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702 Commits

Author SHA1 Message Date
Lukas
a386ca46d9 delete local memory after redistributing mesh on master. GetElementOfPoint behaves correctly for empty meshes 2019-04-15 17:49:45 +02:00
Joachim Schöberl
e220a252d1 fixes for tet10 and trig6 elements (is_curved, clipping-plane vis) 2019-04-14 07:55:38 +02:00
Christopher Lackner
3b605c9a14 archive numvertices so that secondorder mesh is pickled correctly 2019-04-11 13:57:14 +02:00
Joachim Schöberl
2794dda996 copy mesh from py 2019-04-10 14:13:34 +02:00
Christopher Lackner
a6825d18ca build jacobi pols even if mesh is unpickled and buildcurvedelements is 
never called
 2019-04-06 13:40:37 +02:00
Joachim Schöberl
f6a290e44f modernize ComputeNVertices 2019-03-30 14:02:38 +01:00
Matthias Hochsteger
fefddf14cc DLL_HEADER for meshing functions 2019-03-25 14:01:06 +01:00
Joachim Schöberl
dab8c827fe Constructor for Trafo by rotation along an arbitrary axes, combine trafos 2019-03-25 12:33:16 +01:00
Lukas
05518ea796 fix index 1/0 typo 2019-03-20 17:06:57 +01:00
Lukas
9c4cfb7864 use mesh-communicator in another place 2019-02-28 17:48:18 +01:00
Lukas
fc7381e587 topology does not build faces/edges befire distributing 2019-02-28 17:48:18 +01:00
Matthias Hochsteger
10ef58b54b Merge branch 'fix_curve_mpi' into 'master' 
fix rank/ntasks in curvedelems

See merge request jschoeberl/netgen!140
 2019-02-28 16:11:17 +00:00
Lukas
c1256c3ffd fix typo 2019-02-28 16:46:37 +01:00
Lukas
16421b4be3 fix rank/ntasks in curvedelems 2019-02-28 16:25:31 +01:00
Lukas
7346495135 no stack arrays for names 2019-02-28 12:06:30 +01:00
Lukas
039e6d753f simplify distributing names (and also distribute co-dim 2/3 names) 2019-02-26 11:18:42 +01:00
Lukas
965a6cc387 archive co-dim 3 names 2019-02-26 11:18:11 +01:00
Lukas
a2f81d0337 Fix MPI + empty bc/mat-names. (But that should not happen..) 2019-02-25 16:38:21 +01:00
Lukas
4637854c9b When loading a netgen-mesh, take geometry-info from mesh-file over global geometry. 2019-02-25 16:28:31 +01:00
Lukas
55b0fe17d7 use mesh communicator for rank/size 2019-02-25 16:21:04 +01:00
Joachim Schöberl
179c3bb02f don't store partition in element (most times waste of mem) 2019-02-15 21:01:00 +01:00
Joachim Schöberl
fa3f89d337 use std::vector for binding PointIndex, avoid map 2019-02-15 21:00:59 +01:00
Christopher Lackner
eaf08e5c6f import mesh from other file format from python 2019-02-13 22:39:31 +01:00
Joachim Schöberl
67c24a044c get rid of ng_comm 2019-02-12 22:27:58 +01:00
Joachim Schöberl
734e96c87c get rid of ng_comm 2019-02-12 22:11:55 +01:00
Matthias Hochsteger
bc21e34125 Mesh is MPI-local by default 2019-02-12 16:30:18 +01:00
Matthias Hochsteger
c274126487 Don't allow MPI-parallel GUI 2019-02-12 15:04:34 +01:00
Joachim Schöberl
c6d49734fb default ctor for NgMPI_Comm 2019-02-12 08:03:20 +01:00
Joachim Schöberl
e9f352d8f3 order of export 2019-02-11 23:59:32 +01:00
Joachim Schöberl
9b8f273b14 mpiwrapper 2019-02-11 22:12:29 +01:00
Joachim Schöberl
7aa5c536a8 timers 2019-02-11 21:38:05 +01:00
Joachim Schöberl
9ced2f561f mpi_wrapper 2019-02-11 21:37:28 +01:00
Michael Neunteufel
e8f6ca5c1b merge master 2019-02-11 09:16:22 +01:00
Michael Neunteufel
ba26ddd834 Merge remote-tracking branch 'gitlab/master' into get_surface_point 2019-02-11 09:12:09 +01:00
Michael Neunteufel
9d7c851bd9 (hopefully) fixed point in quad for the last time 2019-02-11 09:11:57 +01:00
Joachim Schöberl
9500f8d8f2 handle 2 ranks case 2019-02-08 22:12:00 +01:00
Joachim Schöberl
8a165ef8f1 subcomms 2019-02-08 20:24:54 +01:00
Joachim Schöberl
bab9d41b1b why was SubComm that complicated ? 2019-02-08 17:20:13 +01:00
Joachim Schöberl
f661e4a30d distribute 2019-02-08 14:22:43 +01:00
Joachim Schöberl
bf9cffa8de Merge branch 'getrefinementlevel' into 'master' 
Getrefinementlevel

See merge request jschoeberl/netgen!106
 2019-02-07 15:10:38 +00:00
Christopher Lackner
d5f1076e17 read tet10, pyramid13, prism15 and hex20 from gmsh 2019-02-06 19:13:51 +01:00
Joachim Schöberl
bb64612179 Merge branch 'typo' into 'master' 
Typo and cout

See merge request jschoeberl/netgen!126
 2019-02-06 14:09:13 +00:00
Lukas
8a711031cc replace cout by PrintMessage 2019-02-06 14:35:32 +01:00
Joachim Schöberl
e42f81b5d5 take care of tolerance in searchtree 2019-02-05 09:02:31 +01:00
Lukas
665acf811d fix typo 2019-02-04 13:12:31 +01:00
Joachim Schöberl
1303e92379 modernize Delaunay 2019-02-03 06:20:52 +01:00
Joachim Schöberl
cc732689c2 start modernizing delaunay 2019-02-02 16:24:30 +01:00
Lukas
e880bff515 DLL_HEADER for ng_comm 2019-02-01 16:12:30 +01:00
Joachim Schöberl
17a457c1fc timers 2019-01-31 18:41:20 +01:00
Lukas
214b5c452d Wrap MPI-communicator on netgen side 2019-01-30 21:03:28 +01:00
Lukas
bc77c763ae remove couts 2019-01-30 20:53:03 +01:00
Lukas
ee24e786af use global communicator in python-mesh 2019-01-30 16:44:22 +01:00
Lukas
0f4ca1c7a7 Fewer ifdefs for MPI. More consistent use of mpi_interface instead of direct MPI calls. 2019-01-30 12:09:40 +01:00
Lukas
ff847e6eff Without MPI, the mesh now has dummy-implementations for Distribute, SendRecvMesh, Get- and SetCommunicator. 2019-01-30 11:24:35 +01:00
Lukas
012d27d41e Fix paralleltop. Clean up mesh loading. 2019-01-29 19:37:58 +01:00
Lukas
c7fb6c7e4a Add a global communicator. The mesh now has a communicator. 2019-01-29 16:10:02 +01:00
Christopher Lackner
21ba19bf10 export __getitem__ and __len__ for Vec 2019-01-24 16:13:22 +01:00
Christopher Lackner
05f22e463d add function to automatically create pml layer around convex 2d geometries 2019-01-23 10:35:20 +01:00
Joachim Schöberl
229d1da5ea use Range iterators 2019-01-19 18:06:40 +01:00
Joachim Schöberl
ec0a2a5ae8 quad8 and hex20 geometric elements 2019-01-19 14:29:02 +01:00
Joachim Schöberl
fcaabd38b7 more QUAD8 2019-01-19 14:29:02 +01:00
Joachim Schöberl
b6c58a8d63 more QUAD8 2019-01-19 14:29:02 +01:00
Joachim Schöberl
b6e62f9ebc more QUAD8 2019-01-19 14:29:02 +01:00
Joachim Schöberl
48186fc54d more QUAD8 2019-01-19 14:29:02 +01:00
Joachim Schöberl
bd20d044b1 more QUAD8 2019-01-19 14:29:02 +01:00
Joachim Schöberl
46f53b0d9e more QUAD8 2019-01-19 14:29:02 +01:00
Joachim Schöberl
5776853952 more QUAD8 2019-01-19 14:29:01 +01:00
Joachim Schöberl
ba1463511b more quad8 2019-01-19 14:29:01 +01:00
Joachim Schöberl
66ac2f1a4f hex20 WIP 2019-01-19 14:29:01 +01:00
Matthias Hochsteger
ab15ae12bc [cmake] Export object libs on Windows 2019-01-14 14:47:26 +01:00
Matthias Hochsteger
4aa7e76bd1 MPI-Parallel output of profiler 2019-01-14 13:04:27 +01:00
Matthias Hochsteger
69363e7ff2 Merge remote-tracking branch 'origin/master' into ngcore 2019-01-14 11:13:11 +01:00
Joachim Schöberl
96443e890b timers 2019-01-12 08:19:57 +01:00
Matthias Hochsteger
247b2a2892 [cmake] Replace object libraries with interface libraries 2019-01-08 13:12:24 +01:00
Christopher Lackner
f88cc77cfe move SymbolTable to ngcore 2019-01-02 18:21:52 +01:00
Christopher Lackner
fd3474f5cb logging in ngcore 2018-12-28 13:43:15 +01:00
Christopher Lackner
829defd3eb archive now support python exported objects 2018-12-20 17:01:27 +01:00
Christopher Lackner
099acc9fa1 pickling for all geometry types 2018-12-14 12:01:58 +01:00
Joachim Schöberl
cdd871282e Merge branch 'archive_mesh_curving' into 'master' 
pickle curving of mesh

See merge request jschoeberl/netgen!105
 2018-12-13 17:08:31 +00:00
Christopher Lackner
c5af003bba Merge remote-tracking branch 'gitlab/master' into ngcore 2018-12-13 13:19:40 +01:00
Michael Neunteufel
355eed4818 hp level (should) work now for all singularities in 2D. Maybe also 3D? 2018-12-06 11:23:20 +01:00
Joachim Schöberl
e4d6ff8302 point-sources in 2D 2018-12-04 06:58:12 +01:00
Christopher Lackner
8e29d38fc1 archive works for pointers and shared_ptrs (even with 
mult. inheritance and virtual base classes)
 2018-12-03 16:28:04 +01:00
Christopher Lackner
7bfc48e8f3 start ngcore, archive in there 2018-11-29 18:35:30 +01:00
Christopher Lackner
ec129f6962 fix mesh pickling (if there is no geometry/no curving) 2018-11-22 19:11:49 +01:00
Christopher Lackner
a3d7be7e79 pickle curving of mesh 2018-11-22 16:23:23 +01:00
Joachim Schöberl
361f822316 access 'curved' of 3D elements 2018-11-20 09:36:27 +01:00
Joachim Schöberl
e67c48c094 optimize quad-mapping 2018-11-19 12:41:51 +01:00
Joachim Schöberl
f6a26637de optimization for bilinear quads 2018-11-19 10:57:03 +01:00
Joachim Schöberl
7a4d1f81fc curved attribute 2018-11-17 20:58:08 +01:00
Christopher Lackner
c52cc71a7b seg.cd2i is not set, seg.edgenr is used everywhere else 2018-11-16 11:43:19 +01:00
Christopher Lackner
2dc79a1e04 export get/set status to python 2018-11-06 11:41:04 +01:00
Michael
2a39b426aa add get refinement level function for hp refinement. Works for point singularities 2018-11-05 10:45:33 +01:00
Matthias Hochsteger
b0129d0473 [bugfix] Set element index in CloseSurface() 2018-10-22 17:18:58 +02:00
Michael Neunteufel
1cdc814f4e added BBBND material names 2018-08-07 11:09:03 +02:00
Lukas
47e71acf13 Force segemnts to stick to surface elements in mesh partition. (surf els already stick to cells in 3d) 2018-08-01 10:35:26 +02:00
Lukas
53524579b7 Fixed indention 2018-07-20 14:00:34 +02:00
Lukas
b2ae6210fc removed more output 2018-07-20 13:56:27 +02:00
Lukas
7f424a543a periodic mpi formatted 2018-07-20 13:44:46 +02:00
Lukas
9fd51602b1 less output 2018-07-20 13:29:16 +02:00
Lukas
29cfd7533c Periodic Mesh somewhat working in 2 and 3 dimensions. 2018-07-19 17:33:26 +02:00
Joachim Schöberl
95efdd212d periodic identification doesn't count for prism meshing 2018-06-28 20:54:59 +02:00
Joachim Schöberl
8c56725dcf query coordinate trafo 2018-06-25 19:42:42 +02:00
Joachim Schöberl
c20c2061f4 export SetTransformation 2018-06-25 19:25:17 +02:00
Christopher Lackner
bd58493649 fix for bisection of 2d periodic meshes 2018-06-12 10:08:13 +02:00
Joachim Schöberl
6df972be05 timestamps via interface V2 2018-05-18 21:13:21 +02:00
Joachim Schöberl
aa13a2fbb4 Merge branch 'export_timestamp' into 'master' 
export mesh timestamp to python

See merge request jschoeberl/netgen!84
 2018-05-14 18:52:28 +02:00
Christopher Lackner
375460b75d change timestamp to python private convention 2018-05-14 11:01:27 +02:00
Joachim Schöberl
d9219e6f05 picking geometry with mesh (CSG only by now) 2018-05-12 09:16:02 +02:00
Christopher Lackner
8e73ba68fc export mesh timestamp to python 2018-05-11 10:53:03 +02:00
Joachim Schöberl
66ef426c79 Curve mesh functionality over Ngx_Mesh 2018-05-01 21:20:54 +02:00
Joachim Schöberl
5a320121fd move DoArchive to cpp-file 2018-04-28 12:07:57 +02:00
Joachim Schöberl
0b0616eee8 bug fix table archive 2018-04-28 10:34:46 +02:00
Joachim Schöberl
bda771f86f more archive 2018-04-28 03:42:04 +02:00
Joachim Schöberl
f85b51496f persistent archiving of pointers 2018-04-27 22:34:25 +02:00
Joachim Schöberl
633376972f archiving the mesh 2018-04-27 08:36:22 +02:00
Joachim Schöberl
a985a7bfb1 Merge branch 'curvemanualmeshes' into 'master' 
modify PointBetween for manually generated meshes

See merge request jschoeberl/netgen!83
 2018-04-26 12:31:43 +02:00
Joachim Schöberl
e72d90fcbb Merge branch 'derive_geos_netgengeometry' into 'master' 
derive geometry class in python from NetgenGeometry, gil call guard

See merge request jschoeberl/netgen!82
 2018-04-18 22:00:03 +02:00
Christoph Wintersteiger
ef80db781a modify PointBetween for manually generated meshes 2018-04-18 09:34:41 +02:00
Christopher Lackner
bc520769ba derive geometry class in python from NetgenGeometry, gil call guard 
for generatemesh in 2d
 2018-04-17 19:37:29 +02:00
Christopher Lackner
96f9e01aba release GIL in expensive functions 2018-03-12 22:38:21 +01:00
Joachim Schöberl
07b84024ca enable tables to disable edge/face generation if not needed 2018-03-11 16:28:43 +01:00
Joachim Schöberl
aa8dbac6be export Trafo to py, IdentifyPeriodic with Trafo 2018-03-09 15:29:50 +01:00
Joachim Schöberl
ee7ac2e0a0 fix warnings 2018-03-08 23:47:58 +01:00
Joachim Schöberl
5de403ffd8 py::init constructors 2018-03-08 22:19:11 +01:00
Joachim Schöberl
cf0d3f6682 fix warnings 2018-03-08 21:36:34 +01:00
Christopher Lackner
bdfbf14a39 fix segfault on query non set boundary name in 2D 2018-03-08 14:46:34 +01:00
luz.paz
a10531adb2 Misc. typos 
Found via `codespell -q 3`
 2018-02-06 14:12:24 -05:00
Christopher Lackner
301ba176e5 Python export of second order trigs 2018-01-23 16:45:20 +01:00
Matthias Hochsteger
0b411e1b07 install mydefs.hpp, some DLL_HEADER 
Includes parts of pull request by looooo
https://github.com/NGSolve/netgen/pull/4
 2018-01-23 03:03:47 -08:00
luz.paz
58002505bc Typos 
Found via `codespell`
 2018-01-14 12:18:54 -05:00
Joachim Schöberl
3fffb78a20 more parallel in MeshTopology 2018-01-07 17:33:59 +01:00
Joachim Schöberl
5f2edca91c more parallel in UpdateTopology, optimize Clusters 2018-01-06 18:41:45 +01:00
Joachim Schöberl
19ec4fc9ca more tracing and parallelization 2018-01-04 18:45:07 +01:00
Joachim Schöberl
dca5a01e04 more parallel in topology 2018-01-04 13:00:01 +01:00
Joachim Schöberl
28c7bb27fc include atomic 2018-01-04 12:18:23 +01:00
Joachim Schöberl
789305c3bc more parallelism in netgen-topology 2018-01-04 11:48:45 +01:00
Joachim Schöberl
5469356147 tracer in Netgen 2018-01-04 10:43:34 +01:00
Unknown
afdc1ae85a Misc. typos 
More typo
 2017-12-09 22:21:40 -05:00
Christopher Lackner
bcf5ea67aa GetGeometry from mesh 2017-12-06 14:16:52 +01:00
Joachim Schöberl
38b7c2b8fa added template instantiation 2017-11-24 07:09:28 +01:00
Joachim Schöberl
7cf05d84a8 AVX512 for element-trafos 2017-11-23 21:26:36 +01:00
Joachim Schöberl
1d02f7f104 geometric search tree with hash-table 2017-11-13 11:58:13 +01:00
Joachim Schöberl
af57dd1b72 improve STL makeatlas: searchtree, templetize searchtree 2017-11-10 13:22:20 +01:00
Joachim Schöberl
d02bb9024e fix triangle generation rule (thx to TDM) 2017-11-07 11:36:54 +01:00
Joachim Schöberl
f1917aa2c4 Merge branch 'save_compressed_mesh' into 'master' 
check filename extension when saving a mesh

See merge request !57
 2017-11-06 17:03:31 +01:00
Christoph Wintersteiger
ccc092d2c5 save check of file ending 2017-10-30 13:43:01 +01:00
Joachim Schöberl
712e2c3fb4 Segment array with size_t indexing 2017-10-29 11:31:50 +01:00
Christopher Lackner
2835597c21 export CalcLocalH and SetMaxHDomain to Python 2017-10-12 12:55:07 +02:00
Christoph Wintersteiger
20d6a12192 check extension of filename to ensure that the loading process is successful 2017-09-29 14:47:16 +02:00