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496 Commits

Author SHA1 Message Date
Joachim Schöberl
90d4c94028 make Topology a member of Mesh (rather then pointer) to reduce number of pointer dereferencing steps. This required move operators for Array and Table. 2017-02-25 19:48:37 +01:00
Joachim Schöberl
c143aafaea Array resize checks for trivially copyable 2017-02-24 22:29:57 +01:00
Christopher Lackner
89fe31b550 Squashed commit of the following: 
commit fa556baaa222ba349d534027f7203588dcda6ad8
Author: Christopher Lackner <christopher.lackner@tuwien.ac.at>
Date:   Thu Feb 23 15:56:47 2017 +0100

    add python path to docker template

commit 54eb7eedc77ad8c86952c347536e7e1a854b62ed
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Thu Feb 23 14:59:45 2017 +0100

    install pytest in docker images

commit 3c1c755891e8372762130a6ed8c39cf056430264
Author: Matthias Hochsteger <matthias.hochsteger@tuwien.ac.at>
Date:   Thu Feb 23 14:52:32 2017 +0100

    enable CTest properly, add pytest

commit 4c4cf229ab8e7fd6057f535fb05c3079a9278f80
Author: Christopher Lackner <christopher.lackner@tuwien.ac.at>
Date:   Thu Feb 23 14:02:13 2017 +0100

    fix write splinesurface to savemesh

commit 069fbdbc529c9dd91644663f3f365e08be5af70e
Author: Christopher Lackner <christopher.lackner@tuwien.ac.at>
Date:   Thu Feb 23 09:03:26 2017 +0100

    fix lifetime of SplineSurface
 2017-02-23 16:41:27 +01:00
Matthias Hochsteger
002a2cba6b Fix (or work around?) strange bug on Windows 
The definition of std::max uses references for parameters, which leads
to unnecessary storing of constants on the stack. If the stack is
overwritten this leads to wrong results.
max2() works around this using call-by-value.
 2017-02-16 09:12:45 +01:00
Joachim Schöberl
cd314e2f45 few more inline functions 2017-02-15 22:31:24 +01:00
Joachim Schöberl
e190943f4f change bc-names 2017-02-09 10:06:34 +01:00
Joachim Schöberl
fd3d3e28e6 fix warning 2017-02-04 07:48:48 +01:00
Matthias Hochsteger
fa9d918963 Apply patches for OpenCasCade 7 by Lorenz Lechner 
see b443cbdb13/patches
 2017-01-31 19:21:25 +01:00
Joachim Schöberl
52517218c9 Merge branch 'elofpoint-tol' into 'master' 
Use tolerance in GetElementOfPoint when using a search tree

I'm getting artifacts at domain edges (see attached), because no tolerance is used when calling `elementsearchtree->GetIntersecting()` inside `GetElementOfPoint`.

![searchtree](/uploads/5aa10da74cac7bef9e134756ea897e49/searchtree.png)

See merge request !29
 2017-01-25 21:25:52 +01:00
Matthias Hochsteger
4cff6b546a install all headers to INCDIR 2017-01-16 14:59:57 +01:00
Alexander Schlüter
60768cf9c5 use tolerance in GetElementOfPoint when using a search tree 2017-01-12 21:09:07 +01:00
Matthias Hochsteger
190d035809 Fix Python paths 2017-01-09 18:45:12 +01:00
Joachim Schöberl
f44a32e4de Merge branch 'pointoutofquad' into 'master' 
point out of quad fix

Now the error "point out of domain" does not appear any more, but the values are wrong. [pointoutofquad.py](/uploads/91e142ab369491ac5a4e4a8d9c93d671/pointoutofquad.py)

See merge request !28
 2017-01-06 22:16:53 +01:00
Joachim Schöberl
d1de4a7cf9 Introduce NetgenGeometry base class to Python. export meshing first, then csg 2017-01-05 05:08:24 +01:00
Michael Neunteufel
3e9ad94307 point out of quad fix 2017-01-02 11:06:36 +01:00
Joachim Schöberl
9790774b49 change to SurfaceElementIndex 2016-12-15 13:05:34 +01:00
Christoph Lehrenfeld
5a940b0b13 Compress and DeleteSurfaceElements 2016-12-14 13:28:13 +01:00
Joachim Schöberl
775d998235 don't be so strict with deprecated 2016-12-12 23:08:22 +01:00
Joachim Schöberl
54aa508fb6 fix 0/1 base 2016-12-12 23:01:21 +01:00
Joachim Schöberl
d6b16870fa PointIndex::BASE = 0 and STL, PointIndices 2016-12-12 11:47:46 +01:00
Joachim Schöberl
be1e6e160b PointIndex::BASE = 0 working for CSG 2016-12-11 20:17:07 +01:00
Joachim Schöberl
59dc0b6c6a Array::Append does not return size anymore ( will be changed to last ) 2016-12-11 18:22:07 +01:00
Joachim Schöberl
bdbc415589 more use of PointIndex 2016-12-11 18:02:16 +01:00
Joachim Schöberl
4c32c2ac25 more use of PointIndex 2016-12-11 12:12:05 +01:00
Joachim Schöberl
e4a6d127fd dont't store orientation of edges and faces. This gives a unified memory layout for edges and faces and allows to access facets without copying (in 2D and 3D) 2016-12-10 19:02:13 +01:00
Christopher Lackner
8870108846 Merge branch 'master' into mesh_only_one_domain 2016-12-09 16:36:50 +01:00
Joachim Schöberl
a423258f54 Merge branch 'genmesh_firststep_as_meshingparam' into 'master' 
Genmesh laststep as meshingparam



See merge request !23
 2016-12-07 20:01:54 +01:00
Joachim Schöberl
bb85bb01a3 quads are curved (in general) 2016-12-06 21:54:51 +01:00
Christopher Lackner
9f9a5e4304 fix typo 2016-12-06 13:38:18 +01:00
Christopher Lackner
7743503c1d fix and use in swapimprove as well 2016-12-06 11:32:16 +01:00
Christopher Lackner
1f314ae0ee fix wrong order of arguments 2016-12-05 15:37:05 +01:00
Christopher Lackner
181eea5038 typo fix 2016-12-05 15:10:34 +01:00
Christopher Lackner
dc3a214994 merge endMeshStep 2016-12-05 15:08:25 +01:00
Christopher Lackner
16ecf99cce remove onlySurface again (use MeshingSteps instead) 2016-12-05 14:59:44 +01:00
Christopher Lackner
bd39b8df88 export enum MeshingStep 2016-12-05 14:39:09 +01:00
Christopher Lackner
f582c7935f remove perfstepsstart from python interface 2016-12-05 14:31:12 +01:00
Christopher Lackner
7e4892a9e7 firststep and laststep as meshingparameters to be exported to python 2016-12-05 13:50:21 +01:00
Christopher Lackner
a0326d490d some fixes 2016-12-05 13:15:06 +01:00
Christopher Lackner
ee833ff362 add onlySurface to generate only surface mesh 2016-12-02 19:00:34 +01:00
Christopher Lackner
0d36c69c25 domainwise meshing and optimization enabled 2016-12-02 14:59:59 +01:00
Michael Neunteufel
f65651ce0e bug fix PointContainedIn2DElement 2016-11-27 19:25:25 +01:00
Joachim Schöberl
5b3eb4077a fix create vol-element (thx Astrid) 2016-11-23 20:44:52 +01:00
Matthias Hochsteger
ee4d5e89d8 remove unnecessary files (mostly unsupported build systems) 2016-11-23 18:07:14 +01:00
Joachim Schöberl
f70edcb247 Merge branch 'quickfix_1d_index' into 'master' 
export edgenr to python as well



See merge request !21
 2016-11-22 10:55:33 +01:00
Christopher Lackner
61e13dbc8b remove edgenr at constructor 2016-11-21 16:35:46 +01:00
Christopher Lackner
02fd6d2712 export edgenr to python as well 2016-11-21 14:54:11 +01:00
Joachim Schöberl
0edd570990 parallel clusters 2016-11-20 19:55:17 +01:00
Joachim Schöberl
9014669c56 timer 2016-11-20 19:30:50 +01:00
Joachim Schöberl
467d3a01be no testout in bisect 2016-11-20 18:36:00 +01:00
Christopher Lackner
e7e90d1a68 cd2names to python export 2016-11-18 16:57:42 +01:00
Gerhard Kitzler
5d1e131c53 Merge branch 'master' into remove_tix2 2016-11-17 14:44:28 +01:00
Gerhard Kitzler
9eee23693e Merge branch 'master' into remove_tix2 2016-11-16 20:15:33 +01:00
Gerhard Kitzler
c4a1128e79 Small Fixes 2016-11-16 16:13:17 +01:00
Christopher Lackner
3d80b48a7a Merge branch 'master' into codim2integrals 2016-11-16 12:15:55 +01:00
Christopher Lackner
0a9abc1acc array iterator to python 2016-11-15 18:12:51 +01:00
Matthias Hochsteger
7fb6a57e90 Revert "Export Ngx_Mesh to Python" 
This reverts commit 9b235b4388.
 2016-11-10 15:36:47 +01:00
Matthias Hochsteger
9b235b4388 Export Ngx_Mesh to Python 2016-11-09 17:18:01 +01:00
Christopher Lackner
2122a954aa merge pybind11 2016-11-05 17:15:16 +01:00
Joachim Schöberl
fe356ab3ca 0 to py::int_ conversion 2016-11-04 14:55:15 +01:00
Matthias Hochsteger
96c1235184 switch from boost::python to pybind11 2016-11-04 12:14:52 +01:00
Christopher Lackner
2d77b35b39 merge master 2016-10-31 15:37:02 +01:00
Christopher Lackner
e28753431e merge master into branch 2016-10-31 15:10:12 +01:00
Christopher Lackner
767b819e5d python cd2 functionality, mesh scaling 2016-10-28 16:49:50 +02:00
Christoph Wintersteiger
8756aabd3c add identification for 1d meshes, used for periodic boundary conditions 2016-10-21 16:01:46 +02:00
Joachim Schöberl
b5571213f4 meshing parameters to vol-meshing 2016-10-20 13:19:24 +02:00
Christopher Lackner
a6ea18d07d fix bboundary condition numbering 2016-10-17 17:31:09 +02:00
Christopher Lackner
ccde47d2c0 added multielementtransformation 2016-10-16 09:45:16 +02:00
Christopher Lackner
b8bf194fcf some changes 2016-10-11 14:10:36 +02:00
Christopher Lackner
6134717796 setting bboundary names 2016-10-05 19:48:18 +02:00
Christopher Lackner
a4fe0c1c41 first push 2016-10-04 19:30:57 +02:00
Joachim Schöberl
ff84375089 local mesh-size in MeshingParameters via Python 2016-09-29 16:44:16 +02:00
Joachim Schöberl
d7a5f44c39 remove timer 2016-09-26 19:10:57 +02:00
Joachim Schöberl
6c44a273ce more options 2016-09-07 09:00:39 +02:00
Matthias Hochsteger
1ce39a7c56 export FaceDescriptor::SetSurfaceColor 2016-08-25 17:18:27 +02:00
Joachim Schöberl
ecb7dd5dae build edges in parallel 2016-08-22 07:41:11 +02:00
Joachim Schöberl
20ea4a9e44 restructure build-edges 2016-08-22 06:47:50 +02:00
Joachim Schöberl
9c97eb5252 fix for quad-faces 2016-08-18 18:01:25 +02:00
Joachim Schöberl
a54a40a771 fix build-faces for 2D 2016-08-18 11:49:59 +02:00
Joachim Schöberl
5413493c64 vertex2pointelement ... 0 based 2016-08-18 09:50:11 +02:00
Joachim Schöberl
a7b413944d more ParallelFor in update topology 2016-08-18 08:00:47 +02:00
Joachim Schöberl
e009a8b687 started task-manager in netgen (topology) 2016-08-18 00:49:47 +02:00
Gerhard Kitzler
05add9530d Fixed index issue for 0D elements in topology 2016-08-17 17:17:23 +02:00
Joachim Schöberl
f5a9991d24 0-dim elements in topology 2016-08-17 14:51:24 +02:00
Gerhard Kitzler
982fee589e Merge branch 'master' of data.asc.tuwien.ac.at:jschoeberl/netgen 2016-08-11 17:29:38 +02:00
Gerhard Kitzler
a18ac184b2 Python support for PRISM 2016-08-11 17:28:55 +02:00
Matthias Hochsteger
3a70d212fb fix alignment issue for SIMD code 2016-08-10 19:30:09 +02:00
Joachim Schöberl
5448157842 use SIMD also for AVX (not only AVX2) 2016-08-07 19:13:36 +02:00
Joachim Schöberl
6c0c30104a don't need fix for boost > 1.60 2016-08-07 12:34:56 +02:00
Christopher Lackner
a1496ea645 property 2016-08-06 13:15:21 +02:00
Christopher Lackner
17c4ce6182 getitem MeshPoint 2016-08-06 12:55:59 +02:00
Joachim Schöberl
b53eedbab6 fix for curved elements order=1 (thx Alexander Schlüter) 2016-07-16 16:00:52 +02:00
Matthias Hochsteger
80a2c61336 Merge branch 'simdtrafo' into 'master' 
Simdtrafo

element - trafo for simd-points is working (2d, 3d, surfaces)

See merge request !4
 2016-07-13 11:11:30 +02:00
Joachim Schöberl
5681d9c00a added missing template instantiation 2016-07-11 18:39:10 +02:00
Joachim Schöberl
423c4c6ac5 simd-mapping also for 2D 2016-07-11 18:27:44 +02:00
Matthias Hochsteger
ce0cefebe7 missing semicolon 2016-07-11 15:54:51 +02:00
Joachim Schöberl
e1f7a5f5f2 low memory operations 2016-07-11 14:55:35 +02:00
Joachim Schöberl
60063f711f export mesh from python 2016-07-10 18:07:36 +02:00
Joachim Schöberl
86fdb04687 templated and instantiated CalcShape 2016-07-07 18:31:09 +02:00
Joachim Schöberl
416addf076 instantiation and fixes of SIMD - function 2016-07-07 17:58:13 +02:00
Joachim Schöberl
ffb5a8c8da evaluate curved element mapping without storing shape functions 2016-07-07 15:29:07 +02:00
Joachim Schöberl
8414cb2d60 using simds for element-trafo, added type-template to many classes 2016-07-06 17:12:57 +01:00
Joachim Schöberl
7bdde3ef85 orient tets for fem-tp 2016-05-15 19:18:27 +02:00
Joachim Schöberl
a53149131e order elements (for TP) 2016-05-13 12:06:20 +02:00
Joachim Schöberl
0e32696492 Merge branch 'bernd/tet_splitting' into 'master' 
Tet splitting

`Refinement - Split to Tets` works now for me with this change.
I'm unsure, if this introduces any other bugs.

See merge request !3
 2016-05-10 13:38:49 +02:00
Bernd Schwarzenbacher
00e9160821 Use different approach for fixing tet splitting 
Revert changes in GetSurfaceElementsOfFace
 2016-05-09 15:33:58 +02:00
Joachim Schöberl
0c803d5175 Merge branch 'master' of gitlab.asc.tuwien.ac.at:jschoeberl/netgen 2016-05-09 12:54:20 +02:00
Joachim Schöberl
3226d8c2c2 find point in quad surface-element 2016-05-09 12:54:08 +02:00
Christoph Lehrenfeld
7078fc999e [mesh] set/get geometry 2016-05-09 09:48:33 +02:00
Bernd Schwarzenbacher
c5e2ce2d37 Change for functioning tet splitting 2016-05-06 14:31:36 +02:00
Joachim Schöberl
055031ce0d store geometry with mesh, if available 2016-05-06 07:30:59 +02:00
Joachim Schöberl
1d9f0ae95c exporting searchtree 2016-05-05 21:27:21 +02:00
Joachim Schöberl
51fd3aa497 fix curved pyramids 2016-04-30 07:22:26 +02:00
Joachim Schöberl
5c0e80e473 fixed Jacobians for curved hexes 2016-04-20 08:52:05 +02:00
Joachim Schöberl
8350a88daf fixes for hex-filling 2016-04-20 08:11:59 +02:00
Joachim Schöberl
392eee9177 calling element-trafo with avx-types 2016-04-10 06:36:05 +02:00
Joachim Schöberl
7dc7e540c9 remove timer 2016-04-05 21:53:49 +02:00
Joachim Schöberl
05106cf58b hex-filling of thin domains (first steps ...) 2016-04-05 17:15:39 +02:00
Joachim Schöberl
16c6ae5865 hex-filling of thin domains (first steps ...) 2016-04-05 14:27:51 +02:00
Matthias
ad6785731f OpenCascade for Windows 2016-04-04 10:18:38 +02:00
Joachim Schöberl
d2fd708600 fix bcname from recent commit 2016-03-24 00:52:02 +01:00
Joachim Schöberl
3057076eaf bcname inline 2016-03-23 23:13:05 +01:00
Joachim Schöberl
21199b565a getvertexelements inline 2016-03-23 08:17:45 +01:00
Joachim Schöberl
9dc8aa9ffb fix materials in SaveMesh 2016-03-22 13:00:20 +01:00
Joachim Schöberl
bee6c6bf90 consistent vertex->elements (1D/2D/3D) tables 2016-03-22 07:28:11 +01:00
Joachim Schoeberl
32e392aec7 optimization of parallel topology 2016-03-07 22:25:53 +01:00
Joachim Schoeberl
d162b217c9 parallel refinement 2016-02-29 21:33:29 +01:00
Joachim Schoeberl
e17b2a4cd5 master shouldn't refine 2016-02-29 13:14:16 +01:00
Joachim Schoeberl
5994bf798d fixes for parallel refinement 2016-02-29 12:25:24 +01:00
Joachim Schöberl
4dad700c87 tuning and output for uniform refinement 2016-02-29 11:24:07 +01:00
Joachim Schöberl
fcac89f793 identify edges 2016-02-28 14:00:41 +01:00
Joachim Schoeberl
2e6f7850d7 parallel refinement 2016-02-28 12:21:36 +01:00
Joachim Schöberl
fbb7071939 parallel refinement 2016-02-28 08:11:34 +01:00
Joachim Schöberl
3e82f61424 parallel refinement 2016-02-28 06:06:08 +01:00
Joachim Schoeberl
ee6fbe65e7 parallel refinement 2016-02-28 06:05:19 +01:00
Joachim Schöberl
bcbc4294bc update parallel topology 2016-02-28 05:50:15 +01:00
Joachim Schöberl
9ef2028729 parallel update 2016-02-28 05:32:08 +01:00
Joachim Schöberl
346e3db54d parallel update 2016-02-28 05:24:26 +01:00
Joachim Schoeberl
aa4c3e8ac7 load and dist mesh via python 2016-02-26 20:35:27 +01:00
Joachim Schöberl
b3591f829a python - element has material name 2016-02-26 20:30:40 +01:00
Joachim Schöberl
1ac9c02f5b lexicographic ordering for uni-form mesh refinement 2016-02-26 20:29:14 +01:00
Joachim Schöberl
b911ab22d7 fixes for bisect 2016-02-26 12:22:00 +01:00
Joachim Schöberl
938cbbcc1d remove some clang - warnings 2016-02-23 18:22:00 +01:00
Matthias Hochsteger
1b4f596446 get rid of OpenMP 2016-02-22 18:44:00 +01:00
Matthias Hochsteger
0db3dc8c54 use idxtype instead of int for metis 2016-02-16 19:04:08 +01:00
Joachim Schöberl
d0ba57fd3a non-constant Jacobians for non-simplicials 2016-02-16 07:34:08 +01:00
Joachim Schöberl
c98a55ab11 merge ttk branch to master 2016-02-08 15:53:16 +01:00
Joachim Schöberl
6ab4195c8d fix bug found by Evan VanderZee 2016-01-30 21:57:40 +01:00
Matthias Hochsteger
2a2b728d55 fix typo 2016-01-29 15:29:03 +01:00
Matthias Hochsteger
da7cd7c0ad remove warnings for boost::python < 1.60 2016-01-29 15:23:58 +01:00
Matthias Hochsteger
fc50af5462 boost::python 1.60 fixes 2016-01-29 15:04:57 +01:00