv)] = locv;
|
|
|
|
|
|
|
|
for (int sender = 1; sender < ntasks; sender ++)
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
2011-02-15 21:22:05 +05:00
|
|
|
if (id == sender)
|
|
|
|
MyMPI_Bcast (sendarray, sender-1, MPI_HIGHORDER_COMM);
|
|
|
|
else
|
|
|
|
{
|
|
|
|
MyMPI_Bcast (recvarray, sender-1, MPI_HIGHORDER_COMM);
|
|
|
|
for (int ii = 0; ii < recvarray.Size(); )
|
|
|
|
{
|
|
|
|
int globv = recvarray[ii++];
|
|
|
|
int distv = recvarray[ii++];
|
|
|
|
int locv = glob2loc[globv];
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
if (locv != -1)
|
|
|
|
SetDistantPNum (sender, locv, distv);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
NgProfiler::StopTimer (timerv);
|
|
|
|
*/
|
|
|
|
|
|
|
|
|
|
|
|
NgProfiler::StartTimer (timere);
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
sendarray.SetSize (0);
|
|
|
|
recvarray.SetSize (0);
|
|
|
|
|
|
|
|
|
|
|
|
// exchange edges
|
|
|
|
int maxedge = 0;
|
|
|
|
for (int edge = 1; edge <= ned; edge++)
|
2011-07-15 03:36:19 +06:00
|
|
|
// if (IsExchangeEdge (edge) )
|
2011-02-15 21:22:05 +05:00
|
|
|
{
|
|
|
|
sendarray.Append (GetDistantEdgeNum (0, edge));
|
|
|
|
sendarray.Append (edge);
|
|
|
|
maxedge = max (maxedge, GetDistantEdgeNum (0, edge));
|
|
|
|
}
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
glob2loc.SetSize (maxedge+1);
|
|
|
|
glob2loc = -1;
|
|
|
|
|
|
|
|
for (int loc = 1; loc <= ned; loc++)
|
2011-07-15 03:36:19 +06:00
|
|
|
// if (IsExchangeEdge (loc) )
|
2011-02-15 21:22:05 +05:00
|
|
|
glob2loc[GetDistantEdgeNum(0, loc)] = loc;
|
|
|
|
|
|
|
|
for (int sender = 1; sender < ntasks; sender ++)
|
|
|
|
{
|
|
|
|
if (id == sender)
|
|
|
|
MyMPI_Bcast (sendarray, sender-1, MPI_HIGHORDER_COMM);
|
|
|
|
else
|
|
|
|
{
|
|
|
|
MyMPI_Bcast (recvarray, sender-1, MPI_HIGHORDER_COMM);
|
|
|
|
for (int ii = 0; ii < recvarray.Size(); )
|
|
|
|
{
|
|
|
|
int globe = recvarray[ii++];
|
|
|
|
int diste = recvarray[ii++];
|
|
|
|
|
|
|
|
if (globe > maxedge) continue;
|
|
|
|
int loce = glob2loc[globe];
|
|
|
|
|
|
|
|
if (loce != -1)
|
|
|
|
SetDistantEdgeNum (sender, loce, diste);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
NgProfiler::StopTimer (timere);
|
|
|
|
NgProfiler::StartTimer (timerf);
|
|
|
|
|
|
|
|
glob2loc.SetSize (nfaglob);
|
|
|
|
glob2loc = -1;
|
|
|
|
|
|
|
|
for (int loc = 1; loc <= nfa; loc++)
|
|
|
|
glob2loc[GetDistantFaceNum(0, loc)] = loc;
|
|
|
|
|
|
|
|
cnt_send = 0;
|
|
|
|
Array<int> verts;
|
|
|
|
for (int face = 1; face <= nfa; face++)
|
|
|
|
{
|
|
|
|
topology.GetFaceVertices (face, verts);
|
|
|
|
for (int dest = 1; dest < ntasks; dest++)
|
|
|
|
if (IsExchangeVert (dest, verts[0]) &&
|
|
|
|
IsExchangeVert (dest, verts[1]) &&
|
|
|
|
IsExchangeVert (dest, verts[2]))
|
|
|
|
{
|
|
|
|
cnt_send[dest-1]+=2;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
TABLE<int> send_faces(cnt_send);
|
|
|
|
for (int face = 1; face <= nfa; face++)
|
|
|
|
{
|
|
|
|
topology.GetFaceVertices (face, verts);
|
|
|
|
for (int dest = 1; dest < ntasks; dest++)
|
|
|
|
{
|
|
|
|
if (IsExchangeVert (dest, verts[0]) &&
|
|
|
|
IsExchangeVert (dest, verts[1]) &&
|
|
|
|
IsExchangeVert (dest, verts[2]))
|
|
|
|
{
|
|
|
|
send_faces.Add (dest-1, GetDistantFaceNum(0, face));
|
|
|
|
send_faces.Add (dest-1, face);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
TABLE<int> recv_faces(ntasks-1);
|
|
|
|
MyMPI_ExchangeTable (send_faces, recv_faces, MPI_TAG_MESH+8, MPI_HIGHORDER_COMM);
|
|
|
|
|
|
|
|
// *testout << "send exchange faces: " << send_faces << endl;
|
|
|
|
// *testout << "recv exchange faces: " << recv_faces << endl;
|
|
|
|
|
|
|
|
for (int sender = 1; sender < ntasks; sender ++)
|
|
|
|
if (id != sender)
|
|
|
|
{
|
|
|
|
FlatArray<int> recvarray = recv_faces[sender-1];
|
|
|
|
|
|
|
|
for (int ii = 0; ii < recvarray.Size(); )
|
|
|
|
{
|
|
|
|
int globf = recvarray[ii++];
|
|
|
|
int distf = recvarray[ii++];
|
|
|
|
int locf = glob2loc[globf];
|
|
|
|
|
|
|
|
// *testout << "set distant face, sender = " << sender << ", locf = " << locf << "; distf = " << distf << endl;
|
|
|
|
if (locf != -1)
|
|
|
|
SetDistantFaceNum (sender, locf, distf);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
/*
|
2011-02-15 21:22:05 +05:00
|
|
|
sendarray.SetSize (0);
|
|
|
|
recvarray.SetSize (0);
|
|
|
|
|
|
|
|
// exchange faces
|
|
|
|
for (int face = 1; face <= nfa; face++)
|
|
|
|
if (IsExchangeFace (face) )
|
|
|
|
{
|
|
|
|
sendarray.Append (GetDistantFaceNum (0, face));
|
|
|
|
sendarray.Append (face);
|
|
|
|
}
|
|
|
|
|
|
|
|
glob2loc.SetSize (nfaglob);
|
|
|
|
glob2loc = -1;
|
|
|
|
|
|
|
|
for (int loc = 1; loc <= nfa; loc++)
|
|
|
|
if (IsExchangeFace (loc) )
|
|
|
|
glob2loc[GetDistantFaceNum(0, loc)] = loc;
|
|
|
|
|
|
|
|
for (int sender = 1; sender < ntasks; sender ++)
|
|
|
|
{
|
|
|
|
if (id == sender)
|
|
|
|
MyMPI_Bcast (sendarray, sender-1, MPI_HIGHORDER_COMM);
|
|
|
|
else
|
|
|
|
{
|
|
|
|
MyMPI_Bcast (recvarray, sender-1, MPI_HIGHORDER_COMM);
|
|
|
|
for (int ii = 0; ii < recvarray.Size(); )
|
|
|
|
{
|
|
|
|
int globf = recvarray[ii++];
|
|
|
|
int distf = recvarray[ii++];
|
|
|
|
int locf = glob2loc[globf];
|
|
|
|
|
|
|
|
if (locf != -1)
|
|
|
|
SetDistantFaceNum (sender, locf, distf);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
2011-07-15 03:36:19 +06:00
|
|
|
*/
|
2011-02-15 21:22:05 +05:00
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
NgProfiler::StopTimer (timerf);
|
2011-02-15 21:22:05 +05:00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
#ifdef OLD
|
|
|
|
// BitArray recvface(nfa);
|
|
|
|
// recvface.Clear();
|
|
|
|
for (int fa = 1; fa <= nfa; fa++ )
|
|
|
|
{
|
|
|
|
if ( !IsExchangeFace ( fa ) ) continue;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
Array<int> edges, pnums;
|
|
|
|
int globfa = GetDistantFaceNum (0, fa);
|
|
|
|
|
|
|
|
topology.GetFaceEdges (fa, edges);
|
|
|
|
topology.GetFaceVertices (fa, pnums);
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
// send :
|
2011-02-15 21:22:05 +05:00
|
|
|
// localfacenum globalfacenum np ned globalpnums localpnums
|
2009-01-26 00:37:14 +05:00
|
|
|
// localedgenums mit globalv1, globalv2
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
sendarray.Append ( fa );
|
|
|
|
sendarray.Append ( globfa );
|
|
|
|
sendarray.Append ( pnums.Size() );
|
|
|
|
sendarray.Append ( edges.Size() );
|
|
|
|
|
|
|
|
for (int i = 0; i < pnums.Size(); i++ )
|
|
|
|
sendarray.Append( GetLoc2Glob_Vert(pnums[i]) );
|
|
|
|
|
2009-01-26 00:37:14 +05:00
|
|
|
for ( int i = 0; i < pnums.Size(); i++ )
|
2011-02-15 21:22:05 +05:00
|
|
|
sendarray.Append(pnums[i]);
|
|
|
|
|
2009-01-26 00:37:14 +05:00
|
|
|
for ( int i = 0; i < edges.Size(); i++ )
|
|
|
|
{
|
2011-02-15 21:22:05 +05:00
|
|
|
sendarray.Append(edges[i]);
|
2009-01-26 00:37:14 +05:00
|
|
|
int v1, v2;
|
2011-02-15 21:22:05 +05:00
|
|
|
topology.GetEdgeVertices ( edges[i], v1, v2 );
|
2009-01-26 00:37:14 +05:00
|
|
|
int dv1 = GetLoc2Glob_Vert ( v1 );
|
|
|
|
int dv2 = GetLoc2Glob_Vert ( v2 );
|
2011-02-15 21:22:05 +05:00
|
|
|
sendarray.Append ( dv1 );
|
|
|
|
sendarray.Append ( dv2 );
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
BitArray edgeisinit(ned), vertisinit(np);
|
|
|
|
edgeisinit.Clear();
|
|
|
|
vertisinit.Clear();
|
|
|
|
|
|
|
|
// Array for temporary use, to find local from global element fast
|
|
|
|
// only for not too big meshes
|
|
|
|
// seems ok, as low-order space is treated on one proc
|
2011-02-15 21:22:05 +05:00
|
|
|
Array<int,1> glob2locfa (nfaglob);
|
|
|
|
glob2locfa = -1;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for (int locfa = 1; locfa <= nfa; locfa++)
|
|
|
|
if (IsExchangeFace (locfa) )
|
|
|
|
glob2locfa[GetDistantFaceNum(0, locfa)] = locfa;
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
for (int sender = 1; sender < ntasks; sender ++)
|
|
|
|
{
|
|
|
|
if (id == sender)
|
|
|
|
MyMPI_Bcast (sendarray, sender-1, MPI_HIGHORDER_COMM);
|
|
|
|
else
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
2011-02-15 21:22:05 +05:00
|
|
|
MyMPI_Bcast ( recvarray, sender-1, MPI_HIGHORDER_COMM);
|
2009-01-26 00:37:14 +05:00
|
|
|
// compare received vertices with own ones
|
|
|
|
int ii = 0;
|
|
|
|
int cntel = 0;
|
|
|
|
int locfa = 1;
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
while (ii < recvarray.Size())
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
|
|
|
// receive list :
|
2011-02-15 21:22:05 +05:00
|
|
|
// distant_facenum global_facenum np ned globalpnums distant_pnums
|
2009-01-26 00:37:14 +05:00
|
|
|
// distant edgenums mit globalv1, globalv2
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
int distfa = recvarray[ii++];
|
|
|
|
int globfa = recvarray[ii++];
|
|
|
|
int distnp = recvarray[ii++];
|
|
|
|
int distned =recvarray[ii++];
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
int locfa = (glob2locfa) [globfa];
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
if ( locfa == -1 )
|
|
|
|
{
|
|
|
|
ii += 2*distnp + 3*distned;
|
|
|
|
locfa = 1;
|
|
|
|
continue;
|
|
|
|
}
|
|
|
|
|
|
|
|
Array<int> edges;
|
|
|
|
int fa = locfa;
|
|
|
|
|
|
|
|
Array<int> pnums, globalpnums;
|
|
|
|
topology.GetFaceEdges ( fa, edges );
|
|
|
|
topology.GetFaceVertices ( fa, pnums );
|
|
|
|
|
|
|
|
globalpnums.SetSize ( distnp );
|
|
|
|
for ( int i = 0; i < distnp; i++)
|
|
|
|
globalpnums[i] = GetLoc2Glob_Vert ( pnums[i] );
|
|
|
|
|
|
|
|
SetDistantFaceNum ( sender, fa, distfa );
|
|
|
|
|
|
|
|
// find exchange points
|
|
|
|
for ( int i = 0; i < distnp; i++)
|
|
|
|
{
|
2011-02-15 21:22:05 +05:00
|
|
|
int distglobalpnum = recvarray[ii+i];
|
2009-01-26 00:37:14 +05:00
|
|
|
for ( int j = 0; j < distnp; j++ )
|
|
|
|
if ( globalpnums[j] == distglobalpnum )
|
|
|
|
{
|
|
|
|
// set sender -- distpnum ---- locpnum
|
2011-02-15 21:22:05 +05:00
|
|
|
int distpnum = recvarray[ii + i +distnp];
|
|
|
|
// SetDistantPNum ( sender, pnums[j], distpnum );
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
}
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
Array<int> distedgenums(distned);
|
2009-01-26 00:37:14 +05:00
|
|
|
// find exchange edges
|
|
|
|
for ( int i = 0; i < edges.Size(); i++)
|
|
|
|
{
|
|
|
|
int v1, v2;
|
|
|
|
topology . GetEdgeVertices ( edges[i], v1, v2 );
|
|
|
|
int dv1 = GetLoc2Glob_Vert ( v1 );
|
|
|
|
int dv2 = GetLoc2Glob_Vert ( v2 );
|
|
|
|
if ( dv1 > dv2 ) swap ( dv1, dv2 );
|
|
|
|
for ( int ed = 0; ed < distned; ed++)
|
|
|
|
{
|
2011-02-15 21:22:05 +05:00
|
|
|
distedgenums[ed] = recvarray[ii + 2*distnp + 3*ed];
|
|
|
|
int ddv1 = recvarray[ii + 2*distnp + 3*ed + 1];
|
|
|
|
int ddv2 = recvarray[ii + 2*distnp + 3*ed + 2];
|
2009-01-26 00:37:14 +05:00
|
|
|
if ( ddv1 > ddv2 ) swap ( ddv1, ddv2 );
|
|
|
|
if ( dv1 == ddv1 && dv2 == ddv2 )
|
|
|
|
{
|
|
|
|
// set sender -- distednum -- locednum
|
|
|
|
SetDistantEdgeNum ( sender, edges[i], distedgenums[ed] );
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
|
|
|
ii += 2*distnp + 3*distned;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
}
|
2011-02-15 21:22:05 +05:00
|
|
|
#endif
|
2009-01-26 00:37:14 +05:00
|
|
|
|
|
|
|
|
|
|
|
// set which elements are where for the master processor
|
|
|
|
|
|
|
|
coarseupdate = 1;
|
2011-07-15 03:36:19 +06:00
|
|
|
MPI_Barrier (MPI_COMM_WORLD);
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
void ParallelMeshTopology :: UpdateTopology ()
|
|
|
|
{
|
|
|
|
const MeshTopology & topology = mesh.GetTopology();
|
|
|
|
int nfa = topology.GetNFaces();
|
|
|
|
int ned = topology.GetNEdges();
|
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
/*
|
2009-01-26 00:37:14 +05:00
|
|
|
isghostedge.SetSize(ned);
|
|
|
|
isghostface.SetSize(nfa);
|
|
|
|
isghostedge.Clear();
|
|
|
|
isghostface.Clear();
|
|
|
|
|
|
|
|
for ( int ed = 1; ed <= ned; ed++)
|
|
|
|
{
|
|
|
|
int v1, v2;
|
|
|
|
topology.GetEdgeVertices ( ed, v1, v2 );
|
|
|
|
if ( IsGhostVert(v1) || IsGhostVert(v2) )
|
|
|
|
SetGhostEdge ( ed );
|
|
|
|
}
|
2011-07-15 03:36:19 +06:00
|
|
|
*/
|
2009-01-26 00:37:14 +05:00
|
|
|
|
2011-07-15 03:36:19 +06:00
|
|
|
/*
|
2009-01-26 00:37:14 +05:00
|
|
|
Array<int> pnums;
|
|
|
|
for ( int fa = 1; fa <= nfa; fa++)
|
|
|
|
{
|
|
|
|
topology.GetFaceVertices ( fa, pnums );
|
|
|
|
for ( int i = 0; i < pnums.Size(); i++)
|
|
|
|
if ( IsGhostVert( pnums[i] ) )
|
|
|
|
{
|
|
|
|
SetGhostFace ( fa );
|
|
|
|
break;
|
|
|
|
}
|
|
|
|
}
|
2011-07-15 03:36:19 +06:00
|
|
|
*/
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
void ParallelMeshTopology :: SetNV ( const int anv )
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
|
|
|
*testout << "called setnv" << endl
|
|
|
|
<< "old size: " << loc2distvert.Size() << endl
|
|
|
|
<< "new size: " << anv << endl;
|
|
|
|
|
|
|
|
loc2distvert.ChangeSize (anv);
|
|
|
|
for (int i = 1; i <= anv; i++)
|
|
|
|
if (loc2distvert.EntrySize(i) == 0)
|
|
|
|
loc2distvert.Add (i, -1); // will be the global nr
|
|
|
|
|
|
|
|
nv = anv;
|
|
|
|
}
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
void ParallelMeshTopology :: SetNE ( const int ane )
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
|
|
|
loc2distel.ChangeSize (ane);
|
|
|
|
for (int i = 0; i < ane; i++)
|
2011-07-15 03:36:19 +06:00
|
|
|
if (loc2distel[i].Size() == 0)
|
|
|
|
loc2distel.Add (i, -1); // will be the global nr
|
2009-01-26 00:37:14 +05:00
|
|
|
ne = ane;
|
|
|
|
}
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
void ParallelMeshTopology :: SetNSE ( int anse )
|
2009-01-26 00:37:14 +05:00
|
|
|
{
|
|
|
|
loc2distsurfel.ChangeSize (anse);
|
|
|
|
for (int i = 0; i < anse; i++)
|
|
|
|
if (loc2distsurfel[i].Size() == 0)
|
|
|
|
loc2distsurfel.Add (i, -1); // will be the global nr
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
nsurfel = anse;
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
void ParallelMeshTopology :: SetNSegm ( int anseg )
|
|
|
|
{
|
|
|
|
loc2distsegm.ChangeSize (anseg);
|
|
|
|
for (int i = 0; i < anseg; i++)
|
|
|
|
if (loc2distsegm[i].Size() == 0)
|
2009-01-26 00:37:14 +05:00
|
|
|
loc2distsegm.Add (i, -1); // will be the global nr
|
|
|
|
|
2011-02-15 21:22:05 +05:00
|
|
|
nseg = anseg;
|
2009-01-26 00:37:14 +05:00
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
#endif
|